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UniProtKB - Q6ZI17 (OML2_ORYSJ)

Entry version 109 (07 Apr 2021)
Sequence version 1 (05 Jul 2004)
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Protein

Protein MEI2-like 2

Gene

ML2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probable RNA-binding protein that may play a role in growth regulation.By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • RNA binding Source: GO_Central
Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein MEI2-like 2
Short name:
OML2
Alternative name(s):
MEI2-like protein 2
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ML2
Ordered Locus Names:Os02g0719800, LOC_Os02g48790
ORF Names:OJ1008_D06.12-1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2
  • UP000000763 Componenti: Chromosome 2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004093461 – 848Protein MEI2-like 2Add BLAST848

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q6ZI17

PRoteomics IDEntifications database

More...PRIDEi		Q6ZI17

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q6ZI17, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q6ZI17, OS

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q6ZI17

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini197 – 270RRM 1PROSITE-ProRule annotationAdd BLAST74
Domaini282 – 355RRM 2PROSITE-ProRule annotationAdd BLAST74

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4660, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_012447_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q6ZI17

Identification of Orthologs from Complete Genome Data

More...OMAi		EMEPEDQ

Database of Orthologous Groups

More...OrthoDBi		1464915at2759

Family and domain databases

Conserved Domains Database

More...CDDi		cd12524, RRM1_MEI2_like, 1 hit
cd12531, RRM3_MEI2_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.30.70.330, 3 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR034453, MEI2-like_RRM1
IPR034454, MEI2-like_RRM3
IPR007201, Mei2-like_Rrm_C
IPR012677, Nucleotide-bd_a/b_plait_sf
IPR035979, RBD_domain_sf
IPR000504, RRM_dom

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00076, RRM_1, 2 hits
PF04059, RRM_2, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00360, RRM, 3 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF54928, SSF54928, 2 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50102, RRM, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q6ZI17-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDRPQDPFNS RGIAVPPAVK MRNMAGNNSP WIDPLPPPMN ARNGLANASL 
        60         70         80         90        100
FSTSLPVLPH EKINFLDSAR GTPLMDDASA KLKELDDDPE GKDYKFDFDL 
       110        120        130        140        150
RQIDDLLPNE DDLFAGITNE IEPAGQTNSM EELEEFDVFG SGGGMELDTD 
       160        170        180        190        200
PVESITAGLG NTSIADGLRG NGVNHFGPSN SASTVAGEHP YGEHPSRTLF 
       210        220        230        240        250
VRNINSNVDD TELRSLFEQY GDIRTLYTAT KHRGFVMISY FDIRAARGAM 
       260        270        280        290        300
RGLQNKPLRR RKLDIHFSIP KENPSDKDLN QGTLVIFNLD PSVSNEEVRQ 
       310        320        330        340        350
IFGTYGEVKE IRETPNKKHH KFIEFYDVRA AEAALRSLNK SEIAGKRIKL 
       360        370        380        390        400
EPSRPGGTRR NLMQQLGHDI DQDEPRSYRI PHVGSPIASS PPGAWAQYSS 
       410        420        430        440        450
PTDNNLLQAF NASPTGNGMS PIGMPPSLIS NAVKIAPIGK DSNWSKYDKV 
       460        470        480        490        500
FSNNNQPHGA AFQHSHSYQD HKSEHMSSSP GTLTGPEFLW GSPKPYSEHA 
       510        520        530        540        550
QSPIWRPPAI GHAIPSNTRS QGQGLLYGGR QASLFGSQDQ LHHHHVGSAP 
       560        570        580        590        600
SGAPFESHFG FLPESPETSY MNQVRFGNIG NIGSGRNGTG LMLNMAARAS 
       610        620        630        640        650
VNPVSALSGN MSDNNSSSFR PILSPRLGQS FYGNPTYQGP GSFGLDNSIE 
       660        670        680        690        700
RGRNRRVDSS VFQADSKKQY QLDLEKIRKG DDTRTTLMIK NIPNKYTSKM 
       710        720        730        740        750
LLAAIDEFHK GTYDFFYLPI DFKNKCNVGY AFINMISPVH IVSFYQAFNG 
       760        770        780        790        800
KKWEKFNSEK VASLAYARIQ GRTALISHFQ NSSLMNEDKR CRPILFHSNG 
       810        820        830        840 
PDAGNQEPFP INGICIHMPL EDGAIATGDP FGNEEDNNQN ERTAGEEL
Length:848
Mass (Da):93,612
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3ED8F8CFF0094E54
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0P0VP84A0A0P0VP84_ORYSJ
Os02g0719800 protein
Os02g0719800, OSNPB_020719800
456Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0P0VNW4A0A0P0VNW4_ORYSJ
Os02g0719800 protein
Os02g0719800, OSNPB_020719800
428Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AB244277 mRNA Translation: BAE79764.1
AP004040 Genomic DNA Translation: BAD12869.1
AP008208 Genomic DNA Translation: BAF09860.1
AP014958 Genomic DNA Translation: BAS80635.1
AK111503 mRNA Translation: BAG99283.1

NCBI Reference Sequences

More...RefSeqi		XP_015624974.1, XM_015769488.1

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		Os02t0719800-02; Os02t0719800-02; Os02g0719800

Database of genes from NCBI RefSeq genomes

More...GeneIDi		4330544

Gramene; a comparative resource for plants

More...Gramenei		Os02t0719800-02; Os02t0719800-02; Os02g0719800

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		osa:4330544

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB244277 mRNA Translation: BAE79764.1
AP004040 Genomic DNA Translation: BAD12869.1
AP008208 Genomic DNA Translation: BAF09860.1
AP014958 Genomic DNA Translation: BAS80635.1
AK111503 mRNA Translation: BAG99283.1
RefSeqiXP_015624974.1, XM_015769488.1

3D structure databases

SMRiQ6ZI17
ModBaseiSearch...

Proteomic databases

PaxDbiQ6ZI17
PRIDEiQ6ZI17

Genome annotation databases

EnsemblPlantsiOs02t0719800-02; Os02t0719800-02; Os02g0719800
GeneIDi4330544
GrameneiOs02t0719800-02; Os02t0719800-02; Os02g0719800
KEGGiosa:4330544

Phylogenomic databases

eggNOGiKOG4660, Eukaryota
HOGENOMiCLU_012447_1_0_1
InParanoidiQ6ZI17
OMAiEMEPEDQ
OrthoDBi1464915at2759

Gene expression databases

ExpressionAtlasiQ6ZI17, baseline and differential
GenevisibleiQ6ZI17, OS

Family and domain databases

CDDicd12524, RRM1_MEI2_like, 1 hit
cd12531, RRM3_MEI2_like, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR034453, MEI2-like_RRM1
IPR034454, MEI2-like_RRM3
IPR007201, Mei2-like_Rrm_C
IPR012677, Nucleotide-bd_a/b_plait_sf
IPR035979, RBD_domain_sf
IPR000504, RRM_dom
PfamiView protein in Pfam
PF00076, RRM_1, 2 hits
PF04059, RRM_2, 1 hit
SMARTiView protein in SMART
SM00360, RRM, 3 hits
SUPFAMiSSF54928, SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102, RRM, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiOML2_ORYSJ
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6ZI17
Secondary accession number(s): A0A0P0VNV9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 31, 2011
Last sequence update: July 5, 2004
Last modified: April 7, 2021
This is version 109 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
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