Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Os07g0249100 protein

Gene

P0021G06.106

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Os07g0249100 proteinImported
Submitted name:
Putative pentatricopeptide (PPR) repeat-containing proteinImported
Submitted name:
cDNA clone:J013092H05, full insert sequenceImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:P0021G06.106Imported
Ordered Locus Names:Os07g0249100Imported
ORF Names:OSNPB_070249100Imported, P0639B07.35Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 7

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
39947.LOC_Os07g14530.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati143 – 177PPRPROSITE-ProRule annotationAdd BLAST35
Repeati178 – 212PPRPROSITE-ProRule annotationAdd BLAST35
Repeati213 – 247PPRPROSITE-ProRule annotationAdd BLAST35
Repeati248 – 282PPRPROSITE-ProRule annotationAdd BLAST35
Repeati283 – 317PPRPROSITE-ProRule annotationAdd BLAST35
Repeati318 – 352PPRPROSITE-ProRule annotationAdd BLAST35
Repeati353 – 383PPRPROSITE-ProRule annotationAdd BLAST31
Repeati387 – 421PPRPROSITE-ProRule annotationAdd BLAST35
Repeati422 – 456PPRPROSITE-ProRule annotationAdd BLAST35
Repeati457 – 491PPRPROSITE-ProRule annotationAdd BLAST35
Repeati492 – 526PPRPROSITE-ProRule annotationAdd BLAST35
Repeati527 – 561PPRPROSITE-ProRule annotationAdd BLAST35
Repeati562 – 596PPRPROSITE-ProRule annotationAdd BLAST35
Repeati597 – 631PPRPROSITE-ProRule annotationAdd BLAST35
Repeati632 – 666PPRPROSITE-ProRule annotationAdd BLAST35
Repeati667 – 701PPRPROSITE-ProRule annotationAdd BLAST35
Repeati702 – 736PPRPROSITE-ProRule annotationAdd BLAST35
Repeati737 – 771PPRPROSITE-ProRule annotationAdd BLAST35
Repeati772 – 806PPRPROSITE-ProRule annotationAdd BLAST35
Repeati807 – 841PPRPROSITE-ProRule annotationAdd BLAST35

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG4197 Eukaryota
ENOG410Z7Z7 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000242227

Identification of Orthologs from Complete Genome Data

More...
OMAi
GSCLEPD

Database of Orthologous Groups

More...
OrthoDBi
EOG09360199

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.10, 7 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01535 PPR, 4 hits
PF12854 PPR_1, 3 hits
PF13041 PPR_2, 6 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48452 SSF48452, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00756 PPR, 19 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51375 PPR, 20 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q7XHS8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAAALRTPA TRRPLLAPLS ILRTPTPRHL SSSSPPSQPP SSPAGELLRL
60 70 80 90 100
LSAAPTWTPD LARAVSSTFS ASPTADVVIS VLRSIRNPSL AAPFFLLASS
110 120 130 140 150
SSASAPHPLP ADAYHAVLPF LHHDLAALEK VLEEMAVLGY GLPNQACAHL
160 170 180 190 200
AAALVRARRL DDAVLAVAVM RRLKFRPAFS AYTVLIGALA EARRPERALE
210 220 230 240 250
LLRQMQEVGY EVGVHLFTTL VRALAREGQV ADALALVDEV KGSCLEPDIV
260 270 280 290 300
LYNVCIDCFG KAGNVDMAWK FFHELKAQGL KPDDVSYTSM IWVLCKAGRL
310 320 330 340 350
GEAEELFAQM EAERSVPCAY AYNTMIMGYG SAGRFEDAYK LLERLRERGC
360 370 380 390 400
IPSVVSFNSI LTCLGKKRKV DEALSLFEVM KKDAEPNSST YNIIIDMLCL
410 420 430 440 450
GGRVEEAYRI LDEMEHASLF PNLLTVNIMV DRLCKARKLE EAYKIFESAS
460 470 480 490 500
QRGCNPDCVT YCSLIDGLGK KGQVDEAYRL FEKMLDAGHN ANPVVYTSLI
510 520 530 540 550
RNFFIHGRKE DGHKIFKELI RRGCKPDLTL LNTYMDCVFK AGEVEKGRMI
560 570 580 590 600
FEDIRSYGFL PDVRSYSILI HGLTKAGQAR ETSNIFHAMK QQGFALDARA
610 620 630 640 650
YNAVVDGFCK SGKVHKAYEI LEEMKEKCVQ PTVATYGAIV DGLAKIDRLD
660 670 680 690 700
EAYMLFEEAK SKGIELNVVL YSSLIDGFGK VGRIDEAYLI LEEMMKKGLT
710 720 730 740 750
PNVYTWNSLL DALVKAEEIN EALVCFQSMK EMKCPPNTYT YSILINGLCR
760 770 780 790 800
VQKYNKAFVF WQDMQKQGLV PNVVTYTTMI SGLAKVGNIT DAYSLFERFK
810 820 830 840 850
ANGGIPDAAS FNALIEGMSN ANRAMEAYQV FEETRLRGCR INIKSCISLL
860 870 880
DALNKSECLE QAAIVGAVLR EIAKSQHASR SL
Length:882
Mass (Da):97,592
Last modified:October 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9B4988D7488FC202
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AP005183 Genomic DNA Translation: BAC80051.1
AP004344 Genomic DNA Translation: BAD30659.1
AP008213 Genomic DNA Translation: BAF21204.1
AK120414 mRNA Translation: BAH00002.1
AP014963 Genomic DNA Translation: BAT00829.1

NCBI Reference Sequences

More...
RefSeqi
XP_015647722.1, XM_015792236.1
XP_015647724.1, XM_015792238.1
XP_015647725.1, XM_015792239.1
XP_015647726.1, XM_015792240.1
XP_015647727.1, XM_015792241.1

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Os.100989
Os.82393

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
Os07t0249100-01; Os07t0249100-01; Os07g0249100
Os07t0249100-02; Os07t0249100-02; Os07g0249100

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
4342835

Gramene; a comparative resource for plants

More...
Gramenei
Os07t0249100-01; Os07t0249100-01; Os07g0249100
Os07t0249100-02; Os07t0249100-02; Os07g0249100

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
osa:4342835

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005183 Genomic DNA Translation: BAC80051.1
AP004344 Genomic DNA Translation: BAD30659.1
AP008213 Genomic DNA Translation: BAF21204.1
AK120414 mRNA Translation: BAH00002.1
AP014963 Genomic DNA Translation: BAT00829.1
RefSeqiXP_015647722.1, XM_015792236.1
XP_015647724.1, XM_015792238.1
XP_015647725.1, XM_015792239.1
XP_015647726.1, XM_015792240.1
XP_015647727.1, XM_015792241.1
UniGeneiOs.100989
Os.82393

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

STRINGi39947.LOC_Os07g14530.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOs07t0249100-01; Os07t0249100-01; Os07g0249100
Os07t0249100-02; Os07t0249100-02; Os07g0249100
GeneIDi4342835
GrameneiOs07t0249100-01; Os07t0249100-01; Os07g0249100
Os07t0249100-02; Os07t0249100-02; Os07g0249100
KEGGiosa:4342835

Phylogenomic databases

eggNOGiKOG4197 Eukaryota
ENOG410Z7Z7 LUCA
HOGENOMiHOG000242227
OMAiGSCLEPD
OrthoDBiEOG09360199

Family and domain databases

Gene3Di1.25.40.10, 7 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 4 hits
PF12854 PPR_1, 3 hits
PF13041 PPR_2, 6 hits
SUPFAMiSSF48452 SSF48452, 1 hit
TIGRFAMsiTIGR00756 PPR, 19 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 20 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ7XHS8_ORYSJ
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q7XHS8
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: November 7, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again