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Protein

Probable DNA polymerase family X

Gene

MIMI_L318

Organism
Acanthamoeba polyphaga mimivirus (APMV)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Repair polymerase.Curated

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, DNA-directed DNA polymerase, Lyase, Nucleotidyltransferase, Transferase
Biological processDNA damage, DNA repair, DNA replication, DNA synthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Probable DNA polymerase family X (EC:2.7.7.7)
Gene namesi
Ordered Locus Names:MIMI_L318
OrganismiAcanthamoeba polyphaga mimivirus (APMV)
Taxonomic identifieri212035 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageMimiviridaeMimivirus
Virus hostiAcanthamoeba polyphaga (Amoeba) [TaxID: 5757]
Proteomesi
  • UP000001134 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002187991 – 354Probable DNA polymerase family XAdd BLAST354

Structurei

3D structure databases

ProteinModelPortaliQ7T6Y4
SMRiQ7T6Y4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA polymerase type-X family.Curated

Phylogenomic databases

KOiK02330
OrthoDBiVOG090000V1

Family and domain databases

CDDicd00141 NT_POLXc, 1 hit
Gene3Di1.10.150.110, 1 hit
3.30.210.10, 1 hit
InterProiView protein in InterPro
IPR002054 DNA-dir_DNA_pol_X
IPR019843 DNA_pol-X_BS
IPR010996 DNA_pol_b-like_N
IPR028207 DNA_pol_B_palm_palm
IPR018944 DNA_pol_lambd_fingers_domain
IPR027421 DNA_pol_lamdba_lyase_dom_sf
IPR037160 DNA_Pol_thumb_sf
IPR022312 DNA_pol_X
IPR002008 DNA_pol_X_beta-like
IPR029398 PolB_thumb
PfamiView protein in Pfam
PF14792 DNA_pol_B_palm, 1 hit
PF14791 DNA_pol_B_thumb, 1 hit
PF10391 DNA_pol_lambd_f, 1 hit
PF14716 HHH_8, 1 hit
PRINTSiPR00869 DNAPOLX
PR00870 DNAPOLXBETA
SMARTiView protein in SMART
SM00483 POLXc, 1 hit
SUPFAMiSSF47802 SSF47802, 1 hit
PROSITEiView protein in PROSITE
PS00522 DNA_POLYMERASE_X, 1 hit

Sequencei

Sequence statusi: Complete.

Q7T6Y4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNSKIIEQFN LLEKQVDAEY LNSKVENDLK EETMNRFRLK SIKKALSILK
60 70 80 90 100
NLDFEITDAN DVKGIPGIGA GTIKRIKEIL ETGKLHDLKD KFSPEKQKQI
110 120 130 140 150
EGIQELENVI GIGSSTAKKL ISQYGIRSVD DLKKAIETGK VKVSTSIMLG
160 170 180 190 200
LKYYGIVQRD IPRKEITAIE KLLSKEAHKI DPDLEIIICG SYRRGKKTSG
210 220 230 240 250
DIDVLMYHPK MKTSKEMLHP EKFDLEPYFN LYIDRLTEKG FLIDDITFNP
260 270 280 290 300
NKKYMGFCKY KLNPVRRIDI RFIPYNSLAP AMLYFTGPME LNTKMRSAAK
310 320 330 340 350
KRKMILNEYG LFKTDKNGAQ IPLDTKSEAD IFHALGMDYL TPQQRELYSS

GKIH
Length:354
Mass (Da):40,612
Last modified:December 7, 2004 - v2
Checksum:iBF25ACE5AA6244E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA Translation: AAQ09576.2
RefSeqiYP_003986821.1, NC_014649.1

Genome annotation databases

GeneIDi9924935
KEGGivg:9924935

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY653733 Genomic DNA Translation: AAQ09576.2
RefSeqiYP_003986821.1, NC_014649.1

3D structure databases

ProteinModelPortaliQ7T6Y4
SMRiQ7T6Y4
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9924935
KEGGivg:9924935

Phylogenomic databases

KOiK02330
OrthoDBiVOG090000V1

Family and domain databases

CDDicd00141 NT_POLXc, 1 hit
Gene3Di1.10.150.110, 1 hit
3.30.210.10, 1 hit
InterProiView protein in InterPro
IPR002054 DNA-dir_DNA_pol_X
IPR019843 DNA_pol-X_BS
IPR010996 DNA_pol_b-like_N
IPR028207 DNA_pol_B_palm_palm
IPR018944 DNA_pol_lambd_fingers_domain
IPR027421 DNA_pol_lamdba_lyase_dom_sf
IPR037160 DNA_Pol_thumb_sf
IPR022312 DNA_pol_X
IPR002008 DNA_pol_X_beta-like
IPR029398 PolB_thumb
PfamiView protein in Pfam
PF14792 DNA_pol_B_palm, 1 hit
PF14791 DNA_pol_B_thumb, 1 hit
PF10391 DNA_pol_lambd_f, 1 hit
PF14716 HHH_8, 1 hit
PRINTSiPR00869 DNAPOLX
PR00870 DNAPOLXBETA
SMARTiView protein in SMART
SM00483 POLXc, 1 hit
SUPFAMiSSF47802 SSF47802, 1 hit
PROSITEiView protein in PROSITE
PS00522 DNA_POLYMERASE_X, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiDPOLX_MIMIV
AccessioniPrimary (citable) accession number: Q7T6Y4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: December 7, 2004
Last modified: April 25, 2018
This is version 80 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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