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Protein
Submitted name:

Nesprin-1

Gene

Syne1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActin-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Nesprin-1Imported
Gene namesi
Name:Syne1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 10

Organism-specific databases

MGIiMGI:1927152 Syne1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

GenevisibleiQ6ZWR5 MM

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 134Calponin-homology (CH)InterPro annotationAdd BLAST108
Domaini178 – 283Calponin-homology (CH)InterPro annotationAdd BLAST106

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG0516 Eukaryota
COG5069 LUCA
GeneTreeiENSGT00900000140842

Family and domain databases

CDDicd00014 CH, 2 hits
Gene3Di1.10.418.10, 2 hits
InterProiView protein in InterPro
IPR001589 Actinin_actin-bd_CS
IPR001715 CH-domain
IPR036872 CH_dom_sf
IPR030265 SYNE1
PANTHERiPTHR44867 PTHR44867, 1 hit
PfamiView protein in Pfam
PF00307 CH, 2 hits
SMARTiView protein in SMART
SM00033 CH, 2 hits
SUPFAMiSSF47576 SSF47576, 2 hits
PROSITEiView protein in PROSITE
PS00019 ACTININ_1, 1 hit
PS00020 ACTININ_2, 1 hit
PS50021 CH, 2 hits

Sequencei

Sequence statusi: Fragment.

Q6ZWR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATSRASSRS HRDITNVMQR LQDEQEIVQK RTFTKWINSH LAKRKPPMVV
60 70 80 90 100
DDLFEDMKDG IKLLALLEVL SGQKLPCEQG HRVKRIHAVA NIGTALKFLE
110 120 130 140 150
GRKIKLVNIN ATDIADGRPS IVLGLMWTII LYFQIEELTS NLPQLQSLSS
160 170 180 190 200
SASSVDSMVS TETASPPSKR KVAAKIQGNA KKTLLKWVQH TAGKQMGIEV
210 220 230 240 250
KDFGKSWRTG LAFHSVIHAI QPELVDLEKV KTRSNRENLE DAFTIAETQL
260 270 280 290 300
GIPRLLDPED VDVDKPDEKS IMTYVAQFLT QYPDIHGAGC DGQEDDRDDR
310 320 330 340 350
LILKETKVWI EQFERDFTRA QMTESSLQDK YQAFKHFRVQ YEMKRKQVEH
360 370 380 390 400
IIQPLQRDGK LTLDQALVKQ CWERVSSRLF DWHIQLDKSL PAPLGTIGAW
410 420 430 440 450
LYRAEVALRE EITIQQVHEE TANTIQRKLE QHKDLLQNTD AHKRAFHEIY
460 470 480 490 500
QTRSVNGIPM PPDQLEDMAE RFHFVSSTSE LHLMKMEFLE LKYRLLSLLV
510 520 530 540 550
LAESKLKSWI IKYGRRESVE LLLQSYISFI ENSKFFEQYE VTYQILKQTA
560 570 580 590 600
DIYVKAEGSV EEAENVMKFM SEATAQWRNL SVEVRSVRSM LEEVISNWDR
610
YGDTVASLQA WLEDA
Length:615
Mass (Da):70,947
Last modified:July 19, 2004 - v1
Checksum:i10B1DA9E49B66AB9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei615Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC156392 Genomic DNA No translation available.
AC156393 Genomic DNA No translation available.
AC157020 Genomic DNA No translation available.
AC159748 Genomic DNA No translation available.
AC161829 Genomic DNA No translation available.
AC162381 Genomic DNA No translation available.
AC162385 Genomic DNA No translation available.
AK039486 mRNA Translation: BAC30365.1
RefSeqiNP_700448.2, NM_153399.2
UniGeneiMm.331626

Genome annotation databases

EnsembliENSMUST00000214945; ENSMUSP00000149011; ENSMUSG00000096054
GeneIDi64009
UCSCiuc007egm.1 mouse

Entry informationi

Entry nameiQ6ZWR5_MOUSE
AccessioniPrimary (citable) accession number: Q6ZWR5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: May 23, 2018
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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