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Protein
Submitted name:

Map1lc3b protein

Gene

map1lc3b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Biological processAutophagyUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-DRE-1632852 Macroautophagy
R-DRE-5205685 Pink/Parkin Mediated Mitophagy
R-DRE-8854214 TBC/RABGAPs
R-DRE-8934903 Receptor Mediated Mitophagy

Names & Taxonomyi

Protein namesi
Submitted name:
Map1lc3b proteinImported
Submitted name:
Microtubule-associated protein 1 light chain 3 betaImported
Submitted name:
Microtubule-associated protein 1-light chain 3BImported
Gene namesi
Name:map1lc3bImported
Synonyms:MAP1-LC3BImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 25

Organism-specific databases

ZFINiZDB-GENE-030131-1145 map1lc3b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi120Phosphatidylethanolamine amidated glycineUniRule annotation1

Keywords - PTMi

LipoproteinUniRule annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000101127

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000003432

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOGENOMiHOG000232034
HOVERGENiHBG051706
KOiK10435
OMAiIRDQHPT
OrthoDBiEOG091G18ST
TreeFamiTF312964

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit

Sequencei

Sequence statusi: Complete.

Q7ZUD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSEKTFKQR RTFEQRVEDV RLIREQHPNK IPVIIERYKG EKQLPILDKT
60 70 80 90 100
KFLVPDHVNM SELIKIIRRR LQLNSNQAFF LLVNGHSMVS VSTAISEVYE
110 120
RERDEDGFLY MVYASQETFG FQ
Length:122
Mass (Da):14,519
Last modified:June 1, 2003 - v1
Checksum:i8C6E38B160DDE6E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU571064 Genomic DNA No translation available.
BC049313 mRNA Translation: AAH49313.1
BC155206 mRNA Translation: AAI55207.1
AB264294 mRNA Translation: BAF43579.1
RefSeqiNP_955898.1, NM_199604.1
UniGeneiDr.120733

Genome annotation databases

EnsembliENSDART00000163508; ENSDARP00000130443; ENSDARG00000101127
GeneIDi322425
KEGGidre:322425

Similar proteinsi

Entry informationi

Entry nameiQ7ZUD8_DANRE
AccessioniPrimary (citable) accession number: Q7ZUD8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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