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Protein

40S ribosomal protein S9

Gene

Rps9

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

ReactomeiR-MMU-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-MMU-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-MMU-72649 Translation initiation complex formation
R-MMU-72689 Formation of a pool of free 40S subunits
R-MMU-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-MMU-72702 Ribosomal scanning and start codon recognition
R-MMU-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S9
Gene namesi
Name:Rps9
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1924096 Rps9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001326901 – 19440S ribosomal protein S9Add BLAST194

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei66N6-acetyllysineCombined sources1
Cross-linki93Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei116N6-acetyllysineCombined sources1
Cross-linki139Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei153PhosphoserineBy similarity1
Modified residuei155N6-acetyllysineBy similarity1
Modified residuei163PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

EPDiQ6ZWN5
MaxQBiQ6ZWN5
PaxDbiQ6ZWN5
PeptideAtlasiQ6ZWN5
PRIDEiQ6ZWN5

PTM databases

iPTMnetiQ6ZWN5
PhosphoSitePlusiQ6ZWN5
SwissPalmiQ6ZWN5

Expressioni

Gene expression databases

BgeeiENSMUSG00000006333
CleanExiMM_RPS9
ExpressionAtlasiQ6ZWN5 baseline and differential
GenevisibleiQ6ZWN5 MM

Interactioni

Subunit structurei

Identified in a IGF2BP1-dependent mRNP granule complex containing untranslated mRNAs.By similarity

Protein-protein interaction databases

BioGridi218346, 3 interactors
IntActiQ6ZWN5, 1 interactor
STRINGi10090.ENSMUSP00000006496

Structurei

3D structure databases

ProteinModelPortaliQ6ZWN5
SMRiQ6ZWN5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini108 – 182S4 RNA-bindingPROSITE-ProRule annotationAdd BLAST75

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3301 Eukaryota
COG0522 LUCA
GeneTreeiENSGT00550000074829
HOGENOMiHOG000194525
HOVERGENiHBG001135
InParanoidiQ6ZWN5
KOiK02997
OMAiTHGHIAI
OrthoDBiEOG091G0S57
PhylomeDBiQ6ZWN5
TreeFamiTF300795

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR022801 Ribosomal_S4/S9
IPR005710 Ribosomal_S4/S9_euk/arc
IPR001912 Ribosomal_S4/S9_N
IPR018079 Ribosomal_S4_CS
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PANTHERiPTHR11831 PTHR11831, 1 hit
PfamiView protein in Pfam
PF00163 Ribosomal_S4, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM01390 Ribosomal_S4, 1 hit
SM00363 S4, 1 hit
TIGRFAMsiTIGR01018 uS4_arch, 1 hit
PROSITEiView protein in PROSITE
PS00632 RIBOSOMAL_S4, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

Q6ZWN5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVARSWVCR KTYVTPRRPF EKSRLDQELK LIGEYGLRNK REVWRVKFTL
60 70 80 90 100
AKIRKAAREL LTLDEKDPRR LFEGNALLRR LVRIGVLDEG KMKLDYILGL
110 120 130 140 150
KIEDFLERRL QTQVFKLGLA KSIHHARVLI RQRHIRVRKQ VVNIPSFIVR
160 170 180 190
LDSQKHIDFS LRSPYGGGRP GRVKRKNAKK GQGGAGAGDD EEED
Length:194
Mass (Da):22,591
Last modified:January 23, 2007 - v3
Checksum:iE9CE3CBD59524F81
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti156H → P in AAH31746 (PubMed:15489334).Curated1
Sequence conflicti163S → F in AAH31746 (PubMed:15489334).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK050591 mRNA Translation: BAC34330.1
AK081889 mRNA Translation: BAC38361.1
AK150800 mRNA Translation: BAE29863.1
AK150988 mRNA Translation: BAE30013.1
AK151029 mRNA Translation: BAE30046.1
AK151621 mRNA Translation: BAE30558.1
BC031746 mRNA Translation: AAH31746.1
CCDSiCCDS20726.1
RefSeqiNP_084043.1, NM_029767.2
UniGeneiMm.13944

Genome annotation databases

EnsembliENSMUST00000006496; ENSMUSP00000006496; ENSMUSG00000006333
ENSMUST00000108625; ENSMUSP00000104265; ENSMUSG00000006333
GeneIDi76846
KEGGimmu:76846
UCSCiuc009ewa.1 mouse

Similar proteinsi

Entry informationi

Entry nameiRS9_MOUSE
AccessioniPrimary (citable) accession number: Q6ZWN5
Secondary accession number(s): Q3UBF1, Q8K2D1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 27, 2004
Last sequence update: January 23, 2007
Last modified: June 20, 2018
This is version 126 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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