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Protein
Submitted name:

TRAF4 protein

Gene

traf4a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri101 – 154TRAF-typePROSITE-ProRule annotationAdd BLAST54
Zinc fingeri156 – 208TRAF-typePROSITE-ProRule annotationAdd BLAST53
Zinc fingeri210 – 266TRAF-typePROSITE-ProRule annotationAdd BLAST57

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
TRAF4 proteinImported
Submitted name:
Tnf receptor-associated factor 4aImported
Gene namesi
Name:traf4aImported
Synonyms:traf4Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Unplaced

Organism-specific databases

ZFINiZDB-GENE-040308-1 traf4a

Subcellular locationi

Expressioni

Gene expression databases

BgeeiENSDARG00000003963

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000013849

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 58RING-typeInterPro annotationAdd BLAST41
Domaini101 – 154TRAF-typeInterPro annotationAdd BLAST54
Domaini156 – 208TRAF-typeInterPro annotationAdd BLAST53
Domaini210 – 266TRAF-typeInterPro annotationAdd BLAST57
Domaini307 – 462MATHInterPro annotationAdd BLAST156

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili285 – 305Sequence analysisAdd BLAST21

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri101 – 154TRAF-typePROSITE-ProRule annotationAdd BLAST54
Zinc fingeri156 – 208TRAF-typePROSITE-ProRule annotationAdd BLAST53
Zinc fingeri210 – 266TRAF-typePROSITE-ProRule annotationAdd BLAST57

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0297 Eukaryota
ENOG410Z7YX LUCA
GeneTreeiENSGT00550000074359
HOGENOMiHOG000004841
HOVERGENiHBG103438
KOiK09848
OMAiCDAGPIA
OrthoDBiEOG091G0GHD
TreeFamiTF321154

Family and domain databases

CDDicd03781 MATH_TRAF4, 1 hit
Gene3Di2.60.210.10, 1 hit
3.30.40.10, 4 hits
InterProiView protein in InterPro
IPR002083 MATH/TRAF_dom
IPR012227 TNF_rcpt--assoc_TRAF
IPR008974 TRAF-like
IPR027138 TRAF4
IPR037307 TRAF4_MATH
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
IPR001293 Znf_TRAF
PANTHERiPTHR10131:SF118 PTHR10131:SF118, 2 hits
PfamiView protein in Pfam
PF00917 MATH, 1 hit
PF02176 zf-TRAF, 2 hits
PIRSFiPIRSF015614 TRAF, 1 hit
SMARTiView protein in SMART
SM00061 MATH, 1 hit
SM00184 RING, 1 hit
SUPFAMiSSF49599 SSF49599, 4 hits
PROSITEiView protein in PROSITE
PS50144 MATH, 1 hit
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
PS50145 ZF_TRAF, 3 hits

Sequencei

Sequence statusi: Complete.

Q7T1K2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGFDYKFLE KPKRRFQCPL CSKAMREPVQ VSTCGHRFCD TCLQEFLSEG
60 70 80 90 100
VFKCPEDQLP LDYAKIYPDP ELEQQILALP IRCIHSEEGC RWTGQMKQLQ
110 120 130 140 150
SHFSTCAFNV IPCPNRCSVK LTRRDLPEHL QHDCPKRKVK CEFCGSEFTG
160 170 180 190 200
EAYENHQGIC PQESVYCENK CGARMMRRLL SQHTMTECPK RTQPCKYCGK
210 220 230 240 250
EFVYDTIQNH QYHCPRFPVQ CPNQCGTPNI AREDLANHVK ESCGSALVLC
260 270 280 290 300
PFKEAGCKHR CPKMAIGRHL EESTKSHLTM MCSLVGRQRQ EILELRREME
310 320 330 340 350
ELSVSHDGVL IWKLTDYSRK LQEAKLRNNH EFFSPPFYTH RYGYKLQVSA
360 370 380 390 400
FLNGNGSGEG SHLSIYIRVL PGEYDNLLEW PFSYKVTFSI LDQSDPSLSK
410 420 430 440 450
PQHITETFNP DPNWKNFQKP CSSRNSLDES TLGFGYPKFI SHEEIKKRNY
460 470
IRDNSIFLKA SIEIPQKIMA
Length:470
Mass (Da):54,427
Last modified:October 1, 2003 - v1
Checksum:iB4CEA2AE913363D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR392353 Genomic DNA No translation available.
CR848661 Genomic DNA No translation available.
CR855391 Genomic DNA No translation available.
BC065969 mRNA Translation: AAH65969.1
AJ556548 mRNA Translation: CAD89005.1
RefSeqiNP_991325.1, NM_205762.1
UniGeneiDr.81750

Genome annotation databases

EnsembliENSDART00000016024; ENSDARP00000013849; ENSDARG00000003963
ENSDART00000184122; ENSDARP00000156311; ENSDARG00000109586
GeneIDi404045
KEGGidre:404045

Similar proteinsi

Entry informationi

Entry nameiQ7T1K2_DANRE
AccessioniPrimary (citable) accession number: Q7T1K2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: July 18, 2018
This is version 145 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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