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Protein

Tyrosine recombinase XerH

Gene

xerH

Organism
Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) (Vibrio succinogenes)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei207UniRule annotation1
Active sitei231UniRule annotation1
Active sitei303UniRule annotation1
Active sitei306UniRule annotation1
Active sitei329UniRule annotation1
Active sitei338O-(3'-phospho-DNA)-tyrosine intermediateUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotation
Biological processCell cycle, Cell divisionUniRule annotation, DNA integrationUniRule annotation, DNA recombinationUniRule annotation

Enzyme and pathway databases

BioCyciWSUC273121:G1GTD-1169-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Tyrosine recombinase XerHUniRule annotation
Gene namesi
Name:xerHUniRule annotation
Ordered Locus Names:WS1221Imported
OrganismiWolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) (Vibrio succinogenes)Imported
Taxonomic identifieri273121 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeWolinella
Proteomesi
  • UP000000422 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi273121.WS1221

Structurei

3D structure databases

ProteinModelPortaliQ7M937
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini168 – 342Phage_integraseInterPro annotationAdd BLAST175

Sequence similaritiesi

Belongs to the 'phage' integrase family. XerH subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108EU4 Bacteria
COG0582 LUCA
HOGENOMiHOG000102638
KOiK04763
OMAiEKNGAHM
OrthoDBiPOG091H00PN

Family and domain databases

Gene3Di1.10.443.10, 1 hit
HAMAPiMF_02054 Recomb_XerH, 1 hit
InterProiView protein in InterPro
IPR011010 DNA_brk_join_enz
IPR013762 Integrase-like_cat_sf
IPR002104 Integrase_catalytic
IPR033683 XerH
PfamiView protein in Pfam
PF00589 Phage_integrase, 1 hit
SUPFAMiSSF56349 SSF56349, 1 hit

Sequencei

Sequence statusi: Complete.

Q7M937-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRYPIDFKDR FEETLLFWME RFVRNKVTTL SNHQVKERKR LDAVLLKLTR
60 70 80 90 100
GITNIEELKW CGKEARNAGL IGINTYVNPL IKLYERLSYL GLASMKEIDE
110 120 130 140 150
EMLSDYLVIA TSGLSDASKK NHRIALLSFF GYIDKQNQDD QGNSHLFRIE
160 170 180 190 200
LKNWGGLRGK SGEKLPAYMN EKELERFLEA LDSYEFSLDI RARNRLVIKL
210 220 230 240 250
ILYTGIRVSE ALGLRLKDFL PDQDSYLLKI RGKGNKERMV MVKKEPIQKE
260 270 280 290 300
LDEWLGVRQS LNAQEDWLFC NQKGGRLTQA YVSRIVEQIL LWAGIRKEKN
310 320 330 340 350
GAHMLRHSFA TLLYQKKRDL VLVQEALGHA DLNTSRIYTH FDRERLREAA
360
SLMDDLTPKK KEN
Length:363
Mass (Da):42,403
Last modified:December 15, 2003 - v1
Checksum:iE4FD2D182985224F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571660 Genomic DNA Translation: CAE10302.1
RefSeqiWP_011139090.1, NC_005090.1

Genome annotation databases

EnsemblBacteriaiCAE10302; CAE10302; WS1221
KEGGiwsu:WS1221

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571660 Genomic DNA Translation: CAE10302.1
RefSeqiWP_011139090.1, NC_005090.1

3D structure databases

ProteinModelPortaliQ7M937
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273121.WS1221

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE10302; CAE10302; WS1221
KEGGiwsu:WS1221

Phylogenomic databases

eggNOGiENOG4108EU4 Bacteria
COG0582 LUCA
HOGENOMiHOG000102638
KOiK04763
OMAiEKNGAHM
OrthoDBiPOG091H00PN

Enzyme and pathway databases

BioCyciWSUC273121:G1GTD-1169-MONOMER

Family and domain databases

Gene3Di1.10.443.10, 1 hit
HAMAPiMF_02054 Recomb_XerH, 1 hit
InterProiView protein in InterPro
IPR011010 DNA_brk_join_enz
IPR013762 Integrase-like_cat_sf
IPR002104 Integrase_catalytic
IPR033683 XerH
PfamiView protein in Pfam
PF00589 Phage_integrase, 1 hit
SUPFAMiSSF56349 SSF56349, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ7M937_WOLSU
AccessioniPrimary (citable) accession number: Q7M937
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: February 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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