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Protein

Putative lipoxygenase 5

Gene

Os04g0447100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity).By similarity

Catalytic activityi

Linoleate + O2 = (9Z,11E,13S)-13-hydroperoxyoctadeca-9,11-dienoate.
Alpha-linolenate + O2 = (9Z,11E,13S,15Z)-13-hydroperoxyoctadeca-9,11,15-trienoate.

Cofactori

Fe cationPROSITE-ProRule annotationNote: Binds 1 Fe cation per subunit. Iron is tightly bound.PROSITE-ProRule annotation

Pathwayi: oxylipin biosynthesis

This protein is involved in the pathway oxylipin biosynthesis, which is part of Lipid metabolism.PROSITE-ProRule annotation
View all proteins of this organism that are known to be involved in the pathway oxylipin biosynthesis and in Lipid metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi559Iron; catalyticPROSITE-ProRule annotation1
Metal bindingi564Iron; catalyticPROSITE-ProRule annotation1
Metal bindingi751Iron; catalyticPROSITE-ProRule annotation1
Metal bindingi755Iron; catalyticPROSITE-ProRule annotation1
Metal bindingi899Iron; via carboxylate; catalyticPROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDioxygenase, Oxidoreductase
Biological processFatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesis
LigandIron, Metal-binding

Enzyme and pathway databases

ReactomeiR-OSA-2142691 Synthesis of Leukotrienes (LT) and Eoxins (EX)
R-OSA-2142696 Synthesis of Hepoxilins (HX) and Trioxilins (TrX)
R-OSA-2142700 Synthesis of Lipoxins (LX)
R-OSA-2142712 Synthesis of 12-eicosatetraenoic acid derivatives
R-OSA-2142770 Synthesis of 15-eicosatetraenoic acid derivatives
R-OSA-6798695 Neutrophil degranulation
R-OSA-9018676 Biosynthesis of D-series resolvins
R-OSA-9018677 Biosynthesis of DHA-derived SPMs
R-OSA-9018681 Biosynthesis of protectins
R-OSA-9018682 Biosynthesis of maresins
R-OSA-9018896 Biosynthesis of E-series 18(S)-resolvins
R-OSA-9020265 Biosynthesis of aspirin-triggered D-series resolvins
R-OSA-9023661 Biosynthesis of E-series 18(R)-resolvins
R-OSA-9025106 Biosynthesis of DPAn-6 SPMs
R-OSA-9026286 Biosynthesis of DPAn-3-derived protectins and resolvins
R-OSA-9026290 Biosynthesis of DPAn-3-derived maresins
R-OSA-9026403 Biosynthesis of DPAn-3-derived 13-series resolvins
R-OSA-9027604 Biosynthesis of electrophilic Omega-3 PUFA oxo-derivatives
UniPathwayiUPA00382

Names & Taxonomyi

Protein namesi
Recommended name:
Putative lipoxygenase 5 (EC:1.13.11.12)
Gene namesi
Ordered Locus Names:Os04g0447100, LOC_Os04g37430
ORF Names:OSJNBa0064H22.1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 4

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002207111 – 899Putative lipoxygenase 5Add BLAST899

Proteomic databases

PaxDbiQ7XV13

Expressioni

Gene expression databases

ExpressionAtlasiQ7XV13 differential
GenevisibleiQ7XV13 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os04g37430.1

Structurei

3D structure databases

ProteinModelPortaliQ7XV13
SMRiQ7XV13
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini68 – 204PLATPROSITE-ProRule annotationAdd BLAST137
Domaini207 – 899LipoxygenasePROSITE-ProRule annotationAdd BLAST693

Sequence similaritiesi

Belongs to the lipoxygenase family.Curated

Phylogenomic databases

InParanoidiQ7XV13
OrthoDBiEOG0936038B

Family and domain databases

Gene3Di4.10.372.10, 1 hit
InterProiView protein in InterPro
IPR000907 LipOase
IPR013819 LipOase_C
IPR036226 LipOase_C_sf
IPR020834 LipOase_CS
IPR020833 LipOase_Fe_BS
IPR001246 LipOase_plant
IPR027433 Lipoxygenase_dom_3
IPR001024 PLAT/LH2_dom
IPR036392 PLAT/LH2_dom_sf
PANTHERiPTHR11771 PTHR11771, 1 hit
PfamiView protein in Pfam
PF00305 Lipoxygenase, 1 hit
PF01477 PLAT, 1 hit
PRINTSiPR00087 LIPOXYGENASE
PR00468 PLTLPOXGNASE
SMARTiView protein in SMART
SM00308 LH2, 1 hit
SUPFAMiSSF48484 SSF48484, 1 hit
SSF49723 SSF49723, 1 hit
PROSITEiView protein in PROSITE
PS00711 LIPOXYGENASE_1, 1 hit
PS00081 LIPOXYGENASE_2, 1 hit
PS51393 LIPOXYGENASE_3, 1 hit
PS50095 PLAT, 1 hit

Sequencei

Sequence statusi: Complete.

Q7XV13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGGAGMCFA SMEAAGSRGM GKGASRRRTA RSTAPVGALV ERVVVAPAPV
60 70 80 90 100
EQQRGAGRPE AHPQSVAARA VVTVRRRRKE DAKDRFAEQL DALADRVGRS
110 120 130 140 150
VLLELVSTET DPRKGTPKKS KPSALVGWFD KKDVKAERVV YTAEFAVDAG
160 170 180 190 200
FGEPGAVTVL NRHQREFYIE SIVVEGFPTG PAHFTCNSWV QPTRVSRDRR
210 220 230 240 250
VFFSNRPYLP SETPPGLREL RLRELADLRG DGTGERRITD RVYDYDVYND
260 270 280 290 300
LGNPDKGVAS ARPVLGGEQM PYPRRMRTGR PSTATDASAE SRVEYPEPIY
310 320 330 340 350
VSRDEEFEEG KNEMLSEGAI KALLHNFMPL LVSSVSPDIR DFAGFHDVDN
360 370 380 390 400
LFKEGLRLKQ ALHDQLFQKI PFVRKIQENS EGLLRYDTPD IIKKDKFAWL
410 420 430 440 450
RDDEFARQAL AGINPVNIER LQAFPPVSKL DPAVYGPPES AITEEHIIGH
460 470 480 490 500
LDGMSVQEAV EGSRLYMLDY HDIFLPFLDR INAQDGRKAY GTRAVFFLTA
510 520 530 540 550
AGTLKPIAIE LCLPPMTDGC KRAKRVFTPP ADATSNWLWQ LAKAHVCSND
560 570 580 590 600
AGVHQLINHW LRTHACMEPF IIAAHRQMSA MHPIFKLLKP HMRYTLKINA
610 620 630 640 650
LARQILINGD GVIESGFTPG NVCMEMSAFA YRELWRLDQE GLPADLIRRG
660 670 680 690 700
MAVEDPSQPH GLRLLIEDYP YAADGLLLWS AISRWCEAYV AAYYPSDEAV
710 720 730 740 750
QADYELQSWY AEAVQSGHAD KRGAPWWPRL STPGDLASLL TTLVWLCSAQ
760 770 780 790 800
HAALNFGQYP LGGYIPNRPP LMRRLVPAEG DPEYAHLVAD PHRFFLSALP
810 820 830 840 850
SLTQTTTFMT VIDTLSTHSA DEEYLGERPD EAWTADPAAL AAAREFAADV
860 870 880 890
RRAEEEIERR NADPSRRNRC GAGVLPYELM APSSGPGITC RGVPNSVTI
Length:899
Mass (Da):100,082
Last modified:March 1, 2004 - v2
Checksum:i02FDC5545BBAE928
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606448 Genomic DNA Translation: CAD40882.2
AP014960 Genomic DNA No translation available.

Genome annotation databases

EnsemblPlantsiOs04t0447100-01; Os04t0447100-01; Os04g0447100
GrameneiOs04t0447100-01; Os04t0447100-01; Os04g0447100

Similar proteinsi

Entry informationi

Entry nameiLOX5_ORYSJ
AccessioniPrimary (citable) accession number: Q7XV13
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: March 1, 2004
Last modified: May 23, 2018
This is version 85 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

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