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Entry version 110 (02 Jun 2021)
Sequence version 1 (05 Jul 2004)
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Protein

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

Gene

B3GNT9

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...
PathwayCommonsi
Q6UX72

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-HSA-913709, O-linked glycosylation of mucins

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
GT31, Glycosyltransferase Family 31

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9Imported (EC:2.4.1.-)
Short name:
BGnT-9Imported
Short name:
Beta-1,3-Gn-T9
Short name:
Beta-1,3-N-acetylglucosaminyltransferase 9
Short name:
Beta3Gn-T9Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:B3GNT9Imported
ORF Names:UNQ1922/PRO4397
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:28714, B3GNT9

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q6UX72

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSG00000237172.3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 10CytoplasmicSequence analysis10
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei11 – 27Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST17
Topological domaini28 – 402LumenalSequence analysisAdd BLAST375

Keywords - Cellular componenti

Golgi apparatus, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
84752

Open Targets

More...
OpenTargetsi
ENSG00000237172

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA164716431

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q6UX72, Tdark

Genetic variation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
B3GNT9

Domain mapping of disease mutations (DMDM)

More...
DMDMi
74738184

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003527621 – 402UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9Add BLAST402

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q6UX72

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q6UX72

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6UX72

PeptideAtlas

More...
PeptideAtlasi
Q6UX72

PRoteomics IDEntifications database

More...
PRIDEi
Q6UX72

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
67574

Consortium for Top Down Proteomics

More...
TopDownProteomicsi
Q6UX72

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...
GlyGeni
Q6UX72, 3 sites, 1 O-linked glycan (3 sites)

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6UX72

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6UX72

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000237172, Expressed in prostate gland and 205 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q6UX72, HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
ENSG00000237172, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
124240, 2 interactors

Protein interaction database and analysis system

More...
IntActi
Q6UX72, 2 interactors

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000400157

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q6UX72, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q6UX72

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni32 – 83DisorderedSequence analysisAdd BLAST52

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyltransferase 31 family.Sequence analysis

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2287, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000162243

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_036849_5_2_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6UX72

Identification of Orthologs from Complete Genome Data

More...
OMAi
AEIWLMW

Database of Orthologous Groups

More...
OrthoDBi
1037602at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6UX72

TreeFam database of animal gene trees

More...
TreeFami
TF318639

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002659, Glyco_trans_31

The PANTHER Classification System

More...
PANTHERi
PTHR11214, PTHR11214, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01762, Galactosyl_T, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q6UX72-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRRRLRLRRD ALLTLLLGAS LGLLLYAQRD GAAPTASAPR GRGRAAPRPT
60 70 80 90 100
PGPRAFQLPD AGAAPPAYEG DTPAPPTPTG PFDFARYLRA KDQRRFPLLI
110 120 130 140 150
NQPHKCRGDG APGGRPDLLI AVKSVAEDFE RRQAVRQTWG AEGRVQGALV
160 170 180 190 200
RRVFLLGVPR GAGSGGADEV GEGARTHWRA LLRAESLAYA DILLWAFDDT
210 220 230 240 250
FFNLTLKEIH FLAWASAFCP DVRFVFKGDA DVFVNVGNLL EFLAPRDPAQ
260 270 280 290 300
DLLAGDVIVH ARPIRTRASK YYIPEAVYGL PAYPAYAGGG GFVLSGATLH
310 320 330 340 350
RLAGACAQVE LFPIDDVFLG MCLQRLRLTP EPHPAFRTFG IPQPSAAPHL
360 370 380 390 400
STFDPCFYRE LVVVHGLSAA DIWLMWRLLH GPHGPACAHP QPVAAGPFQW

DS
Length:402
Mass (Da):43,751
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE4FFEBDFD5F8F2FB
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BC012191 differs from that shown. Reason: Frameshift.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY358485 mRNA Translation: AAQ88849.1
CH471092 Genomic DNA Translation: EAW83079.1
BC012191 mRNA No translation available.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS45509.1

NCBI Reference Sequences

More...
RefSeqi
NP_171608.2, NM_033309.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000449549; ENSP00000400157; ENSG00000237172

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
84752

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:84752

UCSC genome browser

More...
UCSCi
uc002erf.4, human

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY358485 mRNA Translation: AAQ88849.1
CH471092 Genomic DNA Translation: EAW83079.1
BC012191 mRNA No translation available.
CCDSiCCDS45509.1
RefSeqiNP_171608.2, NM_033309.2

3D structure databases

SMRiQ6UX72
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi124240, 2 interactors
IntActiQ6UX72, 2 interactors
STRINGi9606.ENSP00000400157

Protein family/group databases

CAZyiGT31, Glycosyltransferase Family 31

PTM databases

GlyGeniQ6UX72, 3 sites, 1 O-linked glycan (3 sites)
iPTMnetiQ6UX72
PhosphoSitePlusiQ6UX72

Genetic variation databases

BioMutaiB3GNT9
DMDMi74738184

Proteomic databases

jPOSTiQ6UX72
MassIVEiQ6UX72
PaxDbiQ6UX72
PeptideAtlasiQ6UX72
PRIDEiQ6UX72
ProteomicsDBi67574
TopDownProteomicsiQ6UX72

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
65852, 9 antibodies

The DNASU plasmid repository

More...
DNASUi
84752

Genome annotation databases

EnsembliENST00000449549; ENSP00000400157; ENSG00000237172
GeneIDi84752
KEGGihsa:84752
UCSCiuc002erf.4, human

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
84752
DisGeNETi84752

GeneCards: human genes, protein and diseases

More...
GeneCardsi
B3GNT9
HGNCiHGNC:28714, B3GNT9
HPAiENSG00000237172, Low tissue specificity
neXtProtiNX_Q6UX72
OpenTargetsiENSG00000237172
PharmGKBiPA164716431
VEuPathDBiHostDB:ENSG00000237172.3

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG2287, Eukaryota
GeneTreeiENSGT00940000162243
HOGENOMiCLU_036849_5_2_1
InParanoidiQ6UX72
OMAiAEIWLMW
OrthoDBi1037602at2759
PhylomeDBiQ6UX72
TreeFamiTF318639

Enzyme and pathway databases

PathwayCommonsiQ6UX72
ReactomeiR-HSA-913709, O-linked glycosylation of mucins

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
84752, 6 hits in 981 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
B3GNT9, human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
84752
PharosiQ6UX72, Tdark

Protein Ontology

More...
PROi
PR:Q6UX72
RNActiQ6UX72, protein

Gene expression databases

BgeeiENSG00000237172, Expressed in prostate gland and 205 other tissues
GenevisibleiQ6UX72, HS

Family and domain databases

InterProiView protein in InterPro
IPR002659, Glyco_trans_31
PANTHERiPTHR11214, PTHR11214, 1 hit
PfamiView protein in Pfam
PF01762, Galactosyl_T, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB3GN9_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6UX72
Secondary accession number(s): Q96EK0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: July 5, 2004
Last modified: June 2, 2021
This is version 110 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 16
    Human chromosome 16: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families
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