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Protein

Probable xyloglucan glycosyltransferase 3

Gene

CSLC3

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (By similarity).By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei300Sequence analysis1
Binding sitei359SubstrateSequence analysis1
Binding sitei361SubstrateSequence analysis1
Active sitei453Sequence analysis1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processCell wall biogenesis/degradation

Protein family/group databases

CAZyiGT2 Glycosyltransferase Family 2

Names & Taxonomyi

Protein namesi
Recommended name:
Probable xyloglucan glycosyltransferase 3 (EC:2.4.1.-)
Alternative name(s):
Cellulose synthase-like protein C3
OsCslC3
Gene namesi
Name:CSLC3
Ordered Locus Names:Os08g0253800, LOC_Os08g15420
ORF Names:OJ1112_D12.1, OJ1575_B01.13
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei116 – 136HelicalSequence analysisAdd BLAST21
Transmembranei196 – 216HelicalSequence analysisAdd BLAST21
Transmembranei531 – 551HelicalSequence analysisAdd BLAST21
Transmembranei556 – 576HelicalSequence analysisAdd BLAST21
Transmembranei695 – 715HelicalSequence analysisAdd BLAST21
Transmembranei720 – 740HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003193851 – 745Probable xyloglucan glycosyltransferase 3Add BLAST745

Proteomic databases

PaxDbiQ7PC69
PRIDEiQ7PC69

Expressioni

Gene expression databases

ExpressionAtlasiQ7PC69 differential
GenevisibleiQ7PC69 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g15420.1

Structurei

3D structure databases

ProteinModelPortaliQ7PC69
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IIMW Eukaryota
COG1215 LUCA
InParanoidiQ7PC69
OrthoDBiEOG093605FN

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR029044 Nucleotide-diphossugar_trans
SUPFAMiSSF53448 SSF53448, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q7PC69-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAPPPNTYSE SWWGGKEERG TPVVVKMDNP YSLVEIDGPG MAAPSEKARG
60 70 80 90 100
KNAKQLTWVL LLRAHRAVGC VAWLAAGFWA VLGAVNRRVR RSRDADAEPD
110 120 130 140 150
AEASGRGRAM LRFLRGFLLL SLAMLAFETV AHLKGWHFPR SAAGLPEKYL
160 170 180 190 200
RRLPEHLQHL PEHLRRHLPE HLRMPEKEEI EGWLHRAYVA WLAFRIDYIA
210 220 230 240 250
WAIQKLSGFC IALFMVQSVD RLVLCLGCFW IKLRGIKPVA DTSISNDDIE
260 270 280 290 300
ATAGDGGGYF PMVLIQMPMC NEKEVYETSI SHVCQIDWPR ERMLVQVLDD
310 320 330 340 350
SDDETCQMLI KAEVTKWSQR GVNIIYRHRL NRTGYKAGNL KSAMSCDYVR
360 370 380 390 400
DYEFVAIFDA DFQPNPDFLK LTVPHFKGNP ELGLVQARWS FVNKDENLLT
410 420 430 440 450
RLQNINLCFH FEVEQQVNGV YLSFFGFNGT AGVWRIKALE DSGGWMERTT
460 470 480 490 500
VEDMDIAVRA HLNGWKFIFL NDVKVLCELP ESYQAYRKQQ HRWHSGPMQL
510 520 530 540 550
FRLCLPAVFK SKISTWKKAN LVMLFFLLRK LILPFYSFTL FCVILPLTMF
560 570 580 590 600
VPEAELPIWV ICYVPVIMSV LNILPAPKSF PFVIPYLLFE NTMSVTKFNA
610 620 630 640 650
MVSGLFQLGS SYEWVVTKKA GRTSSESDIL ALAEAADADA RPPPAKLHRG
660 670 680 690 700
VSEGGLKEWA KLHKEQEDAT AAAAAAAAPG TPVKKSKAAK APNRIFKKEL
710 720 730 740
ALAFLLLTAA TRSLLSAQGL HFYFLLFQGV TFLAVGLDLI GEQVS
Length:745
Mass (Da):84,145
Last modified:December 15, 2003 - v1
Checksum:iC2F1269E8BC2A364
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0P0XDR2A0A0P0XDR2_ORYSJ
Os08g0253800 protein
Os08g0253800 OSNPB_080253800
479Annotation score:

Sequence cautioni

The sequence BAF23293 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004013 Genomic DNA Translation: BAC98512.1
AP004155 Genomic DNA Translation: BAC98530.1
AP008214 Genomic DNA Translation: BAF23293.1 Different initiation.
AP014964 Genomic DNA No translation available.
AK108045 mRNA No translation available.
BK000088 Genomic DNA Translation: DAA01751.1
RefSeqiXP_015648421.1, XM_015792935.1
XP_015648422.1, XM_015792936.1
UniGeneiOs.55417

Genome annotation databases

GeneIDi4345095
KEGGiosa:4345095

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004013 Genomic DNA Translation: BAC98512.1
AP004155 Genomic DNA Translation: BAC98530.1
AP008214 Genomic DNA Translation: BAF23293.1 Different initiation.
AP014964 Genomic DNA No translation available.
AK108045 mRNA No translation available.
BK000088 Genomic DNA Translation: DAA01751.1
RefSeqiXP_015648421.1, XM_015792935.1
XP_015648422.1, XM_015792936.1
UniGeneiOs.55417

3D structure databases

ProteinModelPortaliQ7PC69
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os08g15420.1

Protein family/group databases

CAZyiGT2 Glycosyltransferase Family 2

Proteomic databases

PaxDbiQ7PC69
PRIDEiQ7PC69

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4345095
KEGGiosa:4345095

Phylogenomic databases

eggNOGiENOG410IIMW Eukaryota
COG1215 LUCA
InParanoidiQ7PC69
OrthoDBiEOG093605FN

Gene expression databases

ExpressionAtlasiQ7PC69 differential
GenevisibleiQ7PC69 OS

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR029044 Nucleotide-diphossugar_trans
SUPFAMiSSF53448 SSF53448, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCSLC3_ORYSJ
AccessioniPrimary (citable) accession number: Q7PC69
Secondary accession number(s): Q0J6X2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: December 15, 2003
Last modified: October 10, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
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