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UniProtKB - Q72CD5 (EX7S_DESVH)
Protein
Exodeoxyribonuclease 7 small subunit
Gene
xseB
Organism
Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough)
Status
Functioni
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
UniRule annotationCatalytic activityi
- Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation EC:3.1.11.6
GO - Molecular functioni
- exodeoxyribonuclease VII activity Source: UniProtKB-UniRule
GO - Biological processi
- DNA catabolic process Source: UniProtKB-UniRule
Keywordsi
Molecular function | Exonuclease, Hydrolase, Nuclease |
Enzyme and pathway databases
BioCyci | DVUL882:G1GT1-1383-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)Alternative name(s): Exodeoxyribonuclease VII small subunitUniRule annotation Short name: Exonuclease VII small subunitUniRule annotation |
Gene namesi | Name:xseBUniRule annotation Ordered Locus Names:DVU_1348 |
Organismi | Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) |
Taxonomic identifieri | 882 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › |
Proteomesi |
|
Subcellular locationi
Cytoplasm and Cytosol
- Cytoplasm UniRule annotation
Other locations
- cytoplasm Source: UniProtKB-SubCell
- exodeoxyribonuclease VII complex Source: InterPro
Keywords - Cellular componenti
CytoplasmPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000206944 | 1 – 81 | Exodeoxyribonuclease 7 small subunitAdd BLAST | 81 |
Proteomic databases
PaxDbi | Q72CD5 |
Interactioni
Subunit structurei
Heterooligomer composed of large and small subunits.
UniRule annotationProtein-protein interaction databases
IntActi | Q72CD5, 1 interactor |
STRINGi | 882.DVU_1348 |
Family & Domainsi
Sequence similaritiesi
Belongs to the XseB family.UniRule annotation
Phylogenomic databases
eggNOGi | COG1722, Bacteria |
HOGENOMi | CLU_145918_2_2_7 |
OMAi | HELEIWQ |
PhylomeDBi | Q72CD5 |
Family and domain databases
Gene3Di | 1.10.287.1040, 1 hit |
HAMAPi | MF_00337, Exonuc_7_S, 1 hit |
InterProi | View protein in InterPro IPR003761, Exonuc_VII_S IPR037004, Exonuc_VII_ssu_sf |
PANTHERi | PTHR34137, PTHR34137, 1 hit |
Pfami | View protein in Pfam PF02609, Exonuc_VII_S, 1 hit |
PIRSFi | PIRSF006488, Exonuc_VII_S, 1 hit |
SUPFAMi | SSF116842, SSF116842, 1 hit |
TIGRFAMsi | TIGR01280, xseB, 1 hit |
i Sequence
Sequence statusi: Complete.
Q72CD5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAGRKKAADF EQQLARLQEI VDALEGGDLP LEKSVALYKE GLGLARASRE
60 70 80
QLAKARNEIR LFTEGEVRDF DPEEGDDGDD R
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE017285 Genomic DNA Translation: AAS95826.1 |
RefSeqi | WP_010938643.1, NC_002937.3 YP_010567.1, NC_002937.3 |
Genome annotation databases
EnsemblBacteriai | AAS95826; AAS95826; DVU_1348 |
KEGGi | dvu:DVU_1348 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE017285 Genomic DNA Translation: AAS95826.1 |
RefSeqi | WP_010938643.1, NC_002937.3 YP_010567.1, NC_002937.3 |
3D structure databases
AlphaFoldDBi | Q72CD5 |
SMRi | Q72CD5 |
ModBasei | Search... |
Protein-protein interaction databases
IntActi | Q72CD5, 1 interactor |
STRINGi | 882.DVU_1348 |
Proteomic databases
PaxDbi | Q72CD5 |
Genome annotation databases
EnsemblBacteriai | AAS95826; AAS95826; DVU_1348 |
KEGGi | dvu:DVU_1348 |
Phylogenomic databases
eggNOGi | COG1722, Bacteria |
HOGENOMi | CLU_145918_2_2_7 |
OMAi | HELEIWQ |
PhylomeDBi | Q72CD5 |
Enzyme and pathway databases
BioCyci | DVUL882:G1GT1-1383-MONOMER |
Family and domain databases
Gene3Di | 1.10.287.1040, 1 hit |
HAMAPi | MF_00337, Exonuc_7_S, 1 hit |
InterProi | View protein in InterPro IPR003761, Exonuc_VII_S IPR037004, Exonuc_VII_ssu_sf |
PANTHERi | PTHR34137, PTHR34137, 1 hit |
Pfami | View protein in Pfam PF02609, Exonuc_VII_S, 1 hit |
PIRSFi | PIRSF006488, Exonuc_VII_S, 1 hit |
SUPFAMi | SSF116842, SSF116842, 1 hit |
TIGRFAMsi | TIGR01280, xseB, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | EX7S_DESVH | |
Accessioni | Q72CD5Primary (citable) accession number: Q72CD5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 7, 2005 |
Last sequence update: | July 5, 2004 | |
Last modified: | May 25, 2022 | |
This is version 92 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families