Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 118 (11 Dec 2019)
Sequence version 3 (18 May 2010)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein

Uncharacterized protein C15orf39

Gene

C15orf39

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein C15orf39
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:FP6578
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 15

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
HostDB:ENSG00000167173.18

Human Gene Nomenclature Database

More...
HGNCi
HGNC:24497 C15orf39

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q6ZRI6

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Open Targets

More...
OpenTargetsi
ENSG00000167173

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA142672275

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q6ZRI6 Tdark

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
C15orf39

Domain mapping of disease mutations (DMDM)

More...
DMDMi
296439396

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002443431 – 1047Uncharacterized protein C15orf39Add BLAST1047

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei17N6-acetyllysineCombined sources1
Modified residuei208PhosphoserineCombined sources1
Modified residuei299PhosphoserineCombined sources1
Modified residuei391PhosphoserineCombined sources1
Modified residuei397PhosphothreonineCombined sources1
Modified residuei455PhosphoserineCombined sources1
Modified residuei496PhosphoserineBy similarity1
Modified residuei497PhosphoserineBy similarity1
Modified residuei936PhosphoserineBy similarity1
Modified residuei956PhosphoserineCombined sources1
Modified residuei988PhosphoserineBy similarity1
Modified residuei996PhosphoserineBy similarity1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q6ZRI6

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q6ZRI6

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q6ZRI6

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q6ZRI6

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6ZRI6

PeptideAtlas

More...
PeptideAtlasi
Q6ZRI6

PRoteomics IDEntifications database

More...
PRIDEi
Q6ZRI6

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
68134 [Q6ZRI6-1]
68135 [Q6ZRI6-2]
68136 [Q6ZRI6-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6ZRI6

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6ZRI6

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000167173 Expressed in 167 organ(s), highest expression level in testis

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q6ZRI6 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q6ZRI6 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA039961
HPA041907

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
121235, 33 interactors

Protein interaction database and analysis system

More...
IntActi
Q6ZRI6, 20 interactors

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000353854

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q6ZRI6 protein

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IGI4 Eukaryota
ENOG410YQ9P LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000002672

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6ZRI6

Identification of Orthologs from Complete Genome Data

More...
OMAi
TQQCPFP

Database of Orthologous Groups

More...
OrthoDBi
367030at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6ZRI6

TreeFam database of animal gene trees

More...
TreeFami
TF338672

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR037656 DUF5525

The PANTHER Classification System

More...
PANTHERi
PTHR28422 PTHR28422, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF17663 DUF5525, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q6ZRI6-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAEKRPLRTL GPVMYGKLPR LETDSGLEHS LPHSVGNQDP CTYKGSYFSC
60 70 80 90 100
PMAGTPKAES EQLASWTPYP PLYSTGMAGP PLQADNLLTN CLFYRSPAEG
110 120 130 140 150
PEKMQDSSPV ELLPFSPQAH SYPGPPLAAP KPVYRNPLCY GLSTCLGEGA
160 170 180 190 200
VKRPLDVDWT LATGPLLPSA DPPCSLAPAP SKGQTLDGTF LRGVPAEGSS
210 220 230 240 250
KDSSGSFSPC QPFLEKYQTI HSTGFLASRY TGPYPRNSKQ AMSEGPSSPW
260 270 280 290 300
TQLAQPLGPP CQDTGPTHYP PPHHPPPHPP QALPCPPACR HPEKQGSYSP
310 320 330 340 350
ALPLQPLGGH KGTGYQAGGL GSPYLRQQAA QAPYIPPLGL DAYPYPSAPL
360 370 380 390 400
PAPSPGLKLE PPLTPRCPLD FAPQTLSFPY ARDDLSLYGA SPGLGGTPPS
410 420 430 440 450
QNNVRAVPQP GAFQRACQPL PASQPCSEPV RPAQEAEEKT WLPSCRKEKL
460 470 480 490 500
QPRLSEHSGP PIVIRDSPVP CTPPALPPCA RECQSLPQKE GARPPSSPPM
510 520 530 540 550
PVIDNVFSLA PYRDYLDVPA PEATTEPDSA TAEPDSAPAT SEGQDKGCRG
560 570 580 590 600
TLPAQEGPSG SKPLRGSLKE EVALDLSVRK PTAEASPVKA SRSVEHAKPT
610 620 630 640 650
AAMDVPDVGN MVSDLPGLKK IDTEAPGLPG VPVTTDAMPR TNFHSSVAFM
660 670 680 690 700
FRKFKILRPA PLPAAVVPST PTSAPAPTQP APTPTSGPIG LRILAQQPLS
710 720 730 740 750
VTCFSLALPS PPAVAVASPA PAPAPSPAPA RAQAPASARD PAPAPAPVAG
760 770 780 790 800
PAPASTSAPG DSLEQHFTGL HASLCDAISG SVAHSPPEKL REWLETAGPW
810 820 830 840 850
GQAAWQDCQG VQGLLAKLLS QLQRFDRTHR CPFPHVVRAG AIFVPIHLVK
860 870 880 890 900
ERLFPRLPPA SVDHVLQEHR VELRPTTLSE ERALRELALP GCTSRMLKLL
910 920 930 940 950
ALRQLPDIYP DLLGLQWRDC VRRQLGDFDT EAGAVSSSEP TVARGEPESL
960 970 980 990 1000
ALAQKSPAPK VRKPGRKPPT PGPEKAEAAA GEESCGASPT PATSASPPGP
1010 1020 1030 1040
TLKARFRSLL ETAWLNGLAL PTWGHKSSRP DQPSPCPQLL DSQSHHL
Length:1,047
Mass (Da):110,673
Last modified:May 18, 2010 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4D31AB94689FED5F
GO
Isoform 2 (identifier: Q6ZRI6-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     927-938: DFDTEAGAVSSS → EHGAAPVATGAV
     939-1047: Missing.

Show »
Length:938
Mass (Da):99,213
Checksum:i224E1B67D192F3ED
GO
Isoform 3 (identifier: Q6ZRI6-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-910: Missing.
     911-925: DLLGLQWRDCVRRQL → MGQPQWPPELCEQVT

Show »
Length:137
Mass (Da):14,321
Checksum:iFB2A52B334FF8320
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H3BMJ2H3BMJ2_HUMAN
Uncharacterized protein C15orf39
C15orf39
807Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H3BT66H3BT66_HUMAN
Uncharacterized protein C15orf39
C15orf39
29Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H3BN41H3BN41_HUMAN
Uncharacterized protein C15orf39
C15orf39
21Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H3BRS2H3BRS2_HUMAN
Uncharacterized protein C15orf39
C15orf39
27Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAQ06680 differs from that shown. Reason: Frameshift.Curated
The sequence CAB55985 differs from that shown. Reason: Erroneous initiation. Extended N-terminus.Curated
The sequence CAD39045 differs from that shown. Reason: Frameshift.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti592R → H in CAD39045 (PubMed:17974005).Curated1
Sequence conflicti913L → P in BAC87324 (PubMed:15498874).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_026891119A → P1 PublicationCorresponds to variant dbSNP:rs1873379Ensembl.1
Natural variantiVAR_026892491G → DCombined sources3 PublicationsCorresponds to variant dbSNP:rs11072532Ensembl.1
Natural variantiVAR_026893536S → A1 PublicationCorresponds to variant dbSNP:rs28509789Ensembl.1
Natural variantiVAR_026894945G → DCombined sources5 PublicationsCorresponds to variant dbSNP:rs3743211Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0195381 – 910Missing in isoform 3. 3 PublicationsAdd BLAST910
Alternative sequenceiVSP_019539911 – 925DLLGL…VRRQL → MGQPQWPPELCEQVT in isoform 3. 3 PublicationsAdd BLAST15
Alternative sequenceiVSP_019540927 – 938DFDTE…AVSSS → EHGAAPVATGAV in isoform 2. 1 PublicationAdd BLAST12
Alternative sequenceiVSP_019541939 – 1047Missing in isoform 2. 1 PublicationAdd BLAST109

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL117540 mRNA Translation: CAB55985.3 Different initiation.
AK125111 mRNA Translation: BAG54145.1
AK125604 mRNA Translation: BAC86215.1
AK128205 mRNA Translation: BAC87324.1
AF495726 mRNA Translation: AAQ06680.1 Frameshift.
CR533482 mRNA Translation: CAG38513.1
AC113208 Genomic DNA No translation available.
BC001762 mRNA Translation: AAH01762.1
BC011379 mRNA Translation: AAH11379.2
BC011905 mRNA Translation: AAH11905.1
BC051235 mRNA Translation: AAH51235.1
BC110367 mRNA Translation: AAI10368.1
AL834382 mRNA Translation: CAD39045.1 Frameshift.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS10276.1 [Q6ZRI6-1]

Protein sequence database of the Protein Information Resource

More...
PIRi
T17295

NCBI Reference Sequences

More...
RefSeqi
NP_056307.2, NM_015492.4 [Q6ZRI6-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000360639; ENSP00000353854; ENSG00000167173 [Q6ZRI6-1]
ENST00000394987; ENSP00000378438; ENSG00000167173 [Q6ZRI6-1]
ENST00000567617; ENSP00000458025; ENSG00000167173 [Q6ZRI6-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
56905

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:56905

UCSC genome browser

More...
UCSCi
uc002azp.4 human [Q6ZRI6-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL117540 mRNA Translation: CAB55985.3 Different initiation.
AK125111 mRNA Translation: BAG54145.1
AK125604 mRNA Translation: BAC86215.1
AK128205 mRNA Translation: BAC87324.1
AF495726 mRNA Translation: AAQ06680.1 Frameshift.
CR533482 mRNA Translation: CAG38513.1
AC113208 Genomic DNA No translation available.
BC001762 mRNA Translation: AAH01762.1
BC011379 mRNA Translation: AAH11379.2
BC011905 mRNA Translation: AAH11905.1
BC051235 mRNA Translation: AAH51235.1
BC110367 mRNA Translation: AAI10368.1
AL834382 mRNA Translation: CAD39045.1 Frameshift.
CCDSiCCDS10276.1 [Q6ZRI6-1]
PIRiT17295
RefSeqiNP_056307.2, NM_015492.4 [Q6ZRI6-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi121235, 33 interactors
IntActiQ6ZRI6, 20 interactors
STRINGi9606.ENSP00000353854

PTM databases

iPTMnetiQ6ZRI6
PhosphoSitePlusiQ6ZRI6

Polymorphism and mutation databases

BioMutaiC15orf39
DMDMi296439396

Proteomic databases

EPDiQ6ZRI6
jPOSTiQ6ZRI6
MassIVEiQ6ZRI6
MaxQBiQ6ZRI6
PaxDbiQ6ZRI6
PeptideAtlasiQ6ZRI6
PRIDEiQ6ZRI6
ProteomicsDBi68134 [Q6ZRI6-1]
68135 [Q6ZRI6-2]
68136 [Q6ZRI6-3]

Genome annotation databases

EnsembliENST00000360639; ENSP00000353854; ENSG00000167173 [Q6ZRI6-1]
ENST00000394987; ENSP00000378438; ENSG00000167173 [Q6ZRI6-1]
ENST00000567617; ENSP00000458025; ENSG00000167173 [Q6ZRI6-2]
GeneIDi56905
KEGGihsa:56905
UCSCiuc002azp.4 human [Q6ZRI6-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
56905
EuPathDBiHostDB:ENSG00000167173.18

GeneCards: human genes, protein and diseases

More...
GeneCardsi
C15orf39
HGNCiHGNC:24497 C15orf39
HPAiHPA039961
HPA041907
neXtProtiNX_Q6ZRI6
OpenTargetsiENSG00000167173
PharmGKBiPA142672275

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

eggNOGiENOG410IGI4 Eukaryota
ENOG410YQ9P LUCA
GeneTreeiENSGT00390000002672
InParanoidiQ6ZRI6
OMAiTQQCPFP
OrthoDBi367030at2759
PhylomeDBiQ6ZRI6
TreeFamiTF338672

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
C15orf39 human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
56905
PharosiQ6ZRI6 Tdark

Protein Ontology

More...
PROi
PR:Q6ZRI6
RNActiQ6ZRI6 protein

Gene expression databases

BgeeiENSG00000167173 Expressed in 167 organ(s), highest expression level in testis
ExpressionAtlasiQ6ZRI6 baseline and differential
GenevisibleiQ6ZRI6 HS

Family and domain databases

InterProiView protein in InterPro
IPR037656 DUF5525
PANTHERiPTHR28422 PTHR28422, 1 hit
PfamiView protein in Pfam
PF17663 DUF5525, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCO039_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6ZRI6
Secondary accession number(s): B3KWI3
, C9J888, Q71JB1, Q7L3S0, Q8N3F2, Q96FB6, Q9NTU5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: May 18, 2010
Last modified: December 11, 2019
This is version 118 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  2. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  3. Human chromosome 15
    Human chromosome 15: entries, gene names and cross-references to MIM
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again