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UniProtKB - Q7XD96 (DCL3B_ORYSJ)

Entry version 103 (10 Apr 2019)
Sequence version 2 (07 Jul 2009)
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Protein

Endoribonuclease Dicer homolog 3b

Gene

DCL3B

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probably involved in the RNA silencing pathway. May cleave double-stranded RNA to produce short 21-24 nucleotides (nt) RNAs which target the selective destruction of complementary RNAs (By similarity).By similarity

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Mg2+By similarity, Mn2+By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi1214Magnesium or manganeseBy similarity1
<p>This subsection describes interesting single amino acid sites on the sequence that are not defined in any other subsection. This subsection can be displayed in different sections (‘Function’, ‘PTM / Processing’, ‘Pathology and Biotech’) according to its content.<p><a href='/help/site' target='_top'>More...</a></p>Sitei1305Important for activityBy similarity1
Metal bindingi1309Magnesium or manganeseBy similarity1
Metal bindingi1312Magnesium or manganeseBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi59 – 66ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • ATP binding Source: UniProtKB-KW
  • helicase activity Source: UniProtKB-KW
  • metal ion binding Source: UniProtKB-KW
  • ribonuclease III activity Source: GO_Central
  • RNA binding Source: UniProtKB-KW
View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionEndonuclease, Helicase, Hydrolase, Nuclease, RNA-binding
Biological processRNA-mediated gene silencing
LigandATP-binding, Magnesium, Manganese, Metal-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Endoribonuclease Dicer homolog 3b
Alternative name(s):
Dicer-like protein 3b (EC:3.1.26.-)
Short name:
OsDCL3b
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:DCL3B
Ordered Locus Names:Os10g0485600, LOC_Os10g34430
ORF Names:OSJNBa0029C15.23
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 10

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003784201 – 1637Endoribonuclease Dicer homolog 3bAdd BLAST1637

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q7XD96

PRoteomics IDEntifications database

More...PRIDEi		Q7XD96

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q7XD96 OS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

May interact with ARGONAUTE1 or PINHEAD through their common PAZ domains.By similarity

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		4530.OS10T0485600-00

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini46 – 222Helicase ATP-bindingPROSITE-ProRule annotationAdd BLAST177
Domaini404 – 556Helicase C-terminalPROSITE-ProRule annotationAdd BLAST153
Domaini581 – 671Dicer dsRNA-binding foldPROSITE-ProRule annotationAdd BLAST91
Domaini867 – 1006PAZPROSITE-ProRule annotationAdd BLAST140
Domaini1031 – 1200RNase III 1PROSITE-ProRule annotationAdd BLAST170
Domaini1241 – 1389RNase III 2PROSITE-ProRule annotationAdd BLAST149
Domaini1412 – 1481DRBM 1Add BLAST70
Domaini1545 – 1629DRBM 2Add BLAST85

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi169 – 172DECH box4

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the helicase family. Dicer subfamily.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410INVH Eukaryota
KOG0701 Eukaryota
COG0571 LUCA
COG1111 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000030250

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q7XD96

Family and domain databases

Conserved Domains Database

More...CDDi		cd00079 HELICc, 1 hit
cd00593 RIBOc, 2 hits

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.10.1520.10, 1 hit
3.30.160.380, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR038248 Dicer_dimer_sf
IPR005034 Dicer_dimerisation_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR003100 PAZ_dom
IPR036085 PAZ_dom_sf
IPR000999 RNase_III_dom
IPR036389 RNase_III_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00270 DEAD, 1 hit
PF03368 Dicer_dimer, 1 hit
PF00271 Helicase_C, 1 hit
PF02170 PAZ, 1 hit
PF00636 Ribonuclease_3, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SM00949 PAZ, 1 hit
SM00535 RIBOc, 2 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF101690 SSF101690, 1 hit
SSF52540 SSF52540, 1 hit
SSF69065 SSF69065, 2 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51327 DICER_DSRBF, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS50821 PAZ, 1 hit
PS00517 RNASE_3_1, 1 hit
PS50142 RNASE_3_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q7XD96-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MADDEAAVLP PPPPLPPPCR PHRQLRPRGS RPTADTTPRT SQLVEVFEAA 
        60         70         80         90        100
LRGNTIAVLD TGSGKTMVAV MLAREHARRV RAGEAPRRIV VFLAPTVHLV 
       110        120        130        140        150
HQQFEVIREY TDLDVMMCSG ASRVGEWGAD HWKEEVGRNE IVVMTPQILL 
       160        170        180        190        200
DALRHAFLTM SAVSLLIFDE CHRACGSHPY ARIMKEFYFG SQWRPDVFGM 
       210        220        230        240        250
TASPVATKGA STLHNCEAHI SQLELTLDAK IYIVEDRNEL ESFSPPTTIV 
       260        270        280        290        300
NKYYDAYMVD FDNLKSKLQI FSDEFDSLLV GLQESPSNKF KDTDNILETS 
       310        320        330        340        350
RKSLSRYHGK ILYSLNDLGP IITSEVVKIH IESVKPLCDS EDCIFSKASL 
       360        370        380        390        400
CLHMSYFKEA LSLIEEILPQ GYGELMKSES GSEELTKRGY ISSKVNTLIN 
       410        420        430        440        450
IFKSFGSSNE VLCLIFVDRI ITAKAVERFM RGIVNFSCFS ISYLTGGSTS 
       460        470        480        490        500
KDALSPAVQR FTLDLFRAGK VNLLFTTDVT EEGVDVPNCS CVIRFDLPRT 
       510        520        530        540        550
VCSYVQSRGR ARRNNSEFIL MIERGNLQQQ EHIFRMIQTG YYVKNCALYR 
       560        570        580        590        600
HPNALSYDLS IQGMYTYQVQ STGATITADC CVNLIRKYCE KLPKDRYFMP 
       610        620        630        640        650
KPSFEVTIED GLFKCTLTLP RNAAFQSIVG PLSSSSNLSK QLVSLEACKK 
       660        670        680        690        700
LHQLGELNDH LVPLTEEPMD TDFTTADEKC ISGPGTTKRK ELHGTTCVLA 
       710        720        730        740        750
LSGTWIHDSE NITLNTYRID FLCDQEGENY AGFVLLMEPE LDDDVAPSKM 
       760        770        780        790        800
DLFLIPNKMV YTTVTPRGKV QLNKKQLGKG KLFQEFFFNG IFGRLFHGSR 
       810        820        830        840        850
KSGAQRDFIF KKGHEIQWNT ESMYLLLPLR DSSYIQDDLS IHWEAIESCA 
       860        870        880        890        900
GAVEQLWSSY QGDENVIPVN CIPQKRRGGQ EEIIHLANKS LHCSSIKDSV 
       910        920        930        940        950
VLSLHTGRIY TVLDLILDTT AEDSFDEMCK GKASPFTSFV DYYHQKYGII 
       960        970        980        990       1000
IQHPEQPLLL LKQSHNAHNL LFSKLKYLDG STGKPLLMEK EQIHARVPPE 
      1010       1020       1030       1040       1050
LLIHLDVTTD ILKSFYLLPS VIHRLQSLML ASQLRREIGY NQHIPVTLIL 
      1060       1070       1080       1090       1100
EAITTLRCCE TFSLERLELL GDSVLKYVVG CDLFLRYPMK HEGQLSDMRS 
      1110       1120       1130       1140       1150
KAVCNATLHK HGIWRSLQGY VRDNAFDPRR WVAPGQISLR PFPCNCGIET 
      1160       1170       1180       1190       1200
AFVPSHRRYI RDDPSFFVGK PCDRGHRWMC SKTISDCVEA LVGAYYVGGG 
      1210       1220       1230       1240       1250
IAAALWVMRW FGIDIKCDMK LLQEVKFNAS HLCSLSKIND IEELEAKLKY 
      1260       1270       1280       1290       1300
NFSVKGLLLE AITHPSLQEL GVDYCYQRLE FLGDSVLDLL LTRHLYATHT 
      1310       1320       1330       1340       1350
DVDPGELTDL RSALVSNENF AQAVVRNNIH SHLQHGSGIL LEQITEYVRS 
      1360       1370       1380       1390       1400
NLECQGKESE FLQHTTCKVP KVLGDIMESI AGAVFIDTDF NVDMVWEIFE 
      1410       1420       1430       1440       1450
PLLSPLITPD KLALPPYREL LELCSHIGCF LNSKCTSKGE EVIIEMSLQL 
      1460       1470       1480       1490       1500
RDELLVAQGH DRNKKRAKAK AASRILADLK QQGLSIKQCL SKAKQLDIVT 
      1510       1520       1530       1540       1550
SDLQFDLTSS GTQLSYSDLN DYHILEGLSS VKKEVVLPLK MEKGGPRSAL 
      1560       1570       1580       1590       1600
FKLCKILQWP MPEFEFVEQR FRTPIVMDGA TTTNFNSFVS TITLHIPDAT 
      1610       1620       1630 
TITFQGERRT DKKSAQDSAS LMMLHKLQEL KICICKT
Length:1,637
Mass (Da):184,725
Last modified:July 7, 2009 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i811F2AB02659B318
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0P0XVZ5A0A0P0XVZ5_ORYSJ
Os10g0485600 protein
Os10g0485600, OSNPB_100485600
1,613Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAL59041 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAP54346 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAF26812 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AC087182 Genomic DNA Translation: AAL59041.1 Sequence problems.
DP000086 Genomic DNA Translation: AAP54346.1 Sequence problems.
AP008216 Genomic DNA Translation: BAF26812.2 Sequence problems.
AP014966 Genomic DNA No translation available.

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		Os10t0485600-01; Os10t0485600-01; Os10g0485600

Gramene; a comparative resource for plants

More...Gramenei		Os10t0485600-01; Os10t0485600-01; Os10g0485600

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC087182 Genomic DNA Translation: AAL59041.1 Sequence problems.
DP000086 Genomic DNA Translation: AAP54346.1 Sequence problems.
AP008216 Genomic DNA Translation: BAF26812.2 Sequence problems.
AP014966 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Protein-protein interaction databases

STRINGi4530.OS10T0485600-00

Proteomic databases

PaxDbiQ7XD96
PRIDEiQ7XD96

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOs10t0485600-01; Os10t0485600-01; Os10g0485600
GrameneiOs10t0485600-01; Os10t0485600-01; Os10g0485600

Phylogenomic databases

eggNOGiENOG410INVH Eukaryota
KOG0701 Eukaryota
COG0571 LUCA
COG1111 LUCA
HOGENOMiHOG000030250
InParanoidiQ7XD96

Gene expression databases

GenevisibleiQ7XD96 OS

Family and domain databases

CDDicd00079 HELICc, 1 hit
cd00593 RIBOc, 2 hits
Gene3Di1.10.1520.10, 1 hit
3.30.160.380, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR038248 Dicer_dimer_sf
IPR005034 Dicer_dimerisation_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR003100 PAZ_dom
IPR036085 PAZ_dom_sf
IPR000999 RNase_III_dom
IPR036389 RNase_III_sf
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF03368 Dicer_dimer, 1 hit
PF00271 Helicase_C, 1 hit
PF02170 PAZ, 1 hit
PF00636 Ribonuclease_3, 2 hits
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SM00949 PAZ, 1 hit
SM00535 RIBOc, 2 hits
SUPFAMiSSF101690 SSF101690, 1 hit
SSF52540 SSF52540, 1 hit
SSF69065 SSF69065, 2 hits
PROSITEiView protein in PROSITE
PS51327 DICER_DSRBF, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS50821 PAZ, 1 hit
PS00517 RNASE_3_1, 1 hit
PS50142 RNASE_3_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiDCL3B_ORYSJ
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q7XD96
Secondary accession number(s): Q0IWV3, Q8W367
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 7, 2009
Last sequence update: July 7, 2009
Last modified: April 10, 2019
This is version 103 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
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