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Entry version 91 (11 Dec 2019)
Sequence version 1 (01 Oct 2003)
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Protein

DNA (cytosine-5)-methyltransferase 1A

Gene

MET1A

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probably methylates CpG residues and maintains DNA methylation (PubMed:14513380, PubMed:24535433). May be involved in methylation-dependent gene silencing (PubMed:14513380). May play a minor role in the maintenance of DNA methylation (PubMed:24535433).2 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei1197PROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding, Methyltransferase, Transferase
LigandS-adenosyl-L-methionine

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
2.1.1.37 4460

Protein family/group databases

Restriction enzymes and methylases database

More...
REBASEi
7658 M.OsaDnmt1A

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
DNA (cytosine-5)-methyltransferase 1A1 Publication (EC:2.1.1.37PROSITE-ProRule annotation)
Short name:
OsMET1a1 Publication
Alternative name(s):
DNA methyltransferase 1-11 Publication
Short name:
OsMET1-11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:MET1A1 Publication
Synonyms:MET1-11 Publication
Ordered Locus Names:Os03g0798300Imported, LOC_Os03g58400Imported
ORF Names:OsJ_12965Imported, OSJNBa0094F01.4Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

No visible phenotype under normal growth conditions.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003819391 – 1527DNA (cytosine-5)-methyltransferase 1AAdd BLAST1527

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q7Y1I7

PRoteomics IDEntifications database

More...
PRIDEi
Q7Y1I7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in roots and inflorescences (PubMed:14513380). Expressed in roots, panicles, anthers, pistils, endosperm and imbibed embryos (PubMed:18281124). Expressed in tissues containing actively replicating and dividing cells, such as shoot and root meristems (PubMed:24535433).3 Publications

Gene expression databases

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q7Y1I7 OS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4530.OS03T0798300-01

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini742 – 874BAH 1PROSITE-ProRule annotationAdd BLAST133
Domaini910 – 1049BAH 2PROSITE-ProRule annotationAdd BLAST140
Domaini1092 – 1526SAM-dependent MTase C5-typePROSITE-ProRule annotationAdd BLAST435

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IF68 Eukaryota
COG0270 LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q7Y1I7

KEGG Orthology (KO)

More...
KOi
K00558

Database of Orthologous Groups

More...
OrthoDBi
898916at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001025 BAH_dom
IPR018117 C5_DNA_meth_AS
IPR001525 C5_MeTfrase
IPR031303 C5_meth_CS
IPR022702 Cytosine_MeTrfase1_RFD
IPR017198 DNMT1-like
IPR029063 SAM-dependent_MTases

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01426 BAH, 2 hits
PF00145 DNA_methylase, 1 hit
PF12047 DNMT1-RFD, 2 hits

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF037404 DNMT1, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00105 C5METTRFRASE

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00439 BAH, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53335 SSF53335, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00675 dcm, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51038 BAH, 2 hits
PS00094 C5_MTASE_1, 1 hit
PS00095 C5_MTASE_2, 1 hit
PS51679 SAM_MT_C5, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q7Y1I7-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAKSPRSVVT TGTKRRRAKV HKEDEPVENE NLESEFDVSK KESNGATEPG
60 70 80 90 100
NEPVASKRPK RAAACSNFKE KSLDLSEKDS IITIKESRVE EKEIEAVNLT
110 120 130 140 150
RTGPEDGQPC RKIIDFILHD GDGNLQPFEM SEVDDIFITA LIMPLDDDLE
160 170 180 190 200
KDRGKGICCS GFGRIENWAI SGYDEGAAVI WVSTETSDYK CVKPASSYRS
210 220 230 240 250
YFEHFSEKAR VCVEVYKKLA RSVGGNPQVD LEELIAGVVR SINSNRSFNG
260 270 280 290 300
TVTKDFVISS GEFIYKQLIG LDHTAGNDDE MLATLPVLVA LKDECKSRAG
310 320 330 340 350
FTHLPAMPSN GTLRIKDGQD KGLTEDEDAK LARLLQEEEE WKMMKQRGKR
360 370 380 390 400
GTSQKNIYIK ICETEIANDY PLPAYYKPYN QEMDEYIFDS DIGMYSDDVP
410 420 430 440 450
VRILDNWALY NSDSRLISLE LIPMKAGAEN DIVVFGSGFM REDDGSCCST
460 470 480 490 500
AELAQLHSSS SKSGREDPGV PIYLSPIKEW VVEFGGSMIC ITIRTDVAWY
510 520 530 540 550
KLRQPTKQYA PWCEPVLKTA RLAVSIITLL KEQSRASKLS FAEVIKKVAE
560 570 580 590 600
FDSRHPAFIS SKAPTVERYV VVHGQIILQQ FADFPDESVK RCAFITGLLA
610 620 630 640 650
KMEESRHTKL AIKKKSQQMR GENLNPSAKM GPILRKKLMR ATTTMLISKI
660 670 680 690 700
WGEYYATYFP GDTKEEDQNE PKEIDDDQEE NEDNDAEEEV NVQDEKATRT
710 720 730 740 750
PPSTRSRKSS ADTRKEIKWE GQTAGKTVSG EVLYKCVIVQ DLSISVGATV
760 770 780 790 800
TTEDDSGETI MCFVEYMYEK LDGKNMIHGI ILQEGSQTVL GNAANDREVF
810 820 830 840 850
LTNDCLEFEA SDIKELVTVN IQSLPWGHKY RKENSEAKRI EKAKAEERKR
860 870 880 890 900
KGLPVEYICK SLYWPEKGGF FSLPYDKIGN GTGICSSCER KPVGNEFKLL
910 920 930 940 950
SESSFVFENI TYNIHDFLYI RPEFFSQGEG HETYKAGRNV GLKPYAVCHL
960 970 980 990 1000
LSVHGPAGSR KANPESTKVK VRRFYRPDDI SSTKAYSSDI REVYYSEDII
1010 1020 1030 1040 1050
SVPVVMIEGK CEVRLKDDLP NSDLPAVVEH VFCCEYLYDP ANGALKQLPP
1060 1070 1080 1090 1100
NVRLVTLTRK VPASKKNKGK QICDIELGGS DKPKDGQSEN CLATLDIFAG
1110 1120 1130 1140 1150
CGGLSEGLQR SGLSLTKWAI EYEEPAGDAF GENHPEAAVF VENCNVILKA
1160 1170 1180 1190 1200
IMDKCGDSDD CISTSEAAER AAKLSEDKIK NLPVPGEVEF INGGPPCQGF
1210 1220 1230 1240 1250
SGMNRFNQSP WSKVQCEMIL AFLSFAEYFR PRFFLLENVR NFVSFNKGQT
1260 1270 1280 1290 1300
FRLTLASLLE MGYQVRFGIL EAGAYGVAQS RKRAFIWAAA PGETLPEWPE
1310 1320 1330 1340 1350
PMHVFASPEL KITLPDGKFY AAVKSTAAGA PFRSITVRDT IGDLPAVENG
1360 1370 1380 1390 1400
AGKPTIQYGS GPVSWFQKKI RSDMASLNDH ISKEMNELNL IRCKHIPKRP
1410 1420 1430 1440 1450
GCDWHDLPDE KVKLSTGQMV DLIPWCLPNT AKRHNQWKGL YGRLDWEGNF
1460 1470 1480 1490 1500
PTSVTDPQPM GKVGMCFHPE QDRIITVREC ARSQGFPDSY RFAGNIQNKH
1510 1520
RQIGNAVPPP LAYALGRKLK QAIDAKR
Length:1,527
Mass (Da):170,856
Last modified:October 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i75159928CDDCF098
GO
Isoform 2 (identifier: Q7Y1I7-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-5: Missing.
     6-11: RSVVTT → MDTCLY

Show »
Length:1,522
Mass (Da):170,424
Checksum:iECDF2FCDAC99BA5D
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence ABF99362 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAF13483 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAG98259 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0378491 – 5Missing in isoform 2. Curated5
Alternative sequenceiVSP_0378506 – 11RSVVTT → MDTCLY in isoform 2. Curated6

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF462029 Genomic DNA Translation: AAL77415.1
AB362510 Genomic DNA Translation: BAG15928.1
AC093713 Genomic DNA Translation: AAP44671.1
DP000009 Genomic DNA Translation: ABF99362.1 Sequence problems.
AP008209 Genomic DNA Translation: BAF13483.1 Sequence problems.
AP014959 Genomic DNA Translation: BAS86863.1
AP014959 Genomic DNA Translation: BAS86864.1
CM000140 Genomic DNA Translation: EEE60102.1
AK108034 mRNA Translation: BAG98259.1 Different initiation.

NCBI Reference Sequences

More...
RefSeqi
XP_015628331.1, XM_015772845.1
XP_015628332.1, XM_015772846.1 [Q7Y1I7-1]
XP_015628333.1, XM_015772847.1 [Q7Y1I7-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
Os03t0798300-01; Os03t0798300-01; Os03g0798300 [Q7Y1I7-2]
Os03t0798300-02; Os03t0798300-02; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-03; Os03t0798300-03; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-04; Os03t0798300-04; Os03g0798300 [Q7Y1I7-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
4334435

Gramene; a comparative resource for plants

More...
Gramenei
Os03t0798300-01; Os03t0798300-01; Os03g0798300 [Q7Y1I7-2]
Os03t0798300-02; Os03t0798300-02; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-03; Os03t0798300-03; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-04; Os03t0798300-04; Os03g0798300 [Q7Y1I7-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
osa:4334435

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF462029 Genomic DNA Translation: AAL77415.1
AB362510 Genomic DNA Translation: BAG15928.1
AC093713 Genomic DNA Translation: AAP44671.1
DP000009 Genomic DNA Translation: ABF99362.1 Sequence problems.
AP008209 Genomic DNA Translation: BAF13483.1 Sequence problems.
AP014959 Genomic DNA Translation: BAS86863.1
AP014959 Genomic DNA Translation: BAS86864.1
CM000140 Genomic DNA Translation: EEE60102.1
AK108034 mRNA Translation: BAG98259.1 Different initiation.
RefSeqiXP_015628331.1, XM_015772845.1
XP_015628332.1, XM_015772846.1 [Q7Y1I7-1]
XP_015628333.1, XM_015772847.1 [Q7Y1I7-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi4530.OS03T0798300-01

Protein family/group databases

REBASEi7658 M.OsaDnmt1A

Proteomic databases

PaxDbiQ7Y1I7
PRIDEiQ7Y1I7

Genome annotation databases

EnsemblPlantsiOs03t0798300-01; Os03t0798300-01; Os03g0798300 [Q7Y1I7-2]
Os03t0798300-02; Os03t0798300-02; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-03; Os03t0798300-03; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-04; Os03t0798300-04; Os03g0798300 [Q7Y1I7-1]
GeneIDi4334435
GrameneiOs03t0798300-01; Os03t0798300-01; Os03g0798300 [Q7Y1I7-2]
Os03t0798300-02; Os03t0798300-02; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-03; Os03t0798300-03; Os03g0798300 [Q7Y1I7-1]
Os03t0798300-04; Os03t0798300-04; Os03g0798300 [Q7Y1I7-1]
KEGGiosa:4334435

Phylogenomic databases

eggNOGiENOG410IF68 Eukaryota
COG0270 LUCA
InParanoidiQ7Y1I7
KOiK00558
OrthoDBi898916at2759

Enzyme and pathway databases

BRENDAi2.1.1.37 4460

Gene expression databases

GenevisibleiQ7Y1I7 OS

Family and domain databases

InterProiView protein in InterPro
IPR001025 BAH_dom
IPR018117 C5_DNA_meth_AS
IPR001525 C5_MeTfrase
IPR031303 C5_meth_CS
IPR022702 Cytosine_MeTrfase1_RFD
IPR017198 DNMT1-like
IPR029063 SAM-dependent_MTases
PfamiView protein in Pfam
PF01426 BAH, 2 hits
PF00145 DNA_methylase, 1 hit
PF12047 DNMT1-RFD, 2 hits
PIRSFiPIRSF037404 DNMT1, 1 hit
PRINTSiPR00105 C5METTRFRASE
SMARTiView protein in SMART
SM00439 BAH, 2 hits
SUPFAMiSSF53335 SSF53335, 1 hit
TIGRFAMsiTIGR00675 dcm, 1 hit
PROSITEiView protein in PROSITE
PS51038 BAH, 2 hits
PS00094 C5_MTASE_1, 1 hit
PS00095 C5_MTASE_2, 1 hit
PS51679 SAM_MT_C5, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiDNM1A_ORYSJ
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q7Y1I7
Secondary accession number(s): A0A0P0W479
, Q0DMQ5, Q10C15, Q8S4C3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 1, 2009
Last sequence update: October 1, 2003
Last modified: December 11, 2019
This is version 91 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
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