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UniProtKB - Q7XUF3 (Q7XUF3_ORYSJ)
Protein
Submitted name:
Os04g0488100 protein
Gene
Os04g0488100
Organism
Oryza sativa subsp. japonica (Rice)
Status
Functioni
GO - Molecular functioni
- chromatin binding Source: GO_Central
GO - Biological processi
- mitotic sister chromatid cohesion Source: GO_Central
- replication-born double-strand break repair via sister chromatid exchange Source: GO_Central
- synaptonemal complex assembly Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: Os04g0488100 proteinImportedSubmitted name: Rad21-2 proteinImportedSubmitted name: cDNA clone:J033043K15, full insert sequenceImported |
Gene namesi | Ordered Locus Names:Os04g0488100Imported ORF Names:OSNPB_040488100Imported |
Organismi | Oryza sativa subsp. japonica (Rice)Imported |
Taxonomic identifieri | 39947 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa |
Proteomesi |
|
Subcellular locationi
Nucleus
- Nucleus ARBA annotation
Nucleus
- nuclear meiotic cohesin complex Source: GO_Central
- nuclear mitotic cohesin complex Source: GO_Central
- synaptonemal complex Source: GO_Central
Keywords - Cellular componenti
NucleusARBA annotationStructurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 86 | Rad21_Rec8_NInterPro annotationAdd BLAST | 86 | |
Domaini | 690 – 739 | Rad21_Rec8InterPro annotationAdd BLAST | 50 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 289 – 320 | DisorderedSequence analysisAdd BLAST | 32 | |
Regioni | 341 – 375 | DisorderedSequence analysisAdd BLAST | 35 | |
Regioni | 388 – 407 | DisorderedSequence analysisAdd BLAST | 20 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 617 – 637 | Sequence analysisAdd BLAST | 21 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 290 – 310 | Basic and acidic residuesSequence analysisAdd BLAST | 21 | |
Compositional biasi | 341 – 366 | Polar residuesSequence analysisAdd BLAST | 26 |
Sequence similaritiesi
Belongs to the rad21 family.ARBA annotation
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG1213, Eukaryota |
HOGENOMi | CLU_021822_0_0_1 |
OMAi | MTCSYAD |
OrthoDBi | 171779at2759 |
Family and domain databases
Gene3Di | 1.10.10.580, 1 hit |
InterProi | View protein in InterPro IPR039781, Rad21/Rec8-like IPR006909, Rad21/Rec8_C_eu IPR006910, Rad21_Rec8_N IPR023093, ScpA-like_C IPR036390, WH_DNA-bd_sf |
PANTHERi | PTHR12585, PTHR12585, 1 hit |
Pfami | View protein in Pfam PF04824, Rad21_Rec8, 1 hit PF04825, Rad21_Rec8_N, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
i Sequence
Sequence statusi: Complete.
Q7XUF3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSCSKVLLSK KGVLGTVWVA AVSGVAALSR DQVVRTNVVA CVDKILPDDN
60 70 80 90 100
DKTTYRVLGL LLLGIVRIYS KKVEYLCHEC NELLGSYGSA HCNELSIPTG
110 120 130 140 150
GATNRVSKQA KKPVRARRLV VRQEGAYKVK IPMQAVRTTR AETRATSQIT
160 170 180 190 200
EVRDTHATPD LPTFTIPKRF ELDSFDLGIP EDRDDDDVDH HQLPHQGTML
210 220 230 240 250
EDENHHTSCL FESYKMMTCS YADLDSACIM PVRVTIPTEM MSVISEVNSL
260 270 280 290 300
LCLSSIGGEP ENHNAESACF TPVKDILPPE MVDMMAEVND PSDKSTRGKK
310 320 330 340 350
PQRELNRDEN GNSACHIPLS GSKEVQIPEN IVENVTFPSR DANCPTIEES
360 370 380 390 400
ENGSLHGTNT NPSCDGFEEP GSLEQPTLRC KTKLINELSP STPEPMTEGG
410 420 430 440 450
TGLPCSPKFM VTTPAKKEKH RVTRKRRRGL YNKDYIPTDR GDKRKVRRRG
460 470 480 490 500
TWVLYDENIV LPNETLRNTI EDASDLVQQR RKAPHTCLYT WKEGKIRSLP
510 520 530 540 550
VTFMDPLILY PTSVYVRHTI TADTPENSCR ESVKSRRRLS LELSESNNIC
560 570 580 590 600
DDAKNVEGES IPDEPRKRKL DELTDSVQAT VGCYTESAQY HNDEDYRFND
610 620 630 640 650
DTVKEKDFSI GGHESHSTEL QERLNALKSK NPQLDEALDA DIDSMEEDTH
660 670 680 690 700
MDEQHARDEG LLRSTRTRTV ARYFHQLLVD QKCQQRNNSV CLGQALEGTK
710 720 730 740
RKTSARFFYE TLILKSGSLI EVNQEQTYGD IIVSATPRLE AALRSSEKQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY371047 mRNA Translation: AAQ75093.2 AK073406 mRNA Translation: BAG93441.1 AP014960 Genomic DNA Translation: BAS89814.1 |
RefSeqi | XP_015635719.1, XM_015780233.1 |
Genome annotation databases
EnsemblPlantsi | Os04t0488100-01; Os04t0488100-01; Os04g0488100 |
GeneIDi | 4336225 |
Gramenei | Os04t0488100-01; Os04t0488100-01; Os04g0488100 |
KEGGi | osa:4336225 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY371047 mRNA Translation: AAQ75093.2 AK073406 mRNA Translation: BAG93441.1 AP014960 Genomic DNA Translation: BAS89814.1 |
RefSeqi | XP_015635719.1, XM_015780233.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 39947.Q7XUF3 |
Genome annotation databases
EnsemblPlantsi | Os04t0488100-01; Os04t0488100-01; Os04g0488100 |
GeneIDi | 4336225 |
Gramenei | Os04t0488100-01; Os04t0488100-01; Os04g0488100 |
KEGGi | osa:4336225 |
Phylogenomic databases
eggNOGi | KOG1213, Eukaryota |
HOGENOMi | CLU_021822_0_0_1 |
OMAi | MTCSYAD |
OrthoDBi | 171779at2759 |
Family and domain databases
Gene3Di | 1.10.10.580, 1 hit |
InterProi | View protein in InterPro IPR039781, Rad21/Rec8-like IPR006909, Rad21/Rec8_C_eu IPR006910, Rad21_Rec8_N IPR023093, ScpA-like_C IPR036390, WH_DNA-bd_sf |
PANTHERi | PTHR12585, PTHR12585, 1 hit |
Pfami | View protein in Pfam PF04824, Rad21_Rec8, 1 hit PF04825, Rad21_Rec8_N, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | Q7XUF3_ORYSJ | |
Accessioni | Q7XUF3Primary (citable) accession number: Q7XUF3 Secondary accession number(s): Q6UFU9 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 1, 2003 |
Last sequence update: | March 1, 2004 | |
Last modified: | January 19, 2022 | |
This is version 128 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |