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Protein

Putative uncharacterized protein encoded by LINC00114

Gene

LINC00114

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Caution

Product of a dubious CDS prediction. Probable non-coding RNA. At least 6 alternative mRNA transcripts exist, with consensus splice donor and acceptor sites, but no coding potential nor murine ortholog. This protein sequence corresponds to the so-called isoforms C21orf24-6 and C21orf24-7.Curated

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein encoded by LINC00114
Gene namesi
Name:LINC00114
Synonyms:C21orf24, NCRNA00114
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:1265 LINC00114
MIMi611723 gene
neXtProtiNX_Q6XXX2

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002442631 – 140Putative uncharacterized protein encoded by LINC00114Add BLAST140

Proteomic databases

PRIDEiQ6XXX2
ProteomicsDBi67820

Expressioni

Tissue specificityi

Expressed in a range of cell lines, including B-cell lymphoma and prostate.1 Publication

Gene expression databases

CleanExiHS_NCRNA00114

Interactioni

Protein-protein interaction databases

IntActiQ6XXX2, 1 interactor

Sequencei

Sequence statusi: Complete.

Q6XXX2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQTTWQPGCS YPTSWLSSQE SFSKMRTGWR GAIPLRWRNR ARNREKPHSP
60 70 80 90 100
RAVSSPATHS LPPSNPCRLT PTLSSARPRE GSCPSKCSCP GGNWSNTALS
110 120 130 140
AELMWAEGRF SGGCLPVYMR QNINPGCQEQ WEGEERSRWL
Length:140
Mass (Da):15,753
Last modified:July 5, 2004 - v1
Checksum:i8419A38AB511EBDC
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_02688421S → T. Corresponds to variant dbSNP:rs2836662Ensembl.1
Natural variantiVAR_02688539N → K. Corresponds to variant dbSNP:rs11908799Ensembl.1
Natural variantiVAR_02688652A → S. Corresponds to variant dbSNP:rs11908743Ensembl.1
Natural variantiVAR_026887104M → R. Corresponds to variant dbSNP:rs16996776Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY204749 mRNA Translation: AAP41722.1
AY204748 mRNA Translation: AAP41721.1
UniGeneiHs.278704

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY204749 mRNA Translation: AAP41722.1
AY204748 mRNA Translation: AAP41721.1
UniGeneiHs.278704

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ6XXX2, 1 interactor

Proteomic databases

PRIDEiQ6XXX2
ProteomicsDBi67820

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiLINC00114
HGNCiHGNC:1265 LINC00114
MIMi611723 gene
neXtProtiNX_Q6XXX2
GenAtlasiSearch...

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

CleanExiHS_NCRNA00114

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiCU024_HUMAN
AccessioniPrimary (citable) accession number: Q6XXX2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: June 20, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  2. Human chromosome 21
    Human chromosome 21: entries, gene names and cross-references to MIM
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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