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Entry version 121 (02 Jun 2021)
Sequence version 2 (02 May 2006)
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Protein

Zinc finger CCCH domain-containing protein 4

Gene

Zc3h4

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri389 – 416C3H1-type 1PROSITE-ProRule annotationAdd BLAST28
Zinc fingeri418 – 445C3H1-type 2PROSITE-ProRule annotationAdd BLAST28
Zinc fingeri446 – 469C3H1-type 3PROSITE-ProRule annotationAdd BLAST24

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Zinc finger CCCH domain-containing protein 4
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Zc3h4
Synonyms:Kiaa1064
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2682314, Zc3h4

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002340691 – 1304Zinc finger CCCH domain-containing protein 4Add BLAST1304

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei92PhosphoserineBy similarity1
Modified residuei94PhosphoserineBy similarity1
Modified residuei155PhosphotyrosineBy similarity1
Modified residuei599Asymmetric dimethylarginineCombined sources1
Modified residuei816PhosphoserineCombined sources1
Modified residuei817PhosphoserineCombined sources1
Modified residuei913PhosphoserineBy similarity1
Modified residuei916PhosphoserineBy similarity1
Modified residuei917PhosphoserineCombined sources1
Modified residuei1104PhosphoserineCombined sources1
Modified residuei1109PhosphoserineCombined sources1
Modified residuei1111PhosphoserineBy similarity1
Modified residuei1115PhosphoserineCombined sources1
Modified residuei1119PhosphothreonineCombined sources1
Modified residuei1270PhosphoserineCombined sources1
Modified residuei1276PhosphoserineCombined sources1

Keywords - PTMi

Methylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q6ZPZ3

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q6ZPZ3

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6ZPZ3

PeptideAtlas

More...
PeptideAtlasi
Q6ZPZ3

PRoteomics IDEntifications database

More...
PRIDEi
Q6ZPZ3

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
302042 [Q6ZPZ3-1]
302043 [Q6ZPZ3-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6ZPZ3

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6ZPZ3

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q6ZPZ3

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
236971, 1 interactor

Database of interacting proteins

More...
DIPi
DIP-61658N

Protein interaction database and analysis system

More...
IntActi
Q6ZPZ3, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000096386

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q6ZPZ3, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q6ZPZ3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 387DisorderedSequence analysisAdd BLAST387
Regioni485 – 567DisorderedSequence analysisAdd BLAST83
Regioni601 – 691DisorderedSequence analysisAdd BLAST91
Regioni719 – 970DisorderedSequence analysisAdd BLAST252
Regioni994 – 1304DisorderedSequence analysisAdd BLAST311

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili94 – 128Sequence analysisAdd BLAST35
Coiled coili778 – 809Sequence analysisAdd BLAST32

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 36Pro residuesSequence analysisAdd BLAST36
Compositional biasi40 – 54Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi55 – 73Acidic residuesSequence analysisAdd BLAST19
Compositional biasi74 – 100Basic and acidic residuesSequence analysisAdd BLAST27
Compositional biasi101 – 128Basic residuesSequence analysisAdd BLAST28
Compositional biasi143 – 159Basic and acidic residuesSequence analysisAdd BLAST17
Compositional biasi163 – 178Polar residuesSequence analysisAdd BLAST16
Compositional biasi198 – 216Acidic residuesSequence analysisAdd BLAST19
Compositional biasi217 – 239Basic and acidic residuesSequence analysisAdd BLAST23
Compositional biasi278 – 302Acidic residuesSequence analysisAdd BLAST25
Compositional biasi303 – 324Basic and acidic residuesSequence analysisAdd BLAST22
Compositional biasi325 – 342Basic residuesSequence analysisAdd BLAST18
Compositional biasi370 – 387Basic and acidic residuesSequence analysisAdd BLAST18
Compositional biasi485 – 501Basic and acidic residuesSequence analysisAdd BLAST17
Compositional biasi504 – 560Pro residuesSequence analysisAdd BLAST57
Compositional biasi605 – 626Pro residuesSequence analysisAdd BLAST22
Compositional biasi630 – 658Basic and acidic residuesSequence analysisAdd BLAST29
Compositional biasi663 – 691Pro residuesSequence analysisAdd BLAST29
Compositional biasi740 – 757Pro residuesSequence analysisAdd BLAST18
Compositional biasi784 – 811Basic and acidic residuesSequence analysisAdd BLAST28
Compositional biasi817 – 849Polar residuesSequence analysisAdd BLAST33
Compositional biasi910 – 924Polar residuesSequence analysisAdd BLAST15
Compositional biasi929 – 943Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi1032 – 1047Polar residuesSequence analysisAdd BLAST16
Compositional biasi1133 – 1149Polar residuesSequence analysisAdd BLAST17
Compositional biasi1161 – 1175Polar residuesSequence analysisAdd BLAST15
Compositional biasi1200 – 1220Polar residuesSequence analysisAdd BLAST21

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri389 – 416C3H1-type 1PROSITE-ProRule annotationAdd BLAST28
Zinc fingeri418 – 445C3H1-type 2PROSITE-ProRule annotationAdd BLAST28
Zinc fingeri446 – 469C3H1-type 3PROSITE-ProRule annotationAdd BLAST24

Keywords - Domaini

Coiled coil, Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1040, Eukaryota

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6ZPZ3

Database of Orthologous Groups

More...
OrthoDBi
145192at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6ZPZ3

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR041367, Znf-CCCH_4
IPR000571, Znf_CCCH
IPR036855, Znf_CCCH_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00642, zf-CCCH, 1 hit
PF18044, zf-CCCH_4, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00356, ZnF_C3H1, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF90229, SSF90229, 3 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50103, ZF_C3H1, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q6ZPZ3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MEAVPGTPPP PPSESPPPPS PPPPSTPSPP PCSPDGRAAT PHLLHHRLPL
60 70 80 90 100
PDDREDGELE EGELEDDGAE EVQDPPGGQE RSRKEKGEKH HSDSEEEKSH
110 120 130 140 150
RRLKRKRKKE REKEKRRSKK RRKSKHKRHA SSSDDFSDFS DDSDFSPSEK
160 170 180 190 200
SHRKYRDYSP PYAPSHQQYS SSHNAPLPKK SYSKMDSKGY SMYEDYENEQ
210 220 230 240 250
YGEYEGDEEE DMGKEDYDDF TKELNQYRRA KEGSSRGRGS RGRGRGYRGR
260 270 280 290 300
GSRGGSRGRG MGRGSRGRGR GSMGEHPEDE EDLYEEEIEY GESEEPMGDD
310 320 330 340 350
DYDDYSKELN QYRRSKDSRG RGLSRGRGRG SRGGRGKGMG RGRGRGGRGG
360 370 380 390 400
MSKGGMNDDE DFYDDDMGDG GGGSYRRSDH DKPHQQSDKK GKVICKYFVE
410 420 430 440 450
GRCTWGDHCN FSHDIELPKK RELCKFYITG FCARAENCPY MHGDFPCKLY
460 470 480 490 500
HTTGNCINGD DCMFSHDPLT EETRELLDKM LADDAEAGAE DEKEVEELKK
510 520 530 540 550
QGINPLPKPP PGVGLLPTPP RPPGPPAPTS PNGRPMQGGP PPPPPPPPPP
560 570 580 590 600
PGPPQMSLPT HEPLSPQQLQ QDMYNKKIPS LFEIVVRPTG QLAEKLGVRF
610 620 630 640 650
PGPGGPSGPM GPGPNMGPPG PMGGPMHPDM HPDMHPDMHP DMHPDMHPDM
660 670 680 690 700
HPDMHPDMHP DMPMGPGMNP GPPMGPGGPP MMPYGPGDSP HSGMMPPIPP
710 720 730 740 750
AQNFYENFYP QQEGMEMEPG LVGDAEDYGH YEELPGQPGE PLFPEHPLEP
760 770 780 790 800
DSFPEGGPPG RPKAGAGVPD FLPSAQRALY LRIQQKQQEE ERARRLAESS
810 820 830 840 850
KQDRENEEGD TGNWYSSDED EGGSSVTSIL KTLRQQTSSR PQASVGEPSS
860 870 880 890 900
SGLGDPRLQK GHPTGSRLSD PRLSRDPRLS RHAETSGGSG PGDSGPSDPR
910 920 930 940 950
LARALPTSKA EGSLHSSPAG PSSSKGQPPA EEEEGERALR EKAVNIPLDP
960 970 980 990 1000
LPGHPLRDPR SQLQQFSHIK KDVTLSKPSF ARTVLWNPED LIPLPIPKQD
1010 1020 1030 1040 1050
VPPVPAALQS LPALDPRLHR STPPGPPNTR QRPGSTDPST SGSNLPDFEL
1060 1070 1080 1090 1100
LSRILKTVNV NTPGQSEKPS DPRVRKTPTD PRLQKPADPV AASRAAKPCP
1110 1120 1130 1140 1150
TEASPPAASP SGDSSPPATA PYDPRVLAAG GLGQGSSSGQ SSVLSGISLY
1160 1170 1180 1190 1200
DPRTPNAGGK TAEPASDTSA QPKGPEGNGK GSASKAKEPP FVRKSALEQP
1210 1220 1230 1240 1250
ETGKASTDGA TATDRYNSYN RPRPKATAAP TAASSTPPPE GATPQPGVHN
1260 1270 1280 1290 1300
LPVPTLFGTV KPAPKTGTGS PFAGNSPARE GEQDAGSLKD VFKGFDPTAS

PFCQ
Length:1,304
Mass (Da):140,967
Last modified:May 2, 2006 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF2D02AAC15148C8B
GO
Isoform 2 (identifier: Q6ZPZ3-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     726-808: Missing.

Show »
Length:1,221
Mass (Da):131,604
Checksum:i63DCFF84DD5DB81B
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9Q8K8E9Q8K8_MOUSE
Zinc finger CCCH domain-containing ...
Zc3h4
1,255Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1B0GRU3A0A1B0GRU3_MOUSE
Zinc finger CCCH domain-containing ...
Zc3h4
1,180Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_018209726 – 808Missing in isoform 2. 1 PublicationAdd BLAST83

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC148972 Genomic DNA No translation available.
AK129275 mRNA Translation: BAC98085.1

NCBI Reference Sequences

More...
RefSeqi
NP_941033.2, NM_198631.2
XP_006540165.1, XM_006540102.3 [Q6ZPZ3-1]
XP_006540169.1, XM_006540106.3 [Q6ZPZ3-2]
XP_006540170.1, XM_006540107.3 [Q6ZPZ3-1]
XP_006540171.1, XM_006540108.3 [Q6ZPZ3-1]
XP_017177799.1, XM_017322310.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
330474

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:330474

UCSC genome browser

More...
UCSCi
uc009fht.1, mouse [Q6ZPZ3-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC148972 Genomic DNA No translation available.
AK129275 mRNA Translation: BAC98085.1
RefSeqiNP_941033.2, NM_198631.2
XP_006540165.1, XM_006540102.3 [Q6ZPZ3-1]
XP_006540169.1, XM_006540106.3 [Q6ZPZ3-2]
XP_006540170.1, XM_006540107.3 [Q6ZPZ3-1]
XP_006540171.1, XM_006540108.3 [Q6ZPZ3-1]
XP_017177799.1, XM_017322310.1

3D structure databases

SMRiQ6ZPZ3
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi236971, 1 interactor
DIPiDIP-61658N
IntActiQ6ZPZ3, 1 interactor
STRINGi10090.ENSMUSP00000096386

PTM databases

iPTMnetiQ6ZPZ3
PhosphoSitePlusiQ6ZPZ3
SwissPalmiQ6ZPZ3

Proteomic databases

EPDiQ6ZPZ3
jPOSTiQ6ZPZ3
PaxDbiQ6ZPZ3
PeptideAtlasiQ6ZPZ3
PRIDEiQ6ZPZ3
ProteomicsDBi302042 [Q6ZPZ3-1]
302043 [Q6ZPZ3-2]

Genome annotation databases

GeneIDi330474
KEGGimmu:330474
UCSCiuc009fht.1, mouse [Q6ZPZ3-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
23211
MGIiMGI:2682314, Zc3h4

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiKOG1040, Eukaryota
InParanoidiQ6ZPZ3
OrthoDBi145192at2759
PhylomeDBiQ6ZPZ3

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
330474, 13 hits in 52 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Zc3h4, mouse

Protein Ontology

More...
PROi
PR:Q6ZPZ3
RNActiQ6ZPZ3, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Family and domain databases

InterProiView protein in InterPro
IPR041367, Znf-CCCH_4
IPR000571, Znf_CCCH
IPR036855, Znf_CCCH_sf
PfamiView protein in Pfam
PF00642, zf-CCCH, 1 hit
PF18044, zf-CCCH_4, 1 hit
SMARTiView protein in SMART
SM00356, ZnF_C3H1, 3 hits
SUPFAMiSSF90229, SSF90229, 3 hits
PROSITEiView protein in PROSITE
PS50103, ZF_C3H1, 3 hits

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiZC3H4_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6ZPZ3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 2, 2006
Last sequence update: May 2, 2006
Last modified: June 2, 2021
This is version 121 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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