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Entry version 134 (18 Sep 2019)
Sequence version 2 (26 Apr 2005)
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Protein

Indole-3-acetaldehyde oxidase

Gene

AAO1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-alpha may be involved in the biosynthesis of auxin, and in biosynthesis of abscisic acid (ABA) in seeds. In vitro, AO-alpha uses heptaldehyde, protocatechualdehyde, benzaldehyde, indole-3-aldehyde (IAld), indole-3-acetaldehyde (IAAld), cinnamaldehyde and citral as substrates; AO-beta uses IAAld, IAld and naphtaldehyde as substrates.1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Protein has several cofactor binding sites:

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes regulatory mechanisms for enzymes, transporters or microbial transcription factors, and reports the components which regulate (by activation or inhibition) the reaction.<p><a href='/help/activity_regulation' target='_top'>More...</a></p>Activity regulationi

Strongly inhibited by iodoacetate and potassium cyanide (KCN). Weakly inhibited by 2-mercaptoethanol, dithiothreitol (DTT), menadione, estradiol, 4'-(9-acridinylamino)methanesulfon-m-anisidine (mAMSA), allopurinol and tritonX-100. Not affected by p-chloromercuribenzoate.1 Publication

<p>This subsection of the ‘Function’ section describes biophysical and chemical properties, such as maximal absorption, kinetic parameters, pH dependence, redox potentials and temperature dependence.<p><a href='/help/biophysicochemical_properties' target='_top'>More...</a></p>Kineticsi

Kinetic values were obtained with the AO-alpha dimer.
  1. KM=14 µM for heptaldehyde1 Publication
  2. KM=19 µM for protocatechualdehyde1 Publication
  3. KM=0.74 µM for benzaldehyde1 Publication
  4. KM=4.4 µM for indole-3-aldehyde1 Publication
  5. KM=39 µM for indole-3-acetaldehyde1 Publication
  6. KM=20 µM for cinnamaldehyde1 Publication
  7. KM=22 µM for citral1 Publication
  1. Vmax=7.1 nmol/min/mg enzyme with heptaldehyde as substrate1 Publication
  2. Vmax=8.0 nmol/min/mg enzyme with protocatechualdehyde as substrate1 Publication
  3. Vmax=17 nmol/min/mg enzyme with benzaldehyde as substrate1 Publication
  4. Vmax=6.9 nmol/min/mg enzyme with IAld as substrate1 Publication
  5. Vmax=7.3 nmol/min/mg enzyme with IAAld as substrate1 Publication
  6. Vmax=3.8 nmol/min/mg enzyme with cinnamaldehyde as substrate1 Publication
  7. Vmax=38 nmol/min/mg enzyme with citral as substrate1 Publication

pH dependencei

Optimum pH is 8.1 Publication

Temperature dependencei

Optimum temperature is 65 degrees Celsius.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi60Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi65Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi68Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionOxidoreductase
Biological processAbscisic acid biosynthesis, Auxin biosynthesis
Ligand2Fe-2S, FAD, Flavoprotein, Iron, Iron-sulfur, Metal-binding, Molybdenum, NAD

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
ARA:AT5G20960-MONOMER
MetaCyc:AT5G20960-MONOMER

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
1.2.3.1 399

SABIO-RK: Biochemical Reaction Kinetics Database

More...
SABIO-RKi
Q7G193

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Indole-3-acetaldehyde oxidase (EC:1.2.3.7)
Short name:
IAA oxidase
Alternative name(s):
Aldehyde oxidase 1
Short name:
AO-1
Short name:
AtAO-1
Short name:
AtAO1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:AAO1
Synonyms:AO1
Ordered Locus Names:At5g20960
ORF Names:F22D1.130
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G20960

The Arabidopsis Information Resource

More...
TAIRi
locus:2147127 AT5G20960

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cytoplasm

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001661091 – 1368Indole-3-acetaldehyde oxidaseAdd BLAST1368

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q7G193

PRoteomics IDEntifications database

More...
PRIDEi
Q7G193

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Predominantly expressed in roots, seedlings, mature siliques and seeds, and to lower extent in stems and rosettes. In seedlings, mostly expressed in lower part of hypocotyls and roots.5 Publications

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q7G193 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q7G193 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Aldehyde oxidases (AO) are homodimers and heterodimers of AO subunits. AO-alpha is an AAO1 homodimer; AO-beta is an AAO1-AAO2 heterodimer.

1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
17496, 1 interactor

Protein interaction database and analysis system

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IntActi
Q7G193, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT5G20960.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q7G193

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini19 – 1082Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST90
Domaini246 – 427FAD-binding PCMH-typePROSITE-ProRule annotationAdd BLAST182

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the xanthine dehydrogenase family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0430 Eukaryota
COG4630 LUCA
COG4631 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000191197

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q7G193

KEGG Orthology (KO)

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KOi
K11817

Identification of Orthologs from Complete Genome Data

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OMAi
AKATWVE

Database of Orthologous Groups

More...
OrthoDBi
48717at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q7G193

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002888 2Fe-2S-bd
IPR036884 2Fe-2S-bd_dom_sf
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR000674 Ald_Oxase/Xan_DH_a/b
IPR036856 Ald_Oxase/Xan_DH_a/b_sf
IPR016208 Ald_Oxase/xanthine_DH
IPR008274 AldOxase/xan_DH_Mopterin-bd
IPR037165 AldOxase/xan_DH_Mopterin-bd_sf
IPR005107 CO_DH_flav_C
IPR036683 CO_DH_flav_C_dom_sf
IPR016166 FAD-bd_PCMH
IPR036318 FAD-bd_PCMH-like_sf
IPR002346 Mopterin_DH_FAD-bd

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01315 Ald_Xan_dh_C, 1 hit
PF02738 Ald_Xan_dh_C2, 1 hit
PF03450 CO_deh_flav_C, 1 hit
PF00941 FAD_binding_5, 1 hit
PF00111 Fer2, 1 hit
PF01799 Fer2_2, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF000127 Xanthine_DH, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01008 Ald_Xan_dh_C, 1 hit
SM01092 CO_deh_flav_C, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47741 SSF47741, 1 hit
SSF54292 SSF54292, 1 hit
SSF54665 SSF54665, 1 hit
SSF55447 SSF55447, 1 hit
SSF56003 SSF56003, 1 hit
SSF56176 SSF56176, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit
PS51387 FAD_PCMH, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q7G193-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGEKAIDEDK VEAMKSSKTS LVFAINGQRF ELELSSIDPS TTLVDFLRNK
60 70 80 90 100
TPFKSVKLGC GEGGCGACVV LLSKYDPLLE KVDEFTISSC LTLLCSIDGC
110 120 130 140 150
SITTSDGLGN SRVGFHAVHE RIAGFHATQC GFCTPGMSVS MFSALLNADK
160 170 180 190 200
SHPPPRSGFS NLTAVEAEKA VSGNLCRCTG YRPLVDACKS FAADVDIEDL
210 220 230 240 250
GFNAFCKKGE NRDEVLRRLP CYDHTSSHVC TFPEFLKKEI KNDMSLHSRK
260 270 280 290 300
YRWSSPVSVS ELQGLLEVEN GLSVKLVAGN TSTGYYKEEK ERKYERFIDI
310 320 330 340 350
RKIPEFTMVR SDEKGVELGA CVTISKAIEV LREEKNVSVL AKIATHMEKI
360 370 380 390 400
ANRFVRNTGT IGGNIMMAQR KQFPSDLATI LVAAQATVKI MTSSSSQEQF
410 420 430 440 450
TLEEFLQQPP LDAKSLLLSL EIPSWHSAKK NGSSEDSILL FETYRAAPRP
460 470 480 490 500
LGNALAFLNA AFSAEVTEAL DGIVVNDCQL VFGAYGTKHA HRAKKVEEFL
510 520 530 540 550
TGKVISDEVL MEAISLLKDE IVPDKGTSNP GYRSSLAVTF LFEFFGSLTK
560 570 580 590 600
KNAKTTNGWL NGGCKEIGFD QNVESLKPEA MLSSAQQIVE NQEHSPVGKG
610 620 630 640 650
ITKAGACLQA SGEAVYVDDI PAPENCLYGA FIYSTMPLAR IKGIRFKQNR
660 670 680 690 700
VPEGVLGIIT YKDIPKGGQN IGTNGFFTSD LLFAEEVTHC AGQIIAFLVA
710 720 730 740 750
DSQKHADIAA NLVVIDYDTK DLKPPILSLE EAVENFSLFE VPPPLRGYPV
760 770 780 790 800
GDITKGMDEA EHKILGSKIS FGSQYFFYME TQTALAVPDE DNCMVVYSST
810 820 830 840 850
QTPEFVHQTI AGCLGVPENN VRVITRRVGG GFGGKAVKSM PVAAACALAA
860 870 880 890 900
SKMQRPVRTY VNRKTDMITT GGRHPMKVTY SVGFKSNGKI TALDVEVLLD
910 920 930 940 950
AGLTEDISPL MPKGIQGALM KYDWGALSFN VKVCKTNTVS RTALRAPGDV
960 970 980 990 1000
QGSYIGEAII EKVASYLSVD VDEIRKVNLH TYESLRLFHS AKAGEFSEYT
1010 1020 1030 1040 1050
LPLLWDRIDE FSGFNKRRKV VEEFNASNKW RKRGISRVPA VYAVNMRSTP
1060 1070 1080 1090 1100
GRVSVLGDGS IVVEVQGIEI GQGLWTKVKQ MAAYSLGLIQ CGTTSDELLK
1110 1120 1130 1140 1150
KIRVIQSDTL SMVQGSMTAG STTSEASSEA VRICCDGLVE RLLPVKTALV
1160 1170 1180 1190 1200
EQTGGPVTWD SLISQAYQQS INMSVSSKYM PDSTGEYLNY GIAASEVEVN
1210 1220 1230 1240 1250
VLTGETTILR TDIIYDCGKS LNPAVDLGQI EGAFVQGLGF FMLEEFLMNS
1260 1270 1280 1290 1300
DGLVVTDSTW TYKIPTVDTI PRQFNVEILN SGQHKNRVLS SKASGEPPLL
1310 1320 1330 1340 1350
LAASVHCAVR AAVKEARKQI LSWNSNKQGT DMYFELPVPA TMPIVKEFCG
1360
LDVVEKYLEW KIQQRKNV
Length:1,368
Mass (Da):149,554
Last modified:April 26, 2005 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i58C165F4114DC70C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti16S → G in AAC39509 (PubMed:9655945).Curated1
Sequence conflicti150K → R in AAC39509 (PubMed:9655945).Curated1
Sequence conflicti336 – 343NVSVLAKI → MFLCWRKY in AAC39509 (PubMed:9655945).Curated8
Sequence conflicti624E → K in AAC39509 (PubMed:9655945).Curated1
Sequence conflicti708I → V in AAC39509 (PubMed:9655945).Curated1
Sequence conflicti1260W → L in AAC39509 (PubMed:9655945).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF039895 mRNA Translation: AAC39509.1
AB005804 mRNA Translation: BAA28624.1
AF296834 Genomic DNA No translation available.
CP002688 Genomic DNA Translation: AED92912.1
CP002688 Genomic DNA Translation: AED92913.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T51622
T52049

NCBI Reference Sequences

More...
RefSeqi
NP_568407.2, NM_122105.3
NP_851049.1, NM_180718.2

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT5G20960.1; AT5G20960.1; AT5G20960
AT5G20960.2; AT5G20960.2; AT5G20960

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
832221

Gramene; a comparative resource for plants

More...
Gramenei
AT5G20960.1; AT5G20960.1; AT5G20960
AT5G20960.2; AT5G20960.2; AT5G20960

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT5G20960

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039895 mRNA Translation: AAC39509.1
AB005804 mRNA Translation: BAA28624.1
AF296834 Genomic DNA No translation available.
CP002688 Genomic DNA Translation: AED92912.1
CP002688 Genomic DNA Translation: AED92913.1
PIRiT51622
T52049
RefSeqiNP_568407.2, NM_122105.3
NP_851049.1, NM_180718.2

3D structure databases

SMRiQ7G193
ModBaseiSearch...

Protein-protein interaction databases

BioGridi17496, 1 interactor
IntActiQ7G193, 1 interactor
STRINGi3702.AT5G20960.1

Proteomic databases

PaxDbiQ7G193
PRIDEiQ7G193

Genome annotation databases

EnsemblPlantsiAT5G20960.1; AT5G20960.1; AT5G20960
AT5G20960.2; AT5G20960.2; AT5G20960
GeneIDi832221
GrameneiAT5G20960.1; AT5G20960.1; AT5G20960
AT5G20960.2; AT5G20960.2; AT5G20960
KEGGiath:AT5G20960

Organism-specific databases

AraportiAT5G20960
TAIRilocus:2147127 AT5G20960

Phylogenomic databases

eggNOGiKOG0430 Eukaryota
COG4630 LUCA
COG4631 LUCA
HOGENOMiHOG000191197
InParanoidiQ7G193
KOiK11817
OMAiAKATWVE
OrthoDBi48717at2759
PhylomeDBiQ7G193

Enzyme and pathway databases

BioCyciARA:AT5G20960-MONOMER
MetaCyc:AT5G20960-MONOMER
BRENDAi1.2.3.1 399
SABIO-RKiQ7G193

Miscellaneous databases

Protein Ontology

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PROi
PR:Q7G193

Gene expression databases

ExpressionAtlasiQ7G193 baseline and differential
GenevisibleiQ7G193 AT

Family and domain databases

InterProiView protein in InterPro
IPR002888 2Fe-2S-bd
IPR036884 2Fe-2S-bd_dom_sf
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR000674 Ald_Oxase/Xan_DH_a/b
IPR036856 Ald_Oxase/Xan_DH_a/b_sf
IPR016208 Ald_Oxase/xanthine_DH
IPR008274 AldOxase/xan_DH_Mopterin-bd
IPR037165 AldOxase/xan_DH_Mopterin-bd_sf
IPR005107 CO_DH_flav_C
IPR036683 CO_DH_flav_C_dom_sf
IPR016166 FAD-bd_PCMH
IPR036318 FAD-bd_PCMH-like_sf
IPR002346 Mopterin_DH_FAD-bd
PfamiView protein in Pfam
PF01315 Ald_Xan_dh_C, 1 hit
PF02738 Ald_Xan_dh_C2, 1 hit
PF03450 CO_deh_flav_C, 1 hit
PF00941 FAD_binding_5, 1 hit
PF00111 Fer2, 1 hit
PF01799 Fer2_2, 1 hit
PIRSFiPIRSF000127 Xanthine_DH, 1 hit
SMARTiView protein in SMART
SM01008 Ald_Xan_dh_C, 1 hit
SM01092 CO_deh_flav_C, 1 hit
SUPFAMiSSF47741 SSF47741, 1 hit
SSF54292 SSF54292, 1 hit
SSF54665 SSF54665, 1 hit
SSF55447 SSF55447, 1 hit
SSF56003 SSF56003, 1 hit
SSF56176 SSF56176, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit
PS51387 FAD_PCMH, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiALDO1_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q7G193
Secondary accession number(s): O49155, O64417
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: April 26, 2005
Last modified: September 18, 2019
This is version 134 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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