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Protein
Submitted name:

MKIAA1869 protein

Gene

Sema6c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MKIAA1869 proteinImported
Gene namesi
Name:Sema6cImported
Synonyms:mKIAA1869Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1338032 Sema6c

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei449 – 473HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ6ZPG8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 360SemaInterPro annotationAdd BLAST360

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3611 Eukaryota
ENOG410XQZC LUCA
HOVERGENiHBG072910

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR001627 Semap_dom
IPR036352 Semap_dom_sf
IPR027231 Semaphorin
IPR015514 Semaphorin_6C
IPR015943 WD40/YVTN_repeat-like_dom_sf
PANTHERiPTHR11036 PTHR11036, 1 hit
PTHR11036:SF11 PTHR11036:SF11, 1 hit
PfamiView protein in Pfam
PF01403 Sema, 1 hit
SMARTiView protein in SMART
SM00630 Sema, 1 hit
SUPFAMiSSF101912 SSF101912, 1 hit
PROSITEiView protein in PROSITE
PS51004 SEMA, 1 hit

Sequencei

Sequence statusi: Fragment.

Q6ZPG8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
QQEGEELSGQ ARCPFDATQS TVAIFAEGSL YSATAADFQA SDAVVYRSLG
60 70 80 90 100
PQPPLRSAKY DSKWLREPHF VYALEHGEHV YFFFREVSVE DARLGRVQFS
110 120 130 140 150
RVARVCKRDM GGSPRALDRH WTSFLKLRLN CSVPGDSTFY FDVLQSLTGP
160 170 180 190 200
VNLHGRSALF GVFTTQTNSI PGSAVCAFYL DDIERGFEGK FKEQRSLDGA
210 220 230 240 250
WTPVSEDKVP SPRPGSCAGV GAAASFSSSQ DLPDDVLLFI KAHPLLDPAV
260 270 280 290 300
PPATHQPLLT LTSRALLTQV AVDGMAGPHR NTTVLFLGSN DGTVLKVLPP
310 320 330 340 350
GGQSLGSEPI VLEEIDAYSH ARCSGKRSPR AARRIIGLEL DTEGHRLFVA
360 370 380 390 400
FPGCIVYLSL SRCARHGACQ RSCLASLDPY CGWHRSRGCM SIRGPGGTDV
410 420 430 440 450
DLTGNQESTE HGDCQDGATG SQSGPGDSAY GVRRDLSPAS ASRSIPIPLL
460 470 480 490 500
LACVAAAFAL GASVSGLLVS CACRRANRRR SKDIETPGLP RPLSLRSLAR
510 520 530 540 550
LHGGGPEPPP PPKDGDAAQT PQLYTTFLPP PDGGSPPELA CLPTPETTPE
560 570 580 590 600
LPVKHLRASG GPWEWNQNGN NASEGPGRPP RGCSGAGGPA PRVLVRPPPP
610 620 630 640 650
GCPGQAVEVT TLEELLRYLH GPQPPRKGSE PLASAPFTSR PPASEPGASL
660 670 680 690 700
FVDSSPMPRD GVPPLRLDVP PEGKRAAPSG RPALSAPAPR LGVGGSRRLP
710 720 730 740 750
FPTHRAPPGL LTRVPSGGPA RYSGGPGRHL LYLGRPEGHR GRSLKRVDVK
760 770
SPLSPKPPLA SPPQPAPHGG HFNF
Length:774
Mass (Da):82,108
Last modified:July 5, 2004 - v1
Checksum:iA930A85A9EEFC00A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129459 mRNA Translation: BAC98269.1
UniGeneiMm.23662

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129459 mRNA Translation: BAC98269.1
UniGeneiMm.23662

3D structure databases

ProteinModelPortaliQ6ZPG8
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1338032 Sema6c

Phylogenomic databases

eggNOGiKOG3611 Eukaryota
ENOG410XQZC LUCA
HOVERGENiHBG072910

Miscellaneous databases

SOURCEiSearch...

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR001627 Semap_dom
IPR036352 Semap_dom_sf
IPR027231 Semaphorin
IPR015514 Semaphorin_6C
IPR015943 WD40/YVTN_repeat-like_dom_sf
PANTHERiPTHR11036 PTHR11036, 1 hit
PTHR11036:SF11 PTHR11036:SF11, 1 hit
PfamiView protein in Pfam
PF01403 Sema, 1 hit
SMARTiView protein in SMART
SM00630 Sema, 1 hit
SUPFAMiSSF101912 SSF101912, 1 hit
PROSITEiView protein in PROSITE
PS51004 SEMA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ6ZPG8_MOUSE
AccessioniPrimary (citable) accession number: Q6ZPG8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: January 31, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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