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UniProtKB - Q7XRV2 (YSL6_ORYSJ)
Protein
Probable metal-nicotianamine transporter YSL6
Gene
YSL6
Organism
Oryza sativa subsp. japonica (Rice)
Status
Functioni
May be involved in the transport of nicotianamine-chelated metals.
By similarityGO - Molecular functioni
- oligopeptide transmembrane transporter activity Source: InterPro
Keywordsi
Biological process | Transport |
Names & Taxonomyi
Protein namesi | Recommended name: Probable metal-nicotianamine transporter YSL6Alternative name(s): Protein YELLOW STRIPE LIKE 6 Short name: OsYSL6 |
Gene namesi | Name:YSL6 Ordered Locus Names:Os04g0390500, LOC_Os04g32050 ORF Names:OsJ_014022, OSJNBa0055C08.1 |
Organismi | Oryza sativa subsp. japonica (Rice) |
Taxonomic identifieri | 39947 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa |
Proteomesi |
|
Subcellular locationi
Other locations
- Membrane Curated; Multi-pass membrane protein Curated
Vacuole
- vacuolar membrane Source: GO_Central
Other locations
- integral component of membrane Source: UniProtKB-KW
- membrane Source: GO_Central
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 41 – 61 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 65 – 85 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 113 – 133 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 158 – 178 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 226 – 246 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 279 – 299 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 324 – 344 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 394 – 414 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 419 – 439 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 467 – 487 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 512 – 532 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 561 – 581 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 606 – 626 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 641 – 661 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000363869 | 1 – 678 | Probable metal-nicotianamine transporter YSL6Add BLAST | 678 |
Proteomic databases
PaxDbi | Q7XRV2 |
Expressioni
Tissue specificityi
Expressed in roots and leaves.2 Publications
Gene expression databases
ExpressionAtlasi | Q7XRV2, baseline and differential |
Genevisiblei | Q7XRV2, OS |
Structurei
3D structure databases
AlphaFoldDBi | Q7XRV2 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family & Domainsi
Sequence similaritiesi
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG502QQ2H, Eukaryota |
InParanoidi | Q7XRV2 |
OMAi | AGNQVRQ |
OrthoDBi | 525938at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR004813, OPT IPR045035, YSL-like |
PANTHERi | PTHR31645, PTHR31645, 1 hit |
Pfami | View protein in Pfam PF03169, OPT, 1 hit |
TIGRFAMsi | TIGR00728, OPT_sfam, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
Q7XRV2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGSVADDAEI TGPLLAAAAG GGGDSAAAAG VERVPAWREQ VTVRGIVVSA
60 70 80 90 100
VLGVLFCLIT HKLNLTVGVI PSLNVSAGLL GYFLVRSWTA VLGRLGFVIA
110 120 130 140 150
PFTKQENTVI QTCVVACYGL AFSGGFGSYM LAMDQKTYEL IGPDYPGNRA
160 170 180 190 200
IDVMNPSLGW MIGFMFVVSF LGLFSLVALR KVMVIDYKLT YPSGTATAML
210 220 230 240 250
INSFHTTSGA ELAEKQVSCL GKYLSISFFW NCFKWFFSGV GDSCGFDNFP
260 270 280 290 300
SLGLAAFKNT FYFDFSPTYI GCGLICPHIV NCSTLLGAII SWGFLWPYIS
310 320 330 340 350
TKAGDWYPAN LGSNDFKGLY GYKVFISVSV ILGDGLYNLI KIIYATIKEV
360 370 380 390 400
MNARSKQGRL PLVRVHDDDE GSKLSAEEKL RNDTFLKDRI PSWLAGSGYV
410 420 430 440 450
GLAAISTATV PMIFPQVKWY LVLCAYVVAP LLAFCNSYGC GLTDWNLAST
460 470 480 490 500
YGKIGLFIFA SLVGRSGGVI AGLAACGVMM SIVSTAADLM QDFRTGYLTL
510 520 530 540 550
SSPRSMFVSQ LIGTTLGCII APLTFWLYWT AFDIGNPDGM FKAPYAVIYR
560 570 580 590 600
EMSILGVEGF SALPQHCLAI CSVFFVAAIL INLLRDVTPK SVSKFIPLPM
610 620 630 640 650
AMAVPFYIGA YFAIDMFVGT VILFVWERVN RKESEDFAGA IASGLICGDG
660 670
IWSVPSAILS IMRIDPPMCM YFKPSLTS
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A0N7KIZ1 | A0A0N7KIZ1_ORYSJ | Os04g0390500 protein | Os04g0390500, OSNPB_040390500 | 441 | Annotation score: | ||
A0A0P0WA50 | A0A0P0WA50_ORYSJ | Os04g0390500 protein | Os04g0390500, OSNPB_040390500 | 648 | Annotation score: |
Sequence cautioni
The sequence BAF14554 differs from that shown. Reason: Erroneous gene model prediction.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 22 – 24 | GGD → AGN in EAZ30539 (PubMed:15685292).Curated | 3 | |
Sequence conflicti | 31 – 32 | VE → LK in EAZ30539 (PubMed:15685292).Curated | 2 | |
Sequence conflicti | 572 | S → L in BAE91886 (PubMed:15255870).Curated | 1 | |
Sequence conflicti | 577 | A → V in BAE91886 (PubMed:15255870).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB190916 mRNA Translation: BAE91886.1 AL731600 Genomic DNA Translation: CAE02278.1 AP008210 Genomic DNA Translation: BAF14554.2 Sequence problems. AP014960 Genomic DNA Translation: BAS88960.1 CM000141 Genomic DNA Translation: EAZ30539.1 AK100148 mRNA Translation: BAG94466.1 |
RefSeqi | XP_015635791.1, XM_015780305.1 |
Genome annotation databases
EnsemblPlantsi | Os04t0390500-02; Os04t0390500-02; Os04g0390500 Os04t0390500-03; Os04t0390500-03; Os04g0390500 |
GeneIDi | 4335676 |
Gramenei | Os04t0390500-02; Os04t0390500-02; Os04g0390500 Os04t0390500-03; Os04t0390500-03; Os04g0390500 |
KEGGi | osa:4335676 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB190916 mRNA Translation: BAE91886.1 AL731600 Genomic DNA Translation: CAE02278.1 AP008210 Genomic DNA Translation: BAF14554.2 Sequence problems. AP014960 Genomic DNA Translation: BAS88960.1 CM000141 Genomic DNA Translation: EAZ30539.1 AK100148 mRNA Translation: BAG94466.1 |
RefSeqi | XP_015635791.1, XM_015780305.1 |
3D structure databases
AlphaFoldDBi | Q7XRV2 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 4530.OS04T0390500-02 |
Proteomic databases
PaxDbi | Q7XRV2 |
Genome annotation databases
EnsemblPlantsi | Os04t0390500-02; Os04t0390500-02; Os04g0390500 Os04t0390500-03; Os04t0390500-03; Os04g0390500 |
GeneIDi | 4335676 |
Gramenei | Os04t0390500-02; Os04t0390500-02; Os04g0390500 Os04t0390500-03; Os04t0390500-03; Os04g0390500 |
KEGGi | osa:4335676 |
Phylogenomic databases
eggNOGi | ENOG502QQ2H, Eukaryota |
InParanoidi | Q7XRV2 |
OMAi | AGNQVRQ |
OrthoDBi | 525938at2759 |
Gene expression databases
ExpressionAtlasi | Q7XRV2, baseline and differential |
Genevisiblei | Q7XRV2, OS |
Family and domain databases
InterProi | View protein in InterPro IPR004813, OPT IPR045035, YSL-like |
PANTHERi | PTHR31645, PTHR31645, 1 hit |
Pfami | View protein in Pfam PF03169, OPT, 1 hit |
TIGRFAMsi | TIGR00728, OPT_sfam, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YSL6_ORYSJ | |
Accessioni | Q7XRV2Primary (citable) accession number: Q7XRV2 Secondary accession number(s): A3ATA0, Q25CI0 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 3, 2009 |
Last sequence update: | October 1, 2003 | |
Last modified: | May 25, 2022 | |
This is version 92 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Oryza sativa (rice)
Index of Oryza sativa entries and their corresponding gene designations - SIMILARITY comments
Index of protein domains and families