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Protein

Chitinase 5

Gene

Cht5

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May function in reproductive organs during embryogenesis and seed maturation.

Catalytic activityi

Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Chitin degradation, Plant defense, Polysaccharide degradation
LigandChitin-binding

Protein family/group databases

CAZyiCBM18 Carbohydrate-Binding Module Family 18
GH19 Glycoside Hydrolase Family 19

Names & Taxonomyi

Protein namesi
Recommended name:
Chitinase 5 (EC:3.2.1.14)
Alternative name(s):
Class IV chitinase a
Short name:
OsChia4a
Pathogenesis related (PR)-3 chitinase 5
Gene namesi
Name:Cht5
Ordered Locus Names:Os04g0494100, LOC_Os04g41680
ORF Names:OsJ_15308, OSJNBb0091E11.12
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 4

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_000038346430 – 288Chitinase 5Add BLAST259

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi32 ↔ 40PROSITE-ProRule annotation
Disulfide bondi34 ↔ 46PROSITE-ProRule annotation
Disulfide bondi39 ↔ 53PROSITE-ProRule annotation
Disulfide bondi57 ↔ 62PROSITE-ProRule annotation
Disulfide bondi107 ↔ 156PROSITE-ProRule annotation
Disulfide bondi169 ↔ 178PROSITE-ProRule annotation
Disulfide bondi256 ↔ 288PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiQ7Y1Z0

Expressioni

Tissue specificityi

Expressed in sheaths and meristems and at lower levels in roots and leaves.1 Publication

Gene expression databases

ExpressionAtlasiQ7Y1Z0 differential
GenevisibleiQ7Y1Z0 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os04g41680.1

Structurei

3D structure databases

ProteinModelPortaliQ7Y1Z0
SMRiQ7Y1Z0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 64Chitin-binding type-1PROSITE-ProRule annotationAdd BLAST35

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi64 – 84Poly-GlyAdd BLAST21

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG4742 Eukaryota
COG3979 LUCA
InParanoidiQ7Y1Z0
KOiK01183
OMAiAPNSCAG
OrthoDBiEOG09360MAQ

Family and domain databases

CDDicd00325 chitinase_glyco_hydro_19, 1 hit
Gene3Di3.30.60.10, 1 hit
InterProiView protein in InterPro
IPR001002 Chitin-bd_1
IPR018371 Chitin-binding_1_CS
IPR036861 Endochitinase-like_sf
IPR016283 Glyco_hydro_19
IPR000726 Glyco_hydro_19_cat
IPR023346 Lysozyme-like_dom_sf
PfamiView protein in Pfam
PF00187 Chitin_bind_1, 1 hit
PF00182 Glyco_hydro_19, 2 hits
PIRSFiPIRSF001060 Endochitinase, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609 Chitin_bd_1, 1 hit
SMARTiView protein in SMART
SM00270 ChtBD1, 1 hit
SUPFAMiSSF53955 SSF53955, 1 hit
SSF57016 SSF57016, 1 hit
PROSITEiView protein in PROSITE
PS00026 CHIT_BIND_I_1, 1 hit
PS50941 CHIT_BIND_I_2, 1 hit
PS00773 CHITINASE_19_1, 1 hit
PS00774 CHITINASE_19_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7Y1Z0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANSPTPTML AFLALGLALL LSATGQASAQ NCGCQSNMCC SKWGYCGTGK
60 70 80 90 100
DYCGDGCRSG PCYGGGGGGG GGGGGGGGGG GGSGVSVESV VTEAFFNGIK
110 120 130 140 150
NQAPNGCAGK NFYTRQSFLN AAHSYSGFAR DRTNDDSKRE IAAFFAHVTH
160 170 180 190 200
ETGHMCYINE INGASMDYCD KNNKQWPCQP GKKYYGRGPL QISWNYNYGP
210 220 230 240 250
AGQNIGFDGL RDPDRVAQDP TISFKTALWF WMNNVHQVML QGFGATIRAI
260 270 280
NGALECNGKN PGAVNARVNY YKDYCRQFGV DPGGNLYC
Length:288
Mass (Da):30,487
Last modified:October 1, 2003 - v1
Checksum:iE988A12134910C52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB096140 mRNA Translation: BAC76691.1
AL606629 Genomic DNA Translation: CAE01675.2
AP008210 Genomic DNA Translation: BAF15100.1
AP014960 Genomic DNA Translation: BAS89869.1
CM000141 Genomic DNA Translation: EEE61251.1
AK071013 mRNA Translation: BAG92259.1
AK104242 mRNA Translation: BAG96537.1
AK104426 mRNA Translation: BAG96672.1
RefSeqiXP_015636326.1, XM_015780840.1
UniGeneiOs.10166

Genome annotation databases

EnsemblPlantsiOs04t0494100-02; Os04t0494100-02; Os04g0494100
GeneIDi4336265
GrameneiOs04t0494100-02; Os04t0494100-02; Os04g0494100
KEGGiosa:4336265

Similar proteinsi

Entry informationi

Entry nameiCHI5_ORYSJ
AccessioniPrimary (citable) accession number: Q7Y1Z0
Secondary accession number(s): A0A0P0WC98, Q7XT47
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: October 1, 2003
Last modified: May 23, 2018
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

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