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Entry version 79 (02 Dec 2020)
Sequence version 1 (05 Jul 2004)
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Protein
Submitted name:

Urea carboxylase homologue

Gene
N/A
Organism
Oleomonas sagaranensis
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

biotinARBA annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolaseARBA annotation, LigaseARBA annotation
LigandATP-bindingPROSITE-ProRule annotationARBA annotation, Nucleotide-binding

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
6.3.4.6, 8118

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Urea carboxylase homologueImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOleomonas sagaranensisImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri89018 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeOleomonas

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 444Biotin carboxylationInterPro annotationAdd BLAST444
Domaini120 – 317ATP-graspInterPro annotationAdd BLAST198
Domaini1091 – 1169Lipoyl-bindingInterPro annotationAdd BLAST79

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.40.100.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011761, ATP-grasp
IPR005481, BC-like_N
IPR011764, Biotin_carboxylation_dom
IPR005482, Biotin_COase_C
IPR000089, Biotin_lipoyl
IPR005479, CbamoylP_synth_lsu-like_ATP-bd
IPR003778, CT_A_B
IPR003833, CT_C_D
IPR029000, Cyclophilin-like_dom_sf
IPR016185, PreATP-grasp_dom_sf
IPR011054, Rudment_hybrid_motif
IPR011053, Single_hybrid_motif

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02785, Biotin_carb_C, 1 hit
PF00289, Biotin_carb_N, 1 hit
PF00364, Biotin_lipoyl, 1 hit
PF02786, CPSase_L_D2, 1 hit
PF02626, CT_A_B, 1 hit
PF02682, CT_C_D, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00796, AHS1, 1 hit
SM00797, AHS2, 1 hit
SM00878, Biotin_carb_C, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50891, SSF50891, 2 hits
SSF51230, SSF51230, 1 hit
SSF51246, SSF51246, 1 hit
SSF52440, SSF52440, 1 hit

TIGRFAMs; a protein family database

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TIGRFAMsi
TIGR00724, urea_amlyse_rel, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50975, ATP_GRASP, 1 hit
PS50979, BC, 1 hit
PS50968, BIOTINYL_LIPOYL, 1 hit
PS00866, CPSASE_1, 1 hit
PS00867, CPSASE_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q75RY4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFKKILIANR GEIAARVIKT ARKMGIATVA VHSEADRFTL PVLAADEAIC
60 70 80 90 100
LGPAPAKESY LRAEAIVQAC IDTGAEAVHP GYGFLSENAG FAEALAAKGI
110 120 130 140 150
RFIGPRPEHL RDFGLKHTAR ALAEAAGVPL LPGTGILLSA EEALAAAHEI
160 170 180 190 200
GYPVMLKSTA GGGGIGMSLC HDASELQARF EAVQRMASSS FGDARVYIER
210 220 230 240 250
FVSTARHVEV QIFGDGKGNV VALGERDCSL QRRNQKVVEE TPAPGLSPEL
260 270 280 290 300
RARLHAAAVA LGKAVAYESA GTVEFIYDVA RGDFSFLEVN TRLQVEHPVT
310 320 330 340 350
ESVFGVDLVE WMIRQAAGEL LLPAQGSLVP RGAAIEVRLY AENPQANFRP
360 370 380 390 400
QTGRLTEVAF PDDIRVDTWV ATGTEVTPFY DPMLAKVIVT GADRPAAIAA
410 420 430 440 450
LSDALAKTKV WGIETNLAYL RAIAASDVFT SGAVSTAALG QFVFTAPTIE
460 470 480 490 500
VIVAGAQTSV QDWPGRLGLW DVGVPPSGPF DDRSFRLANR ILGNAEGAAG
510 520 530 540 550
LECTLSGPTL KFHGDALIAL AGAEMPAALD GVAVPMLTAI PVKAGQTLSL
560 570 580 590 600
GQIKGAGQRT YLAVRGGIDG PKFLGARACF SLGQFGGHAT GVLKAGDTLH
610 620 630 640 650
IAAETAGEPM PADEKPLITR DWVIGVHYGP HGAPDFFQDA DIDDLFAATY
660 670 680 690 700
EVHFNSARTG VRLIGPKPRW ARADGGEAGL HPSNIHDNAY AIGAIDFTGD
710 720 730 740 750
MPIILGPDGP SLGGFVCPAV IARDELWKAG QLKPGDKVRF VPHGMAAPQV
760 770 780 790 800
ITSKDIGTPI LGTIDGGPVP VVYRRAGDDY LLVEYGPMVL DIALRLRIHL
810 820 830 840 850
LAQAVREARL PAIIDLTPGI RSLQIHYDSR VLKTATLVAA LREIEAGLPP
860 870 880 890 900
AEAVKVPSRI VHLPLSWNDP SIQLAARKYQ ELVRPNAPWC PSNIEFIRRI
910 920 930 940 950
NGLGSVDDVQ NIIFDASYLV LGLGDVYLGA PVATPVDPRH RLVTTKYNPA
960 970 980 990 1000
RTWTPENAVG IGGAYMCIYG MEGPGGYQLF GRTVQMWNAW RTTPVFTPGH
1010 1020 1030 1040 1050
PWLLRFFDQI RFFPVSEQEL IEAREAFPHG RYPVRIEETT FDYAQHAAFL
1060 1070 1080 1090 1100
AAERPAIEAA KARQQTAFEV ERQDWKARGL DSFVVEDGPA ASDADVPEGQ
1110 1120 1130 1140 1150
TPVEAQVTGN VWKIIAEEGT NVAAGDIVVI VESMKMEMEI RSPVAGKVTA
1160 1170
LRCQPGRTVQ AGQIVALIEA A
Length:1,171
Mass (Da):125,218
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i19515BD689504E5F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB158433 Genomic DNA Translation: BAD16654.1

Genome annotation databases

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ag:BAD16654

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB158433 Genomic DNA Translation: BAD16654.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

KEGGiag:BAD16654

Enzyme and pathway databases

BRENDAi6.3.4.6, 8118

Family and domain databases

Gene3Di2.40.100.10, 2 hits
InterProiView protein in InterPro
IPR011761, ATP-grasp
IPR005481, BC-like_N
IPR011764, Biotin_carboxylation_dom
IPR005482, Biotin_COase_C
IPR000089, Biotin_lipoyl
IPR005479, CbamoylP_synth_lsu-like_ATP-bd
IPR003778, CT_A_B
IPR003833, CT_C_D
IPR029000, Cyclophilin-like_dom_sf
IPR016185, PreATP-grasp_dom_sf
IPR011054, Rudment_hybrid_motif
IPR011053, Single_hybrid_motif
PfamiView protein in Pfam
PF02785, Biotin_carb_C, 1 hit
PF00289, Biotin_carb_N, 1 hit
PF00364, Biotin_lipoyl, 1 hit
PF02786, CPSase_L_D2, 1 hit
PF02626, CT_A_B, 1 hit
PF02682, CT_C_D, 1 hit
SMARTiView protein in SMART
SM00796, AHS1, 1 hit
SM00797, AHS2, 1 hit
SM00878, Biotin_carb_C, 1 hit
SUPFAMiSSF50891, SSF50891, 2 hits
SSF51230, SSF51230, 1 hit
SSF51246, SSF51246, 1 hit
SSF52440, SSF52440, 1 hit
TIGRFAMsiTIGR00724, urea_amlyse_rel, 1 hit
PROSITEiView protein in PROSITE
PS50975, ATP_GRASP, 1 hit
PS50979, BC, 1 hit
PS50968, BIOTINYL_LIPOYL, 1 hit
PS00866, CPSASE_1, 1 hit
PS00867, CPSASE_2, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ75RY4_9PROT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q75RY4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 2, 2020
This is version 79 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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