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UniProtKB - Q6YYZ2 (4CLL3_ORYSJ)
Protein
4-coumarate--CoA ligase-like 3
Gene
4CLL3
Organism
Oryza sativa subsp. japonica (Rice)
Status
Functioni
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 459 | ATPBy similarity | 1 | |
Binding sitei | 474 | ATPBy similarity | 1 | |
Binding sitei | 565 | ATPBy similarity | 1 |
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 228 – 236 | ATPBy similarity | 9 | |
Nucleotide bindingi | 376 – 381 | ATPBy similarity | 6 |
GO - Molecular functioni
- ATP binding Source: UniProtKB-KW
- CoA-ligase activity Source: GO_Central
GO - Biological processi
- ubiquinone biosynthetic process Source: GO_Central
Keywordsi
Molecular function | Ligase |
Ligand | ATP-binding, Nucleotide-binding |
Enzyme and pathway databases
PlantReactomei | R-OSA-1119316, Phenylpropanoid biosynthesis R-OSA-1119531, Flavonoid biosynthesis |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:4CLL3 Ordered Locus Names:Os08g0143300, LOC_Os08g04770 ORF Names:P0025F03.16, P0473D02.38 |
Organismi | Oryza sativa subsp. japonica (Rice) |
Taxonomic identifieri | 39947 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza › Oryza sativa |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000351629 | 1 – 591 | 4-coumarate--CoA ligase-like 3Add BLAST | 591 |
Proteomic databases
PaxDbi | Q6YYZ2 |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 303 – 375 | SBD1Add BLAST | 73 | |
Regioni | 376 – 440 | SBD2Add BLAST | 65 |
Domaini
Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
Sequence similaritiesi
Belongs to the ATP-dependent AMP-binding enzyme family.Curated
Phylogenomic databases
eggNOGi | KOG1176, Eukaryota |
HOGENOMi | CLU_000022_59_2_1 |
InParanoidi | Q6YYZ2 |
OMAi | RVAAYKY |
OrthoDBi | 683933at2759 |
Family and domain databases
Gene3Di | 3.30.300.30, 1 hit 3.40.50.12780, 1 hit |
InterProi | View protein in InterPro IPR025110, AMP-bd_C IPR045851, AMP-bd_C_sf IPR020845, AMP-binding_CS IPR000873, AMP-dep_Synth/Lig IPR042099, ANL_N_sf |
Pfami | View protein in Pfam PF00501, AMP-binding, 1 hit PF13193, AMP-binding_C, 1 hit |
PROSITEi | View protein in PROSITE PS00455, AMP_BINDING, 1 hit |
i Sequence
Sequence statusi: Complete.
Q6YYZ2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MQRDAIAAAR NAGCSSGRIS QPPPPPFYSA ATGIYSSIHP PVALPTDPSL
60 70 80 90 100
TLVAHLFARL PLADPGAPTL VDAATASAVS RADLRRLVAS LAAGLRRRHG
110 120 130 140 150
VRKGSVVLLL LPNSVAFPVS FLAVLAAGAV ATTMNPSSSP AEIAAQARAT
160 170 180 190 200
GACLVLASRD GAARLPPLAA PVVLVPEILD HSAAADDGDD DQRVFAAFRA
210 220 230 240 250
MLDGGGGDGT ETAVPVVGQD DAVAILYSSG TSGRSKGVVL THRNLIAMTE
260 270 280 290 300
LFVRFEASQY HARGARENVY MAALPMSHVY GLSLFAVGLL SIGATVVVMR
310 320 330 340 350
RFDAGDAVAA IGRYKVTHMP LVPPIMAAMV RAAAAGGVPP SQVASLVQVS
360 370 380 390 400
CGAAPITAAL IHEFLQAFPH VDFIQGYGMT ESTAVGTRGF NTSKHKKYTS
410 420 430 440 450
VGLLAPNMHA KIVHLESSSC LPPGFSGELW LHGPGIMKGY LSDDDDACTR
460 470 480 490 500
KDGWLRTGDI AYFDLDGYLY IVGRLKDTIK YKGFQIAPGD LEEVLIHHPE
510 520 530 540 550
ILDVAVTSAE DEEAGEIPVA FVVRRSGSNL SCKQVMEYVA KQVAPYKRVR
560 570 580 590
KVVFVEAIPK SPAGKVLRRL LRNSHDTAAA ATSSCSISSK L
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP004381 Genomic DNA Translation: BAD17022.1 AP005542 Genomic DNA Translation: BAD13196.1 AP008214 Genomic DNA Translation: BAH94104.1 AP014964 Genomic DNA Translation: BAT03799.1 |
RefSeqi | XP_015650198.1, XM_015794712.1 |
Genome annotation databases
EnsemblPlantsi | Os08t0143300-00; Os08t0143300-00; Os08g0143300 |
GeneIDi | 9269113 |
Gramenei | Os08t0143300-00; Os08t0143300-00; Os08g0143300 |
KEGGi | osa:9269113 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP004381 Genomic DNA Translation: BAD17022.1 AP005542 Genomic DNA Translation: BAD13196.1 AP008214 Genomic DNA Translation: BAH94104.1 AP014964 Genomic DNA Translation: BAT03799.1 |
RefSeqi | XP_015650198.1, XM_015794712.1 |
3D structure databases
AlphaFoldDBi | Q6YYZ2 |
SMRi | Q6YYZ2 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 4530.OS08T0143300-00 |
Proteomic databases
PaxDbi | Q6YYZ2 |
Genome annotation databases
EnsemblPlantsi | Os08t0143300-00; Os08t0143300-00; Os08g0143300 |
GeneIDi | 9269113 |
Gramenei | Os08t0143300-00; Os08t0143300-00; Os08g0143300 |
KEGGi | osa:9269113 |
Phylogenomic databases
eggNOGi | KOG1176, Eukaryota |
HOGENOMi | CLU_000022_59_2_1 |
InParanoidi | Q6YYZ2 |
OMAi | RVAAYKY |
OrthoDBi | 683933at2759 |
Enzyme and pathway databases
PlantReactomei | R-OSA-1119316, Phenylpropanoid biosynthesis R-OSA-1119531, Flavonoid biosynthesis |
Gene expression databases
Genevisiblei | Q6YYZ2, OS |
Family and domain databases
Gene3Di | 3.30.300.30, 1 hit 3.40.50.12780, 1 hit |
InterProi | View protein in InterPro IPR025110, AMP-bd_C IPR045851, AMP-bd_C_sf IPR020845, AMP-binding_CS IPR000873, AMP-dep_Synth/Lig IPR042099, ANL_N_sf |
Pfami | View protein in Pfam PF00501, AMP-binding, 1 hit PF13193, AMP-binding_C, 1 hit |
PROSITEi | View protein in PROSITE PS00455, AMP_BINDING, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | 4CLL3_ORYSJ | |
Accessioni | Q6YYZ2Primary (citable) accession number: Q6YYZ2 Secondary accession number(s): C7J6B0 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 14, 2008 |
Last sequence update: | July 5, 2004 | |
Last modified: | May 25, 2022 | |
This is version 87 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Oryza sativa (rice)
Index of Oryza sativa entries and their corresponding gene designations - SIMILARITY comments
Index of protein domains and families