Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Type I secretion system ATP-binding protein PrsD

Gene

prsD

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Mediates secretion of glycanase ExsH.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi366 – 373ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Type I secretion system ATP-binding protein PrsD
Gene namesi
Name:prsD
Ordered Locus Names:RB1292
ORF Names:SM_b21466
Encoded oniPlasmid pSymB (megaplasmid 2)0 Publication
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001976 Componenti: Plasmid pSymB

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei22 – 42HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei59 – 79HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei148 – 168HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004152671 – 582Type I secretion system ATP-binding protein PrsDAdd BLAST582

Proteomic databases

PRIDEiQ7ANN4

Interactioni

Subunit structurei

Part of a type I secretion system composed of PrsD and PrsE.1 Publication

Structurei

3D structure databases

ProteinModelPortaliQ7ANN4
SMRiQ7ANN4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 301ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST280
Domaini332 – 568ABC transporterPROSITE-ProRule annotationAdd BLAST237

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000101575
KOiK12539

Family and domain databases

Gene3Di1.20.1560.10, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR010128 ATPase_T1SS_PrtD
IPR027417 P-loop_NTPase
PANTHERiPTHR24222:SF0 PTHR24222:SF0, 1 hit
PfamiView protein in Pfam
PF00664 ABC_membrane, 1 hit
PF00005 ABC_tran, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
SSF90123 SSF90123, 1 hit
TIGRFAMsiTIGR01842 type_I_sec_PrtD, 1 hit
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 1 hit
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q7ANN4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATSKGRNAD PAAALRDCRA AFIGVGVASA LVNLLYLTGS FFMLEVYDRI
60 70 80 90 100
LPSRSIPSLI ALSLLALLLY AFQGAFELIR GRMLVRIAGA LDESLNGRIY
110 120 130 140 150
RAIVKAPLKL RMQGDGLQAL RDFDQVRSFL SGVGPAALFD LPWLPFYIAI
160 170 180 190 200
CFLFHPVIGL IAIIGGLILT LLTYLTNRGT QAPAKKASEA GGLRNVFAQA
210 220 230 240 250
SQRNAEVVHA MGMSARLTAL WERRNTEFRD ENRRTSDIGN GYGALSKVFR
260 270 280 290 300
MALQSGVLAA GAVLVIRGEA SPGIIIAGSI LTARALAPVE LAIGNWRGLV
310 320 330 340 350
AARQSWQRLK ELLNALPEAD APLQLPDPHE RLTVEGLASG PPAAQRLVVS
360 370 380 390 400
DVNFTVRAGG AVGVIGPSAS GKSSLARAIL GIWPAYRGSV RLDGAALDQW
410 420 430 440 450
DSDALGKHVG YLPQDVELFA GTIAQNICRF AEDATSEAIV AAAKAARVND
460 470 480 490 500
LILRLPNGYD TEIGDGGMTL SAGQRQRVAL ARALYGDPFL VVLDEPNSNL
510 520 530 540 550
DAEGEQALSE AIMSVRSRGG IVIVVAHRPS ALASVDLVLM MNEGRMQAFG
560 570 580
PKEQVLGQVL RPQQVERQNA LKVVAEGQEA KQ
Length:582
Mass (Da):62,120
Last modified:January 25, 2012 - v2
Checksum:i102FEF388C9ED6BA
GO

Sequence cautioni

The sequence CAC49692 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89163 Genomic DNA Translation: AAB64091.1
AL591985 Genomic DNA Translation: CAC49692.2 Different initiation.
PIRiD96003
RefSeqiNP_437832.2, NC_003078.1

Genome annotation databases

EnsemblBacteriaiCAC49692; CAC49692; SM_b21466
GeneIDi1237624
KEGGisme:SM_b21466
PATRICifig|266834.11.peg.6215

Similar proteinsi

Entry informationi

Entry nameiPRSD_RHIME
AccessioniPrimary (citable) accession number: Q7ANN4
Secondary accession number(s): O33678
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 25, 2012
Last sequence update: January 25, 2012
Last modified: May 23, 2018
This is version 64 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health