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Protein
Submitted name:

RAD54-like (S. cerevisiae)

Gene

rad54l

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi670Zinc; via tele nitrogenCombined sources1
Metal bindingi675ZincCombined sources1
Metal bindingi678ZincCombined sources1
Metal bindingi702Zinc; via pros nitrogenCombined sources1

GO - Molecular functioni

  • ATP binding Source: InterPro
  • DNA binding Source: ZFIN
  • DNA-dependent ATPase activity Source: ZFIN
  • metal ion binding Source: UniProtKB-KW

Keywordsi

LigandMetal-bindingCombined sources, ZincCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
RAD54-like (S. cerevisiae)Imported
Gene namesi
Name:rad54lImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-040426-968 rad54l

Structurei

3D structure databases

ProteinModelPortaliQ7ZV09
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7ZV09

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini164 – 339Helicase ATP-bindingInterPro annotationAdd BLAST176
Domaini493 – 647Helicase C-terminalInterPro annotationAdd BLAST155

Phylogenomic databases

eggNOGiKOG0390 Eukaryota
COG0553 LUCA
HOGENOMiHOG000204521
HOVERGENiHBG058654
KOiK10875
PhylomeDBiQ7ZV09

Family and domain databases

CDDicd00079 HELICc, 1 hit
Gene3Di3.40.50.10810, 1 hit
InterProiView protein in InterPro
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF00176 SNF2_N, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Complete.

Q7ZV09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRSLAPSQV AKRKQGPDSD DEEDWEPDME PQSKRDCREK YISPYRKPLT
60 70 80 90 100
PLTNRPVCAD GNEHEAFIRK ILSKPFKIPI PNYTGVLGLR ALGLRRAGVR
110 120 130 140 150
KALHDPFEDG ALVLYEPPAI SAHDLIKADK EKLPVHVVVD PVLSKVLRPH
160 170 180 190 200
QREGVKFLWD CVTGRRIENS YGCIMADEMG LGKTLQCITL IWTLLKQSPD
210 220 230 240 250
CKPEIDKVIV VSPSSLVRNW YNEVGKWLGG RVQPVAIDGG SKDEIDSKLV
260 270 280 290 300
NFISQQGMRI PTPILIISYE TFRLHAEVLH KGKVGLVICD EGHRLKNSDN
310 320 330 340 350
QTYLALNSMN AQRRVLISGT PIQNDLLEYF SLVHFVNSGI LGTAQEFKKR
360 370 380 390 400
FEIPILKGRD ADASDKDRAA GEQKLQELIS IVNRCLIRRT SDILSKYLPV
410 420 430 440 450
KIEQVVCCNL TPLQKELYKL FLKQAKPVES LQTGKISVSS LSSITSLKKL
460 470 480 490 500
CNHPALIYEK CLTGEEGFDG ALDLFPQNYS TKAVEPQLSG KMLVLDYILA
510 520 530 540 550
MTRTTTSDKV VLVSNYTQTL DLFEKLCRNR RYLYVRLDGT MSIKKRAKIV
560 570 580 590 600
ERFNNPSSPE FIFMLSSKAG GCGLNLIGAN RLVMFDPDWN PANDEQAMAR
610 620 630 640 650
VWRDGQKKTC YIYRLLSTGT IEEKILQRQA HKKALSSCVV DEEQDVERHF
660 670 680 690 700
SLGELRELFS LNEKTLSDTH DRFRCRRCVN GRQVRPPPDD SDCTCDLSNW
710 720 730
HHCADKRGLR DPVLQASWDA AVSFVFHQRS HEDQRGVV
Length:738
Mass (Da):83,645
Last modified:June 1, 2003 - v1
Checksum:i73A44EEDA070301E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC046050 mRNA Translation: AAH46050.1
RefSeqiNP_957438.1, NM_201144.1
UniGeneiDr.78565

Genome annotation databases

GeneIDi394119
KEGGidre:394119

Similar proteinsi

Entry informationi

Entry nameiQ7ZV09_DANRE
AccessioniPrimary (citable) accession number: Q7ZV09
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: July 18, 2018
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

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