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Entry version 102 (16 Oct 2019)
Sequence version 3 (16 Jun 2009)
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Protein

Syntaphilin

Gene

Snph

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Inhibits SNARE complex formation by absorbing free syntaxin-1.By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Syntaphilin
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Snph
Synonyms:Kiaa0374
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2139270 Snph

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei427 – 446HelicalSequence analysisAdd BLAST20

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell junction, Membrane, Synapse, Synaptosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002841371 – 495SyntaphilinAdd BLAST495

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei200PhosphoserineCombined sources1
Modified residuei204PhosphoserineCombined sources1
Modified residuei214PhosphothreonineCombined sources1
Modified residuei219PhosphoserineCombined sources1
Modified residuei235PhosphothreonineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PeptideAtlas

More...
PeptideAtlasi
Q80U23

PRoteomics IDEntifications database

More...
PRIDEi
Q80U23

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q80U23

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q80U23

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q80U23

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000027457 Expressed in 102 organ(s), highest expression level in visual cortex

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q80U23 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q80U23 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Binds to syntaxin-1.

By similarity

GO - Molecular functioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
Q80U23, 1 interactor

Molecular INTeraction database

More...
MINTi
Q80U23

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000028951

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q80U23

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili79 – 161Sequence analysisAdd BLAST83

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi32 – 42Poly-SerAdd BLAST11
Compositional biasi403 – 408Poly-Glu6
Compositional biasi409 – 412Poly-Ala4

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00520000055634

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q80U23

Identification of Orthologs from Complete Genome Data

More...
OMAi
IQTDFAQ

Database of Orthologous Groups

More...
OrthoDBi
391092at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q80U23

TreeFam database of animal gene trees

More...
TreeFami
TF332407

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR026196 Syntaphilin
IPR028197 Syntaphilin/Syntabulin

The PANTHER Classification System

More...
PANTHERi
PTHR16208:SF1 PTHR16208:SF1, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15290 Syntaphilin, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q80U23-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAMSLQGSRR ASAGSRRRTS PPVSVRDAYG TSSLSSSSNS GSCKGSDSSP
60 70 80 90 100
TPRRSMKYTL CSDNHGIKPP TPEQYLTPLQ QKEVCIRHLK ARLKDTQDRL
110 120 130 140 150
QDRDTEIDDL KTQLSRMQED WIEEECHRVE AQLALKEARK EIRQLKQVID
160 170 180 190 200
TVKNNLIDKD KGLQKYFVDI NIQNKKLETL LHSMEVAQNG VAKEEGTGES
210 220 230 240 250
AGGSPARSLT RSSTYTKLSD PAVCGDRQPG DPSNTSAEDG ADSGYVAADD
260 270 280 290 300
TLSRTDALEA SSLLSSGVDC GLEEASLHSS FNLGPRFPAS NTYEKLLCGM
310 320 330 340 350
EAGVQVSCMQ ERAIQTDFVQ YQPDLNTILE KVGQAQVCGS VLKDRHSELD
360 370 380 390 400
PHPSGPRDPD SAVVVTVGDE LEAPEPITCG PATHRPAVNS NPGLPVSVVC
410 420 430 440 450
PVEEEEEEAA AATTTEKEPK SYWSRHYIVD LLAVVVPAVP TVAWLCRSQR
460 470 480 490
RQGQPIYNIS SLLRGCCTVA LHSIRRISCR SLGQPSSSTA GGSQL
Length:495
Mass (Da):53,753
Last modified:June 16, 2009 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD1BA1C0702446C97
GO
Isoform 2 (identifier: Q80U23-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     16-16: R → RSGGTLGRSGLAVFAQCPQVPASQNEQRPLLPAS

Show »
Length:528
Mass (Da):57,073
Checksum:i80BB016EEC7C0CA6
GO
Isoform 3 (identifier: Q80U23-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     17-52: Missing.

Show »
Length:459
Mass (Da):50,168
Checksum:i2B4D4FF0614DF892
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Z4YN82Z4YN82_MOUSE
Syntaphilin
Snph
87Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
S4R180S4R180_MOUSE
Syntaphilin
Snph
60Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A140T8V7A0A140T8V7_MOUSE
Syntaphilin
Snph
10Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH72567 differs from that shown. Reason: Erroneous initiation.Curated
The sequence AAH96541 differs from that shown. Reason: Erroneous initiation.Curated
The sequence AAI39793 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAC33090 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAC65544 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti156L → V in BAC33090 (PubMed:16141072).Curated1
Sequence conflicti165K → M in AAH96541 (PubMed:15489334).Curated1
Sequence conflicti358D → Y in BAC33090 (PubMed:16141072).Curated1
Sequence conflicti456I → V in AAI17897 (PubMed:15489334).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_03743916R → RSGGTLGRSGLAVFAQCPQV PASQNEQRPLLPAS in isoform 2. 3 Publications1
Alternative sequenceiVSP_03744017 – 52Missing in isoform 3. 1 PublicationAdd BLAST36

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK122262 mRNA Translation: BAC65544.1 Different initiation.
AK047568 mRNA Translation: BAC33090.1 Different initiation.
AL928719 Genomic DNA No translation available.
BC072567 mRNA Translation: AAH72567.1 Different initiation.
BC096541 mRNA Translation: AAH96541.1 Different initiation.
BC117896 mRNA Translation: AAI17897.1
BC117897 mRNA Translation: AAI17898.1
BC139792 mRNA Translation: AAI39793.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS16871.1 [Q80U23-2]
CCDS71161.1 [Q80U23-3]
CCDS71162.1 [Q80U23-1]

NCBI Reference Sequences

More...
RefSeqi
NP_001278005.1, NM_001291076.1 [Q80U23-1]
NP_001278006.1, NM_001291077.1 [Q80U23-3]
NP_937857.1, NM_198214.3 [Q80U23-2]
XP_011237840.1, XM_011239538.1 [Q80U23-2]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000028951; ENSMUSP00000028951; ENSMUSG00000027457 [Q80U23-2]
ENSMUST00000094456; ENSMUSP00000092026; ENSMUSG00000027457 [Q80U23-1]
ENSMUST00000109875; ENSMUSP00000105501; ENSMUSG00000027457 [Q80U23-2]
ENSMUST00000109877; ENSMUSP00000105503; ENSMUSG00000027457 [Q80U23-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
241727

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:241727

UCSC genome browser

More...
UCSCi
uc008ned.2 mouse [Q80U23-2]
uc008nee.2 mouse [Q80U23-1]
uc008nef.2 mouse [Q80U23-3]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK122262 mRNA Translation: BAC65544.1 Different initiation.
AK047568 mRNA Translation: BAC33090.1 Different initiation.
AL928719 Genomic DNA No translation available.
BC072567 mRNA Translation: AAH72567.1 Different initiation.
BC096541 mRNA Translation: AAH96541.1 Different initiation.
BC117896 mRNA Translation: AAI17897.1
BC117897 mRNA Translation: AAI17898.1
BC139792 mRNA Translation: AAI39793.1 Different initiation.
CCDSiCCDS16871.1 [Q80U23-2]
CCDS71161.1 [Q80U23-3]
CCDS71162.1 [Q80U23-1]
RefSeqiNP_001278005.1, NM_001291076.1 [Q80U23-1]
NP_001278006.1, NM_001291077.1 [Q80U23-3]
NP_937857.1, NM_198214.3 [Q80U23-2]
XP_011237840.1, XM_011239538.1 [Q80U23-2]

3D structure databases

SMRiQ80U23
ModBaseiSearch...

Protein-protein interaction databases

IntActiQ80U23, 1 interactor
MINTiQ80U23
STRINGi10090.ENSMUSP00000028951

PTM databases

iPTMnetiQ80U23
PhosphoSitePlusiQ80U23
SwissPalmiQ80U23

Proteomic databases

PeptideAtlasiQ80U23
PRIDEiQ80U23

Genome annotation databases

EnsembliENSMUST00000028951; ENSMUSP00000028951; ENSMUSG00000027457 [Q80U23-2]
ENSMUST00000094456; ENSMUSP00000092026; ENSMUSG00000027457 [Q80U23-1]
ENSMUST00000109875; ENSMUSP00000105501; ENSMUSG00000027457 [Q80U23-2]
ENSMUST00000109877; ENSMUSP00000105503; ENSMUSG00000027457 [Q80U23-3]
GeneIDi241727
KEGGimmu:241727
UCSCiuc008ned.2 mouse [Q80U23-2]
uc008nee.2 mouse [Q80U23-1]
uc008nef.2 mouse [Q80U23-3]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
9751
MGIiMGI:2139270 Snph

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

GeneTreeiENSGT00520000055634
InParanoidiQ80U23
OMAiIQTDFAQ
OrthoDBi391092at2759
PhylomeDBiQ80U23
TreeFamiTF332407

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q80U23

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000027457 Expressed in 102 organ(s), highest expression level in visual cortex
ExpressionAtlasiQ80U23 baseline and differential
GenevisibleiQ80U23 MM

Family and domain databases

InterProiView protein in InterPro
IPR026196 Syntaphilin
IPR028197 Syntaphilin/Syntabulin
PANTHERiPTHR16208:SF1 PTHR16208:SF1, 1 hit
PfamiView protein in Pfam
PF15290 Syntaphilin, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSNPH_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q80U23
Secondary accession number(s): A2AT08
, A2AT09, A2AT10, A2AT11, A4FUV3, A4VCI7, Q4VA51, Q6GQX4, Q8C8B8
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: June 16, 2009
Last modified: October 16, 2019
This is version 102 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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