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UniProtKB - Q6ZCX1 (YSL17_ORYSJ)
Protein
Probable metal-nicotianamine transporter YSL17
Gene
YSL17
Organism
Oryza sativa subsp. japonica (Rice)
Status
Functioni
May be involved in the transport of nicotianamine-chelated metals.
By similarityGO - Molecular functioni
- oligopeptide transmembrane transporter activity Source: InterPro
Keywordsi
Biological process | Transport |
Names & Taxonomyi
Protein namesi | Recommended name: Probable metal-nicotianamine transporter YSL17Alternative name(s): Protein YELLOW STRIPE LIKE 17 Short name: OsYSL17 |
Gene namesi | Name:YSL17 Ordered Locus Names:Os08g0280300, LOC_Os08g17830 ORF Names:OJ1003_E05.7, P0026A08.33 |
Organismi | Oryza sativa subsp. japonica (Rice) |
Taxonomic identifieri | 39947 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa |
Proteomesi |
|
Subcellular locationi
Other locations
- Membrane Curated; Multi-pass membrane protein Curated
Other locations
- integral component of membrane Source: UniProtKB-KW
- membrane Source: GO_Central
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 43 – 63 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 67 – 87 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 114 – 134 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 157 – 177 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 216 – 236 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 277 – 297 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 322 – 342 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 395 – 415 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 424 – 444 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 463 – 483 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 511 – 531 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 567 – 587 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 607 – 627 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 644 – 664 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000363880 | 1 – 698 | Probable metal-nicotianamine transporter YSL17Add BLAST | 698 |
Proteomic databases
PaxDbi | Q6ZCX1 |
Expressioni
Tissue specificityi
Expressed at low levels in roots.1 Publication
Gene expression databases
Genevisiblei | Q6ZCX1, OS |
Structurei
3D structure databases
AlphaFoldDBi | Q6ZCX1 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 36 | DisorderedSequence analysisAdd BLAST | 36 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 23 | Basic and acidic residuesSequence analysisAdd BLAST | 23 |
Sequence similaritiesi
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG502QQ2H, Eukaryota |
HOGENOMi | CLU_015477_2_0_1 |
InParanoidi | Q6ZCX1 |
OrthoDBi | 525938at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR004813, OPT IPR045035, YSL-like |
PANTHERi | PTHR31645, PTHR31645, 1 hit |
Pfami | View protein in Pfam PF03169, OPT, 1 hit |
TIGRFAMsi | TIGR00728, OPT_sfam, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
Q6ZCX1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAEEARGGQR VVVDDDREDA SSVASSTERA FEGEPLPSLG ETVTARSAAV
60 70 80 90 100
SGVLGAVVSV VAMRLNLTSG LLPSLGVPAG LLGFFLARVW IRALDVVGVS
110 120 130 140 150
HLPFTRQENT LIQIAVVSCS TIAFSGGFGT YILGMSGKSA NEGHIGSHGR
160 170 180 190 200
NVEEPNIGRV IAFLFLVNFS GLFIIVPLRK MMIIRHRLTF PSGTATAHLI
210 220 230 240 250
NSFHTPHGAK QARLQVVTLF KSLGATVLWP IFQWFFAGGK NCGFQIFPTF
260 270 280 290 300
GMAAYRRGFY FDFSTTNVGI GMICPPMITA SMLAGSIVSW GILWPYIETK
310 320 330 340 350
AGRWFPENLD ANDLGGIMGY RVFVGVSMIL ADGLFTILSA LVRTACAMRK
360 370 380 390 400
RRRGASTVTA AVPPFQCLSA TERTMQSFDD RRRAQVFLRD SFPTWVAVAS
410 420 430 440 450
YAALAALSVV AVPLLYPQLG HRHVAAAYVA APVFAFCNAY GVGVTDMNLS
460 470 480 490 500
ATYGKIAMMV FSSWVGMDGG GVVAGLAACG IIVSAVSGSS DFMQDFKTGY
510 520 530 540 550
LTLTSPRAML VGQVAGTALG CVVNPAIFWV FYKVYNMGGG GGDGADVAPY
560 570 580 590 600
ARAYRGIAVL SVGRHGLPDH SVLLCKLFFA MALALSAARE VAERRRWRAL
610 620 630 640 650
RYIPSTIGVA VAFFVPPRIP VGMAVGCLAL HVWRRHVDAG GARLLLPAVA
660 670 680 690
SGLICGDGLG SLASSMLTLL RARPPICIKF VSRFENQKLD AFLATRHA
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A0P0XDV4 | A0A0P0XDV4_ORYSJ | Os08g0280300 protein | Os08g0280300, OSNPB_080280300 | 636 | Annotation score: |
Sequence cautioni
The sequence BAF23356 differs from that shown. Reason: Erroneous gene model prediction.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP003936 Genomic DNA Translation: BAC99405.1 AP004556 Genomic DNA Translation: BAC99534.1 AP008214 Genomic DNA Translation: BAF23356.2 Sequence problems. AP014964 Genomic DNA No translation available. AB190925 mRNA Translation: BAE91895.1 |
RefSeqi | XP_015649646.1, XM_015794160.1 |
Genome annotation databases
GeneIDi | 4345163 |
KEGGi | osa:4345163 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP003936 Genomic DNA Translation: BAC99405.1 AP004556 Genomic DNA Translation: BAC99534.1 AP008214 Genomic DNA Translation: BAF23356.2 Sequence problems. AP014964 Genomic DNA No translation available. AB190925 mRNA Translation: BAE91895.1 |
RefSeqi | XP_015649646.1, XM_015794160.1 |
3D structure databases
AlphaFoldDBi | Q6ZCX1 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 4530.OS08T0280300-00 |
Proteomic databases
PaxDbi | Q6ZCX1 |
Genome annotation databases
GeneIDi | 4345163 |
KEGGi | osa:4345163 |
Phylogenomic databases
eggNOGi | ENOG502QQ2H, Eukaryota |
HOGENOMi | CLU_015477_2_0_1 |
InParanoidi | Q6ZCX1 |
OrthoDBi | 525938at2759 |
Gene expression databases
Genevisiblei | Q6ZCX1, OS |
Family and domain databases
InterProi | View protein in InterPro IPR004813, OPT IPR045035, YSL-like |
PANTHERi | PTHR31645, PTHR31645, 1 hit |
Pfami | View protein in Pfam PF03169, OPT, 1 hit |
TIGRFAMsi | TIGR00728, OPT_sfam, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YSL17_ORYSJ | |
Accessioni | Q6ZCX1Primary (citable) accession number: Q6ZCX1 Secondary accession number(s): Q25CH1 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 10, 2009 |
Last sequence update: | July 5, 2004 | |
Last modified: | May 25, 2022 | |
This is version 86 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Oryza sativa (rice)
Index of Oryza sativa entries and their corresponding gene designations - SIMILARITY comments
Index of protein domains and families