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Entry version 115 (03 Jul 2019)
Sequence version 1 (01 Oct 2003)
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Protein

SR-related and CTD-associated factor 4

Gene

Scaf4

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Anti-terminator protein required to prevent early mRNA termination during transcription. Together with SCAF8, acts by suppressing the use of early, alternative poly(A) sites, thereby preventing the accumulation of non-functional truncated proteins. Mechanistically, associates with the phosphorylated C-terminal heptapeptide repeat domain (CTD) of the largest RNA polymerase II subunit (POLR2A), and subsequently binds nascent RNA upstream of early polyadenylation sites to prevent premature mRNA transcript cleavage and polyadenylation. Independently of SCAF8, also acts as a suppressor of transcriptional readthrough.By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-binding
Biological processTranscription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
SR-related and CTD-associated factor 4Curated
Alternative name(s):
CTD-binding SR-like protein RA4Curated
Splicing factor, arginine/serine-rich 15Curated
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Scaf4Imported
Synonyms:Kiaa11721 Publication, Srsf15Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2146350 Scaf4

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004476311 – 1183SR-related and CTD-associated factor 4Add BLAST1183

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei49N6-acetyllysineBy similarity1
Modified residuei154PhosphoserineBy similarity1
Modified residuei717PhosphoserineBy similarity1
Modified residuei1042PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Methylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q7TSH6

PeptideAtlas

More...
PeptideAtlasi
Q69ZP8

PRoteomics IDEntifications database

More...
PRIDEi
Q69ZP8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000022983 Expressed in 300 organ(s), highest expression level in heart

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with POLR2A; via C-terminal heptapeptide repeat domain (CTD) phosphorylated at 'Ser-2' and 'Ser-5'.

By similarity

GO - Molecular functioni

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q7TSH6

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 139CIDPROSITE-ProRule annotationAdd BLAST139
Domaini569 – 643RRMPROSITE-ProRule annotationAdd BLAST75

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi190 – 243Gln-richPROSITE-ProRule annotationAdd BLAST54
Compositional biasi285 – 474Pro-richPROSITE-ProRule annotationAdd BLAST190
Compositional biasi322 – 483Gln-richPROSITE-ProRule annotationAdd BLAST162
Compositional biasi497 – 552Arg-richPROSITE-ProRule annotationAdd BLAST56
Compositional biasi715 – 1019Pro-richPROSITE-ProRule annotationAdd BLAST305
Compositional biasi980 – 1028Gln-richPROSITE-ProRule annotationAdd BLAST49
Compositional biasi1022 – 1108Arg-richPROSITE-ProRule annotationAdd BLAST87

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0132 Eukaryota
ENOG410ZIX2 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00530000063946

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000143432

KEGG Orthology (KO)

More...
KOi
K13167

Identification of Orthologs from Complete Genome Data

More...
OMAi
FPPMAQS

Database of Orthologous Groups

More...
OrthoDBi
821342at2759

TreeFam database of animal gene trees

More...
TreeFami
TF324527

Family and domain databases

Conserved Domains Database

More...
CDDi
cd03562 CID, 1 hit
cd12461 RRM_SCAF4, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.90, 1 hit
3.30.70.330, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR006569 CID_dom
IPR008942 ENTH_VHS
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR006903 RNA_pol_II-bd
IPR000504 RRM_dom
IPR034369 SCAF4_RRM

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF04818 CTD_bind, 1 hit
PF00076 RRM_1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00582 RPR, 1 hit
SM00360 RRM, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48464 SSF48464, 1 hit
SSF54928 SSF54928, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51391 CID, 1 hit
PS50102 RRM, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q7TSH6-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MDAVNAFNQE LFSLMDMKPP ISRAKMILIT KAAIKAIKLY KHVVQIVEKF
60 70 80 90 100
IKKCKPEYKV PGLYVIDSIV RQSRHQFGTD KDVFGPRFSK NITATFQYLY
110 120 130 140 150
LCPSEDKSKI VRVLNLWQKN GVFKIEIIQP LLDMAAGTSN AAPVAENVTN
160 170 180 190 200
NEGSPPPPVK ISSELAQAPT NSMPTVAQLP SSDAFAAVAQ LFQTTQGQQL
210 220 230 240 250
QQILQTFQQP PQPQSPALDS AVMAQVQAIT AQLKTAPTQP PEQKTAFDKK
260 270 280 290 300
LLDRFDYDDE PEAVEDSKKE DAAAISTAAL ATAAPPAPTA ATPAVATAVP
310 320 330 340 350
VPSATSPPPP QTPFGYPGDG VQQPAYTQHQ SMDQFQPRMM PIQQDTMHHQ
360 370 380 390 400
VPLPPNGQMP GFGLLSAPPP FPPMPQPGMP QPGMAQPGLA QPGMAQPTMP
410 420 430 440 450
QPGMPQPGMP QPGMAQPGLA QPGMAQPGMP QPAMPQPAMP QPGMAQPGVS
460 470 480 490 500
PAPPVQPTFQ STFQPQNEPH SQKPHQQEME VEQPCVTEVK RHVPESRKSR
510 520 530 540 550
SRSPKRRRSR SGSRSRRSRH RRSRSRSRDR RRHSPRSRSQ ERRDREKERE
560 570 580 590 600
RRQKGLPQIK SETASVCSTT LWVGQLDKRT TQQDVASLLE EFGPIESINM
610 620 630 640 650
IPPRGCAYIV MVHRQDAYRA LQKLSRGNYK VNQKSIKIAW ALNKGIKADY
660 670 680 690 700
KQYWDVELGV TYIPWDKVKA EELESFCEGG MLDSDTLNPD WKGIPKKPDN
710 720 730 740 750
EVAQNGGAET SHTEPVSPIP KPVPVPVPPI PVPAPITVPP PQVPPHQPGP
760 770 780 790 800
PVVGALQPPA FTPPLGMPPP GFGPGVPPPP PPPPFLRPGF NPMHLPPGFL
810 820 830 840 850
PPGPPPPITP PVSIPPPHTP PISIPNLVSG ARGNAESGDS AKMYGSAGPP
860 870 880 890 900
AAPTSLPTPP VTQPVSLLGT QGVAPGPVIG LQAPSTGLLG ARPGLIPLQR
910 920 930 940 950
PPGMPPPHLQ RFPMMPPRPM PPHMMHRGPP PGPGGFAMPP PHGMKGPFPP
960 970 980 990 1000
HGPFVRPGGM PGLGGPGPGP GASEDRDGRQ QQPQQQPPPQ QQQQQQQPQQ
1010 1020 1030 1040 1050
QPPQQSPSQQ PAPAQQQPPQ FRNDSRQQFN SGRDQERFGR RSFGSRVEND
1060 1070 1080 1090 1100
RERYGSRNDD RDNSNRERRE WGRRSPDRDR HRDLEERSRR SSGHRDRDRD
1110 1120 1130 1140 1150
SRDRESRREK EENRKEKHEV ADRAGGNKAV EPPLSQVGTI DTVSELNKGE
1160 1170 1180
AMATVVKPEE SPAEVTSPVG PEKDPGSAAE PPR
Length:1,183
Mass (Da):129,056
Last modified:October 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i525A0CD9AEB7213B
GO
Isoform 2 (identifier: Q7TSH6-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     477-477: Q → QV

Show »
Length:1,184
Mass (Da):129,155
Checksum:iAEC16674184E2F5E
GO
Isoform 3 (identifier: Q7TSH6-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     501-501: S → SRSAS
     827-827: L → STIAGINEDTTKDLSIGNPIPTV

Show »
Length:1,209
Mass (Da):131,682
Checksum:iB1C0508FDF35D5CC
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH24860 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence BAD32398 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti326Y → C in BAD32398 (PubMed:15368895).Curated1
Sequence conflicti954F → L in AAH24860 (PubMed:15489334).Curated1
Sequence conflicti999Missing in BAD32398 (PubMed:15368895).Curated1
Sequence conflicti1165V → A in BAD32398 (PubMed:15368895).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_060218477Q → QV in isoform 2. 1
Alternative sequenceiVSP_060219501S → SRSAS in isoform 3. 1
Alternative sequenceiVSP_060220827L → STIAGINEDTTKDLSIGNPI PTV in isoform 3. 1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK173120 mRNA Translation: BAD32398.1 Different initiation.
AC139573 Genomic DNA No translation available.
BC024860 mRNA Translation: AAH24860.1 Different initiation.
BC053096 mRNA Translation: AAH53096.1
BC057592 mRNA Translation: AAH57592.1

NCBI Reference Sequences

More...
RefSeqi
NP_001333728.1, NM_001346799.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000163419; ENSMUSP00000132250; ENSMUSG00000022983

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
224432

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:224432

UCSC genome browser

More...
UCSCi
uc007zwd.2 mouse

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK173120 mRNA Translation: BAD32398.1 Different initiation.
AC139573 Genomic DNA No translation available.
BC024860 mRNA Translation: AAH24860.1 Different initiation.
BC053096 mRNA Translation: AAH53096.1
BC057592 mRNA Translation: AAH57592.1
RefSeqiNP_001333728.1, NM_001346799.1

3D structure databases

SMRiQ7TSH6
ModBaseiSearch...

Proteomic databases

EPDiQ7TSH6
PeptideAtlasiQ69ZP8
PRIDEiQ69ZP8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000163419; ENSMUSP00000132250; ENSMUSG00000022983
GeneIDi224432
KEGGimmu:224432
UCSCiuc007zwd.2 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
57466
MGIiMGI:2146350 Scaf4

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiKOG0132 Eukaryota
ENOG410ZIX2 LUCA
GeneTreeiENSGT00530000063946
HOGENOMiHOG000143432
KOiK13167
OMAiFPPMAQS
OrthoDBi821342at2759
TreeFamiTF324527

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Scaf4 mouse

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000022983 Expressed in 300 organ(s), highest expression level in heart

Family and domain databases

CDDicd03562 CID, 1 hit
cd12461 RRM_SCAF4, 1 hit
Gene3Di1.25.40.90, 1 hit
3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR006569 CID_dom
IPR008942 ENTH_VHS
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR006903 RNA_pol_II-bd
IPR000504 RRM_dom
IPR034369 SCAF4_RRM
PfamiView protein in Pfam
PF04818 CTD_bind, 1 hit
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00582 RPR, 1 hit
SM00360 RRM, 1 hit
SUPFAMiSSF48464 SSF48464, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS51391 CID, 1 hit
PS50102 RRM, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSCAF4_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q7TSH6
Secondary accession number(s): A0A338P6Z6
, Q69ZP8, Q6PFF0, Q8R1B3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 3, 2019
Last sequence update: October 1, 2003
Last modified: July 3, 2019
This is version 115 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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