Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Troponin C

Gene

GSONMT00056460001

Organism
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Calcium bindingi65 – 76PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi105 – 116PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi141 – 152PROSITE-ProRule annotationAdd BLAST12

GO - Molecular functioni

  • calcium ion binding Source: AgBase

Keywordsi

LigandCalciumPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Troponin CImported
Gene namesi
ORF Names:GSONMT00056460001Imported
OrganismiOncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)Imported
Taxonomic identifieri8022 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeOncorhynchus
Proteomesi
  • UP000193380 Componenti: Unassembled WGS sequence

Subcellular locationi

Structurei

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 51EF-handInterPro annotationAdd BLAST19
Domaini52 – 87EF-handInterPro annotationAdd BLAST36
Domaini92 – 127EF-handInterPro annotationAdd BLAST36
Domaini128 – 161EF-handInterPro annotationAdd BLAST34

Phylogenomic databases

HOVERGENiHBG012180

Family and domain databases

CDDicd00051 EFh, 2 hits
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
PfamiView protein in Pfam
PF13499 EF-hand_7, 1 hit
PF13833 EF-hand_8, 1 hit
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 3 hits
PS50222 EF_HAND_2, 4 hits

Sequencei

Sequence statusi: Complete.

Q7ZZB9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNDIYKAAVE QLTDEQKNEF KAAFDIFIQD AEDGCISTKE LGKVMRMLGQ
60 70 80 90 100
NPTPEELQEM IDEVDEDGSG TVDFDEFLVM MVRCMKDDSK GKTEEELADL
110 120 130 140 150
FCMFDKNADG YIDLQELKVM LEATGEAITE DDIEELMKDG DKNNDGKIDY
160
DEFLEFMKGV E
Length:161
Mass (Da):18,361
Last modified:June 1, 2003 - v1
Checksum:i8776CD70454B8B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY281129 mRNA Translation: AAP33791.1
FR905919 Genomic DNA Translation: CDQ82174.1
RefSeqiNP_001117928.1, NM_001124456.1
UniGeneiOmy.30097

Genome annotation databases

GeneIDi100136178

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY281129 mRNA Translation: AAP33791.1
FR905919 Genomic DNA Translation: CDQ82174.1
RefSeqiNP_001117928.1, NM_001124456.1
UniGeneiOmy.30097

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1R2UNMR-A1-89[»]
1R6PNMR-A1-89[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100136178

Phylogenomic databases

HOVERGENiHBG012180

Family and domain databases

CDDicd00051 EFh, 2 hits
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
PfamiView protein in Pfam
PF13499 EF-hand_7, 1 hit
PF13833 EF-hand_8, 1 hit
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 3 hits
PS50222 EF_HAND_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ7ZZB9_ONCMY
AccessioniPrimary (citable) accession number: Q7ZZB9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: October 10, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again