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Entry version 101 (02 Dec 2020)
Sequence version 1 (05 Jul 2004)
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Protein
Submitted name:

Conjugal transfer Mating pair stabilization protein TraN

Gene

traN

Organism
Escherichia coli
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Conjugal transfer Mating pair stabilization protein TraNImported
Submitted name:
Conjugal transfer mating pair stabilization proteinImported
Submitted name:
Conjugal transfer proteinImported
Submitted name:
Conjugal transfer protein TraNImported
Submitted name:
Mating contact stabilization protein TraNImported
Submitted name:
Mating pair stabilization outer membrane protein TraNImported
Submitted name:
TraNImported
Submitted name:
Type-F conjugative transfer system mating-pair stabilization protein TraNImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:traNImported
ORF Names:A9P13_27280Imported, AWG78_025235Imported, BHF03_25290Imported, BHS81_31040Imported, BK248_24785Imported, BON63_15815Imported, BON65_02125Imported, BON66_24420Imported, BON95_20340Imported, BON96_28440Imported, BON98_03435Imported, C5N07_26065Imported, CDL37_21600Imported, COD46_23760Imported, CRT43_27765Imported, D0X26_01040Imported, D6004_21030Imported, DM296_22840Imported, DOT81_24460Imported, E5P24_18495Imported, EC3426_05202Imported, ECTO124_05372Imported, ELT17_16280Imported, ELT17_26120Imported, ELV28_24080Imported, ELV28_29970Imported, ExPECSC065_04881Imported, EXX53_20355Imported, FNJ67_26445Imported, pHK01_081Imported, pHN3A11_070Imported, RCS51_P0116Imported, RCS57TR364_P0046Imported, RCS65_P0064Imported, RCS66_P0025Imported, RCS89_P0070Imported, UN86_19720Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates if the gene coding for the protein originates from the hydrogenosome, the mitochondrion, the nucleomorph, different plastids or a plasmid. The absence of this section means that the gene is located in one of the main chromosomal element(s).<p><a href='/help/encoded_on' target='_top'>More...</a></p>Encoded oniPlasmid 3Imported
Plasmid 4Imported
Plasmid NR1Imported
Plasmid RCS51_pImported
Plasmid RCS57TR364_pImported
Plasmid RCS65_pImported
Plasmid RCS66_pImported
Plasmid RCS89_pImported
Plasmid URMC_107_p_153227Imported
Plasmid URMC_26_p_83138Imported
Plasmid p4_4.2Imported
Plasmid p94-1Imported
Plasmid pC15-1aImported
Plasmid pCA08Imported
Plasmid pFOS-HK151325Imported
Plasmid pHK01Imported
Plasmid pHK08Imported
Plasmid pHK23aImported
Plasmid pHN3A11Imported
Plasmid pO26-LImported
Plasmid pXZImported
Plasmid pYHCCImported
Plasmid pZSH6-blaCTX-M-3Imported
Plasmid pzsh6-blactx-m-3Imported
Plasmid rcs51_pImported
Plasmid rcs57tr364_pImported
Plasmid rcs65_pImported
Plasmid rcs66_pImported
Plasmid rcs89_pImported
Plasmid unnamed1Imported
Plasmid unnamed3Imported
Plasmid urmc_107_p_153227Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiEscherichia coliImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri562 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 18Sequence analysisAdd BLAST18
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501509848819 – 616Sequence analysisAdd BLAST598

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR014121, TraN_Ftype

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF06986, TraN, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02750, TraN_Ftype, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q6SJ08-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKRILPLILA LVAGMAQADS NSDYRAGSDF ARQIQGQGTG SIQGFKPQES
60 70 80 90 100
IPSYNANPDE TKYYGGVTAG GDGGLKNDGT TEWATGETGK TITESFMNKP
110 120 130 140 150
KDILSPDAPF IQTGRDVVNR ADSIVGNTGQ QCSAQEINRS EFTNYTCERD
160 170 180 190 200
TMVEEYCTRT ASITGDWKYT DEYREVTIPH SQFRFSMNGL KLVFSVTAPV
210 220 230 240 250
TGTVESASLS VYAAFFFLNS RYTFMNTTFN VGLANGQSDT YPLSGATGLQ
260 270 280 290 300
VTQGQVLTGS GCTANGNCLP HGNGDRKVYE SLVSGASTFT LKLRMKVRDK
310 320 330 340 350
EWVPRVEWVE SCPFNKADGV LTGTECSEPG GTKTGVMEGK PWNITQACWA
360 370 380 390 400
YRDKYVTQSA DNGTCQKYVD NPACTLASRQ CAFYSDEGTC LHEYATYSCE
410 420 430 440 450
SRTSGKVMVC GGDVFCLDGE CDKAQSGKSS DFGEAVSQLA ALAAAGKDVA
460 470 480 490 500
ALNGVDVRAF TGEAKFCRKA AAGFSNCCKD GGWGQDVGLA KCNSEEKALG
510 520 530 540 550
KAKDNKLTVS VGEFCSKKVL GVCLQKKRSY CQFDSKLAQI VQQQGRNGQL
560 570 580 590 600
RIGFGSAKHP DCRGITVDEL QKIQFDRLDF TNFYEDLMNN QKIPDSGVLT
610
QKVKEQIADQ LKQAGQ
Length:616
Mass (Da):66,736
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFFDA640FCAFF7DD3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY458016 Genomic DNA Translation: AAR25099.1
DQ364638 Genomic DNA Translation: ABD60034.1
FJ449539 Genomic DNA Translation: ACL12470.1
HM355591 Genomic DNA Translation: ADK71111.1
JN087529 Genomic DNA Translation: AEO51592.1
JQ432559 Genomic DNA Translation: AFI99246.1
JF927996 Genomic DNA Translation: AFM38959.1
JX627737 Genomic DNA Translation: AFV92836.1
JX997935 Genomic DNA Translation: AGE98104.1
CP009233 Genomic DNA Translation: AKD26818.1
KR078259 Genomic DNA Translation: AKI07004.1
CP020517 Genomic DNA Translation: AVU63519.1
CP023828 Genomic DNA Translation: AZH42398.1
AAAATJ010000067 Genomic DNA Translation: EAA2004456.1
AAABDV010000050 Genomic DNA Translation: EAA3349079.1
AAAFQE010000051 Genomic DNA Translation: EAB7437873.1
BFJD01000108 Genomic DNA Translation: GCS11419.1
JZDU01000102 Genomic DNA Translation: KJW28638.1
MIIL01000002 Genomic DNA Translation: OII96329.1
MOFD01000065 Genomic DNA Translation: OJK71497.1
NAHY01000820 Genomic DNA Translation: ORJ58335.1
NIIS01000074 Genomic DNA Translation: OXK49132.1
NWAO01000052 Genomic DNA Translation: PBR49945.1
PUJR01000055 Genomic DNA Translation: PQP06110.1
CP041579 Genomic DNA Translation: QDN44022.1
QVOP01000001 Genomic DNA Translation: RFT90752.1
LVSP02000003 Genomic DNA Translation: RRO38041.1
SHIF01000033 Genomic DNA Translation: RZX79450.1
LT985252 Genomic DNA Translation: SPD99097.1
LT985265 Genomic DNA Translation: SPE00265.1
LT985274 Genomic DNA Translation: SPE01289.1
LT985277 Genomic DNA Translation: SPE01597.1
LT985304 Genomic DNA Translation: SPE03674.1
LS992188 Genomic DNA Translation: SYX53146.1
LS992182 Genomic DNA Translation: SYX53830.1
MTWW01000062 Genomic DNA Translation: TEZ01571.1
MTWZ01000100 Genomic DNA Translation: TEZ11958.1
MTWY01000022 Genomic DNA Translation: TEZ19687.1
MTYD01000093 Genomic DNA Translation: TFA61156.1
MTYC01000045 Genomic DNA Translation: TFA62942.1
MTYF01000026 Genomic DNA Translation: TFA80750.1
RZAF01000138 Genomic DNA Translation: TFT20443.1
RZAF01000032 Genomic DNA Translation: TFT25207.1
SROU01000040 Genomic DNA Translation: TGJ45934.1
RZDS01000152 Genomic DNA Translation: TKJ48241.1
RZDS01000057 Genomic DNA Translation: TKJ49168.1

NCBI Reference Sequences

More...
RefSeqi
NP_957618.1, NC_005327.1
WP_000821856.1, NZ_WVVN01000063.1
YP_001096487.1, NC_009133.1
YP_002456208.1, NC_011812.1
YP_006952257.1, NC_019057.1
YP_006953439.1, NC_019072.1
YP_006953966.1, NC_019090.1
YP_006954285.1, NC_019095.1
YP_006990778.1, NC_019424.1
YP_007447564.1, NC_020278.2

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
KJW28638; KJW28638; UN86_19720

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
13905187
13906361
13906886
13906972
13982340
14612578
2716493
40044158
4924812
7256862

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|562.11480.peg.909

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY458016 Genomic DNA Translation: AAR25099.1
DQ364638 Genomic DNA Translation: ABD60034.1
FJ449539 Genomic DNA Translation: ACL12470.1
HM355591 Genomic DNA Translation: ADK71111.1
JN087529 Genomic DNA Translation: AEO51592.1
JQ432559 Genomic DNA Translation: AFI99246.1
JF927996 Genomic DNA Translation: AFM38959.1
JX627737 Genomic DNA Translation: AFV92836.1
JX997935 Genomic DNA Translation: AGE98104.1
CP009233 Genomic DNA Translation: AKD26818.1
KR078259 Genomic DNA Translation: AKI07004.1
CP020517 Genomic DNA Translation: AVU63519.1
CP023828 Genomic DNA Translation: AZH42398.1
AAAATJ010000067 Genomic DNA Translation: EAA2004456.1
AAABDV010000050 Genomic DNA Translation: EAA3349079.1
AAAFQE010000051 Genomic DNA Translation: EAB7437873.1
BFJD01000108 Genomic DNA Translation: GCS11419.1
JZDU01000102 Genomic DNA Translation: KJW28638.1
MIIL01000002 Genomic DNA Translation: OII96329.1
MOFD01000065 Genomic DNA Translation: OJK71497.1
NAHY01000820 Genomic DNA Translation: ORJ58335.1
NIIS01000074 Genomic DNA Translation: OXK49132.1
NWAO01000052 Genomic DNA Translation: PBR49945.1
PUJR01000055 Genomic DNA Translation: PQP06110.1
CP041579 Genomic DNA Translation: QDN44022.1
QVOP01000001 Genomic DNA Translation: RFT90752.1
LVSP02000003 Genomic DNA Translation: RRO38041.1
SHIF01000033 Genomic DNA Translation: RZX79450.1
LT985252 Genomic DNA Translation: SPD99097.1
LT985265 Genomic DNA Translation: SPE00265.1
LT985274 Genomic DNA Translation: SPE01289.1
LT985277 Genomic DNA Translation: SPE01597.1
LT985304 Genomic DNA Translation: SPE03674.1
LS992188 Genomic DNA Translation: SYX53146.1
LS992182 Genomic DNA Translation: SYX53830.1
MTWW01000062 Genomic DNA Translation: TEZ01571.1
MTWZ01000100 Genomic DNA Translation: TEZ11958.1
MTWY01000022 Genomic DNA Translation: TEZ19687.1
MTYD01000093 Genomic DNA Translation: TFA61156.1
MTYC01000045 Genomic DNA Translation: TFA62942.1
MTYF01000026 Genomic DNA Translation: TFA80750.1
RZAF01000138 Genomic DNA Translation: TFT20443.1
RZAF01000032 Genomic DNA Translation: TFT25207.1
SROU01000040 Genomic DNA Translation: TGJ45934.1
RZDS01000152 Genomic DNA Translation: TKJ48241.1
RZDS01000057 Genomic DNA Translation: TKJ49168.1
RefSeqiNP_957618.1, NC_005327.1
WP_000821856.1, NZ_WVVN01000063.1
YP_001096487.1, NC_009133.1
YP_002456208.1, NC_011812.1
YP_006952257.1, NC_019057.1
YP_006953439.1, NC_019072.1
YP_006953966.1, NC_019090.1
YP_006954285.1, NC_019095.1
YP_006990778.1, NC_019424.1
YP_007447564.1, NC_020278.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiKJW28638; KJW28638; UN86_19720
GeneIDi13905187
13906361
13906886
13906972
13982340
14612578
2716493
40044158
4924812
7256862
PATRICifig|562.11480.peg.909

Family and domain databases

InterProiView protein in InterPro
IPR014121, TraN_Ftype
PfamiView protein in Pfam
PF06986, TraN, 1 hit
TIGRFAMsiTIGR02750, TraN_Ftype, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ6SJ08_ECOLX
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6SJ08
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 2, 2020
This is version 101 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

PlasmidImported
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