UniProtKB - Q80872 (NS2A_CVHOC)
Protein
Non-structural protein 2a
Gene
2a
Organism
Human coronavirus OC43 (HCoV-OC43)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Non-structural protein 2aShort name: ns2a Alternative name(s): 32 kDa accessory protein 32 kDa non-structural protein ns2 |
Gene namesi | ORF Names:2a |
Organismi | Human coronavirus OC43 (HCoV-OC43) |
Taxonomic identifieri | 31631 [NCBI] |
Taxonomic lineagei | Viruses › Riboviria › Orthornavirae › Pisuviricota › Pisoniviricetes › Nidovirales › Cornidovirineae › Coronaviridae › Orthocoronavirinae › Betacoronavirus › Embecovirus › |
Virus hosti | Homo sapiens (Human) [TaxID: 9606] |
Proteomesi |
|
Subcellular locationi
- Host cytoplasm 1 Publication
GO - Cellular componenti
- host cell cytoplasm Source: UniProtKB-SubCell
Keywords - Cellular componenti
Host cytoplasmPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000106067 | 1 – 278 | Non-structural protein 2aAdd BLAST | 278 |
Family & Domainsi
Sequence similaritiesi
Belongs to the coronaviruses ns2a protein family.Curated
Family and domain databases
InterProi | View protein in InterPro IPR007878, Coronavirus_NS2A IPR039573, NS2A-like |
Pfami | View protein in Pfam PF05213, Corona_NS2A, 1 hit |
PIRSFi | PIRSF003890, LigT_coronavirus, 1 hit |
i Sequence
Sequence statusi: Complete.
Q80872-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAVAYADKPN HFINFPLTHF QGFVLNYKGL QFQILDEGVD CKIQTAPHIS
60 70 80 90 100
LTMLDIQPED YKSVDVAIQE VIDDMHWGDG FQIKFENPHI LGRCIVLDVK
110 120 130 140 150
GVEELHDDLV NYIRDKGCVA DQSRKWIGHC TIAQLTDAAL SIKENVDFIN
160 170 180 190 200
SMQFNYKITI NPSSPARLEI VKLGAEKKDG FYETIVSHWM GIRFEYTSPT
210 220 230 240 250
DKLAMIMGYC CLDVVRKELE EGDLPENDDD AWFKLSYHYE NNSWFFRHVY
260 270
RKSFHFRKAC QNLDCNCLGF YESPVEED
Natural variant
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural varianti | 274 | P → S in strain: Isolate ATCC VR-759, Isolate clinical OC43-Paris, Isolate 19572 Belgium 2004 and Isolate 87309 Belgium 2003. | 1 | |
Natural varianti | 278 | D → Y in strain: Isolate ATCC VR-759, Isolate clinical OC43-Paris, Isolate 19572 Belgium 2004 and Isolate 87309 Belgium 2003. | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L37833 mRNA Translation: AAA74377.1 AY391777 Genomic RNA Translation: AAR01013.1 AY903459 Genomic RNA Translation: AAX85667.1 AY903460 Genomic RNA Translation: AAX85676.1 AY585228 Genomic RNA Translation: AAT84352.1 AY585229 Genomic RNA Translation: AAT84360.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L37833 mRNA Translation: AAA74377.1 AY391777 Genomic RNA Translation: AAR01013.1 AY903459 Genomic RNA Translation: AAX85667.1 AY903460 Genomic RNA Translation: AAX85676.1 AY585228 Genomic RNA Translation: AAT84352.1 AY585229 Genomic RNA Translation: AAT84360.1 |
3D structure databases
SMRi | Q80872 |
ModBasei | Search... |
Family and domain databases
InterProi | View protein in InterPro IPR007878, Coronavirus_NS2A IPR039573, NS2A-like |
Pfami | View protein in Pfam PF05213, Corona_NS2A, 1 hit |
PIRSFi | PIRSF003890, LigT_coronavirus, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | NS2A_CVHOC | |
Accessioni | Q80872Primary (citable) accession number: Q80872 Secondary accession number(s): Q6TNG1 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | April 11, 2003 |
Last sequence update: | November 1, 1996 | |
Last modified: | December 2, 2020 | |
This is version 79 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Viral Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families