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UniProtKB - Q7ZUW7 (MDM4_DANRE)
Protein
Protein Mdm4
Gene
mdm4
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain.
By similarityRegions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 305 – 334 | RanBP2-typePROSITE-ProRule annotationAdd BLAST | 30 | |
Zinc fingeri | 443 – 484 | RING-type; degenerateAdd BLAST | 42 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- p53 binding Source: GO_Central
GO - Biological processi
- negative regulation of apoptotic process Source: InterPro
- regulation of cell cycle Source: InterPro
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Enzyme and pathway databases
Reactomei | R-DRE-2559580, Oxidative Stress Induced Senescence R-DRE-2559585, Oncogene Induced Senescence R-DRE-5689880, Ub-specific processing proteases R-DRE-6804756, Regulation of TP53 Activity through Phosphorylation R-DRE-6804757, Regulation of TP53 Degradation R-DRE-69541, Stabilization of p53 |
Names & Taxonomyi
Protein namesi | Recommended name: Protein Mdm4Alternative name(s): Double minute 4 protein Mdm2-like p53-binding protein Protein Mdmx p53-binding protein Mdm4 |
Gene namesi | Name:mdm4 Synonyms:mdmx |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio) |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-030131-6872, mdm4 |
Subcellular locationi
Nucleus
- Nucleus By similarity
Nucleus
- nucleus Source: GO_Central
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000331517 | 1 – 496 | Protein Mdm4Add BLAST | 496 |
Proteomic databases
PaxDbi | Q7ZUW7 |
Interactioni
Subunit structurei
Binds to p73 (By similarity).
Interacts directly with p53.
By similarity1 PublicationGO - Molecular functioni
- p53 binding Source: GO_Central
Protein-protein interaction databases
BioGRIDi | 85461, 1 interactor |
STRINGi | 7955.ENSDARP00000074651 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
AlphaFoldDBi | Q7ZUW7 |
SMRi | Q7ZUW7 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q7ZUW7 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 22 – 105 | SWIB/MDM2PROSITE-ProRule annotationAdd BLAST | 84 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 21 | DisorderedSequence analysisAdd BLAST | 21 | |
Regioni | 115 – 177 | DisorderedSequence analysisAdd BLAST | 63 | |
Regioni | 210 – 229 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 259 – 302 | DisorderedSequence analysisAdd BLAST | 44 | |
Regioni | 350 – 428 | DisorderedSequence analysisAdd BLAST | 79 |
Motif
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Motifi | 448 – 451 | Nuclear localization signalSequence analysis | 4 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 16 | Polar residuesSequence analysisAdd BLAST | 16 | |
Compositional biasi | 115 – 158 | Polar residuesSequence analysisAdd BLAST | 44 | |
Compositional biasi | 159 – 177 | Basic and acidic residuesSequence analysisAdd BLAST | 19 | |
Compositional biasi | 259 – 290 | Basic and acidic residuesSequence analysisAdd BLAST | 32 | |
Compositional biasi | 392 – 410 | Polar residuesSequence analysisAdd BLAST | 19 |
Sequence similaritiesi
Belongs to the MDM2/MDM4 family.Curated
Zinc finger
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 305 – 334 | RanBP2-typePROSITE-ProRule annotationAdd BLAST | 30 | |
Zinc fingeri | 443 – 484 | RING-type; degenerateAdd BLAST | 42 |
Keywords - Domaini
Zinc-fingerPhylogenomic databases
eggNOGi | ENOG502QQNV, Eukaryota |
InParanoidi | Q7ZUW7 |
PhylomeDBi | Q7ZUW7 |
Family and domain databases
Gene3Di | 1.10.245.10, 1 hit 3.30.40.10, 1 hit |
IDEALi | IID50094 |
InterProi | View protein in InterPro IPR015458, MDM4 IPR016495, p53_neg-reg_MDM_2/4 IPR036885, SWIB_MDM2_dom_sf IPR003121, SWIB_MDM2_domain IPR001876, Znf_RanBP2 IPR036443, Znf_RanBP2_sf IPR013083, Znf_RING/FYVE/PHD |
PANTHERi | PTHR13844:SF20, PTHR13844:SF20, 1 hit |
Pfami | View protein in Pfam PF02201, SWIB, 1 hit |
PIRSFi | PIRSF500699, MDM4, 1 hit PIRSF006748, p53_MDM_2/4, 1 hit |
SUPFAMi | SSF47592, SSF47592, 1 hit SSF90209, SSF90209, 1 hit |
PROSITEi | View protein in PROSITE PS51925, SWIB_MDM2, 1 hit PS01358, ZF_RANBP2_1, 1 hit PS50199, ZF_RANBP2_2, 1 hit |
s (2+)i Sequence
Sequence statusi: Complete.
This entry describes 2 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All
Isoform 1 (identifier: Q7ZUW7-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MTSLASSSQL PGSCRTLPGE GTQVHPRAPL LQILKVAGAQ EEVFTLKEVM
60 70 80 90 100
HYLGQYIMMK QLYDKQRQHI VHCHDDPLGE LLEVGSFSVK NPSPVYEMLK
110 120 130 140 150
RNLVILNNSD AAKNLSVGKD SNESPSEDPG QVSSGSINSA QPLIAGSSST
160 170 180 190 200
GTTQSCSQRR PRDPDEDSSD GLPRSACKRP KLDVTLEEWD LSGLPWWFLG
210 220 230 240 250
NLRSNYTRRS NGSTDIHTNQ LSPGQDEDTA IVSDTTDDLW FLNEAESEQV
260 270 280 290 300
SVEIKEAVLE QGSDGESPHE DEDTGKDSKD DGKMQEEQEE DSQCLSDDTD
310 320 330 340 350
TEISTQDAWQ CSECRKFNTP LQRYCMRCWA LRKDWYKDCP RLVHSISVPD
360 370 380 390 400
IPACSSRPER DEDEEEEDDD GIDMPDCLRT VSDPVVLPSH RVSRNIPSSS
410 420 430 440 450
ASSSKGKGPS QIHHHFQETS EGDSQDTLDM ETEYQPEALL EPCKLCRVRP
460 470 480 490
RNGNIIHGRT AHLITCFPCA RKLHKFHAPC PGCGQVIQKV IKTFIA
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketF1QD25 | F1QD25_DANRE | Protein Mdm4 | mdm4 | 496 | Annotation score: | ||
X1WCV6 | X1WCV6_DANRE | Protein Mdm4 | mdm4 | 491 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 254 | I → M in AAH47801 (Ref. 1) Curated | 1 | |
Sequence conflicti | 270 | E → G in AAH47801 (Ref. 1) Curated | 1 | |
Sequence conflicti | 342 | L → P in AAH47801 (Ref. 1) Curated | 1 | |
Sequence conflicti | 416 | F → L in AAH47801 (Ref. 1) Curated | 1 |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_033237 | 220 – 224 | Missing in isoform 2. 1 Publication | 5 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC047801 mRNA Translation: AAH47801.1 BC097069 mRNA Translation: AAH97069.1 |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC047801 mRNA Translation: AAH47801.1 BC097069 mRNA Translation: AAH97069.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
2Z5S | X-ray | 2.30 | M/N/O | 15-140 | [»] | |
2Z5T | X-ray | 2.30 | M/N/O | 15-140 | [»] | |
3DAC | X-ray | 1.80 | A/M | 15-129 | [»] | |
4N5T | X-ray | 1.70 | A | 17-106 | [»] | |
6V4E | X-ray | 1.62 | A/B | 15-106 | [»] | |
6V4F | X-ray | 1.35 | A | 15-106 | [»] | |
6V4G | X-ray | 1.25 | A | 15-106 | [»] | |
6V4H | X-ray | 1.53 | A/C | 15-106 | [»] | |
AlphaFoldDBi | Q7ZUW7 | |||||
SMRi | Q7ZUW7 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 85461, 1 interactor |
STRINGi | 7955.ENSDARP00000074651 |
Proteomic databases
PaxDbi | Q7ZUW7 |
Organism-specific databases
ZFINi | ZDB-GENE-030131-6872, mdm4 |
Phylogenomic databases
eggNOGi | ENOG502QQNV, Eukaryota |
InParanoidi | Q7ZUW7 |
PhylomeDBi | Q7ZUW7 |
Enzyme and pathway databases
Reactomei | R-DRE-2559580, Oxidative Stress Induced Senescence R-DRE-2559585, Oncogene Induced Senescence R-DRE-5689880, Ub-specific processing proteases R-DRE-6804756, Regulation of TP53 Activity through Phosphorylation R-DRE-6804757, Regulation of TP53 Degradation R-DRE-69541, Stabilization of p53 |
Miscellaneous databases
EvolutionaryTracei | Q7ZUW7 |
PROi | PR:Q7ZUW7 |
Family and domain databases
Gene3Di | 1.10.245.10, 1 hit 3.30.40.10, 1 hit |
IDEALi | IID50094 |
InterProi | View protein in InterPro IPR015458, MDM4 IPR016495, p53_neg-reg_MDM_2/4 IPR036885, SWIB_MDM2_dom_sf IPR003121, SWIB_MDM2_domain IPR001876, Znf_RanBP2 IPR036443, Znf_RanBP2_sf IPR013083, Znf_RING/FYVE/PHD |
PANTHERi | PTHR13844:SF20, PTHR13844:SF20, 1 hit |
Pfami | View protein in Pfam PF02201, SWIB, 1 hit |
PIRSFi | PIRSF500699, MDM4, 1 hit PIRSF006748, p53_MDM_2/4, 1 hit |
SUPFAMi | SSF47592, SSF47592, 1 hit SSF90209, SSF90209, 1 hit |
PROSITEi | View protein in PROSITE PS51925, SWIB_MDM2, 1 hit PS01358, ZF_RANBP2_1, 1 hit PS50199, ZF_RANBP2_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | MDM4_DANRE | |
Accessioni | Q7ZUW7Primary (citable) accession number: Q7ZUW7 Secondary accession number(s): Q4V944 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | April 29, 2008 |
Last sequence update: | April 29, 2008 | |
Last modified: | May 25, 2022 | |
This is version 105 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families