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Protein

40S ribosomal protein S19b

Gene

RpS19b

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • cytoplasmic translation Source: FlyBase
  • ribosomal small subunit assembly Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DME-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DME-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-DME-72649 Translation initiation complex formation
R-DME-72689 Formation of a pool of free 40S subunits
R-DME-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-DME-72702 Ribosomal scanning and start codon recognition
R-DME-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DME-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DME-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S19b
Gene namesi
Name:RpS19b
Synonyms:RpS19
ORF Names:CG5338
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3R

Organism-specific databases

FlyBaseiFBgn0039129 RpS19b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001538252 – 15540S ribosomal protein S19bAdd BLAST154

Proteomic databases

PaxDbiQ7KS38
PRIDEiQ7KS38

Expressioni

Gene expression databases

BgeeiFBgn0039129
ExpressionAtlasiQ7KS38 baseline and differential
GenevisibleiQ7KS38 DM

Interactioni

Protein-protein interaction databases

BioGridi67766, 9 interactors
IntActiQ7KS38, 6 interactors
STRINGi7227.FBpp0083905

Structurei

3D structure databases

ProteinModelPortaliQ7KS38
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3411 Eukaryota
COG2238 LUCA
GeneTreeiENSGT00390000013102
InParanoidiQ7KS38
KOiK02966
OMAiRMVEKHP
OrthoDBiEOG091G0QM7
PhylomeDBiQ7KS38

Family and domain databases

Gene3Di1.10.10.2700, 1 hit
InterProiView protein in InterPro
IPR001266 Ribosomal_S19e
IPR018277 Ribosomal_S19e_CS
IPR038111 Ribosomal_S19e_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR11710 PTHR11710, 1 hit
PfamiView protein in Pfam
PF01090 Ribosomal_S19e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003854 Ribosomal_S19e, 1 hit
SMARTiView protein in SMART
SM01413 Ribosomal_S19e, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00628 RIBOSOMAL_S19E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7KS38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGVTVKEID QHVLTKNMAA FLKKSGKIFV PEQAVYMKTG KFKETAPTDD
60 70 80 90 100
DWFYTRCASI MRHLYLRSPA GVGAFTKVYS GRKRNGVRPS KHCRSSDGCI
110 120 130 140 150
RKALQALEAA NMVERHPDGG RKLTPQGQRN LDRIANKIVA KQRERSAPVS

MIITT
Length:155
Mass (Da):17,362
Last modified:January 23, 2007 - v3
Checksum:i83275522909BCD0B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014297 Genomic DNA Translation: AAN13960.1
AY119257 mRNA Translation: AAM51117.1
RefSeqiNP_001262891.1, NM_001275962.1
NP_651195.1, NM_142938.2
UniGeneiDm.20517

Genome annotation databases

EnsemblMetazoaiFBtr0084519; FBpp0083905; FBgn0039129
FBtr0332444; FBpp0304717; FBgn0039129
GeneIDi42830
KEGGidme:Dmel_CG5338

Similar proteinsi

Entry informationi

Entry nameiRS19B_DROME
AccessioniPrimary (citable) accession number: Q7KS38
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 25, 2004
Last sequence update: January 23, 2007
Last modified: July 18, 2018
This is version 111 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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