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UniProtKB - Q6RCR1 (Q6RCR1_LEGPN)

Entry version 38 (10 Feb 2021)
Sequence version 1 (05 Jul 2004)
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Protein
Submitted name:

SidE

Gene
N/A
Organism
Legionella pneumophila
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
SidEImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLegionella pneumophilaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri446 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Legionellaceae › Legionella

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q6RCR1

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 172SidE_DUBInterPro annotationAdd BLAST172
Domaini246 – 452SidEInterPro annotationAdd BLAST207
Domaini591 – 926SidE_mARTInterPro annotationAdd BLAST336

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni476 – 497DisorderedSequence analysisAdd BLAST22

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1133 – 1153Sequence analysisAdd BLAST21
Coiled coili1277 – 1327Sequence analysisAdd BLAST51
Coiled coili1391 – 1418Sequence analysisAdd BLAST28

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR043934, SidE_DUB
IPR043935, SidE_mART
IPR021014, SidE_PDE

Pfam protein domain database

More...Pfami		View protein in Pfam
PF12252, SidE, 1 hit
PF19049, SidE_DUB, 1 hit
PF19048, SidE_mART, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q6RCR1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPKYVEGIEL TQEGMHAIFE RMGHPNITSG TIYNGEPTID KGALDRQGFM 
        60         70         80         90        100
PVLTGVSPRQ DSGHWIMLIK GQGNQYFLFD PLGESSGKYY QNILAKKLPG 
       110        120        130        140        150
ATLSVIPNNA GLNMGLCGYW VASVGLRAHA ALTQPIPPSL RNLGQTITQE 
       160        170        180        190        200
MRDELTQDGS EKITQWLRAV GNEFPDGDIQ PDATALRRAT EKNVRIDEFQ 
       210        220        230        240        250
PVLTGTSPKE ISINPTAPQE VSVPTWNGFS LYTDETVRNA ARYAYDNYLG 
       260        270        280        290        300
KPYTGTVEAT PVNFGGQMVY RQHHGLAHTL RTMAYAEIIV EEARKAKLRG 
       310        320        330        340        350
ESLKTFADGR TLADVTPEEL RKIMIAQAFF VTGRDDEESS KNYEKYHEQS 
       360        370        380        390        400
RDAFLKYVEE NKSTLIPDVF KDEKDVKFYA DVIEDKDHKW ADSPAHVLVN 
       410        420        430        440        450
QGHMVDLVRV KQPPESYLEY YFSQLQPWIG STATEAVFAT QRQFFHATYE 
       460        470        480        490        500
AVAGFDSENK EPHLVVDGLG RYVIGQDGNP IREESDDEDE EESGELKFFS 
       510        520        530        540        550
QKKKLEENQR YMRVDEYLKL DEVQKRFPGA GKKLDGGLPG LKEYQYLQRL 
       560        570        580        590        600
NSINRARCEN DVDFCLGQLQ TAHHQTKITP IKRAFQSSSE KARRQPNMDE 
       610        620        630        640        650
IAAARIVQQI MANPDCIHDD HVFLNGQKLE EKFFRDLLAK CDMAIVGSLL 
       660        670        680        690        700
NDTDIRNIDT LMQHERNTEF HSTDAKAKPV KLGETWEKTI RSGGGVTQIK 
       710        720        730        740        750
HDLIFLMQND AWYHTRVNAI AQNRDKDSTF KEVLITALMT PLTNKSLMDT 
       760        770        780        790        800
SRSPAPKTLF RGLDLSEEFK NKLINQAETI IANTTEHLFT DLSTEAFKQI 
       810        820        830        840        850
KLNDFSQVSA RTCASTSTNI EVPRTIFGSN TIFEILDPDG LLHPKQVGTH 
       860        870        880        890        900
VSGSESEYSI YLPEDVALVP IKVSFDGKTG KGKDRHIFTL VAVKSPDFTP 
       910        920        930        940        950
RHESGYAVGP LLKMQTPKLE EIQRLVEQAR EEPDLERVFN LQSRVARQAK 
       960        970        980        990       1000
FSTESGYKTF LNEKVAPVLE QSLNGLLDNN VTILGKVLSA FPSDGQWSAF 
      1010       1020       1030       1040       1050
NSVEARQMKI QMDAIKQMVE KKAVLEGQIL PALAQCQNAL EKQNIAGALQ 
      1060       1070       1080       1090       1100
ALRNIPSEKE MQTMLSISGG LRGQIQRAKQ DLTETLEPLQ RAITAKLVSD 
      1110       1120       1130       1140       1150
QEKVKVRYEK LIAGIPQQIA DLEKAELADL AKVKKVVSRF NHLQEELKLL 
      1160       1170       1180       1190       1200
RNEKIRMHTG SEKVDFSDIA QLEAQLQKIH TKLYDAYLVE LTKEISALVK 
      1210       1220       1230       1240       1250
EKPKNLADVK RMVSNFYAMS ADIEQLRQEK IKEHGESKDP IDMSDIDKLK 
      1260       1270       1280       1290       1300
EELQKINQFL VKAMGTNIRV SLNQMEVKTF DAQEKEAQQN LKQLDALINK 
      1310       1320       1330       1340       1350
LESSDAVQKQ KEELEKLNQL LVEKRKAYPA MVQLQFRSEA LIIHLRELCE 
      1360       1370       1380       1390       1400
AHQAQMAKTR NVRAQEITNG RWKVQWLTDW VGLTTDERVT LANKEKELAK 
      1410       1420       1430       1440       1450
FKEDLNNDEY DLQELISNLA EKNPSELEEA IGISKESAQK LHKLLTHLNH 
      1460       1470       1480       1490 
STTFMSKIEQ RLQSIDELLN EFGKQAPRTE MIKTVEEKQG TLLRL
Length:1,495
Mass (Da):169,413
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9C0844457989CA71
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AY504676 Genomic DNA Translation: AAR90355.1

NCBI Reference Sequences

More...RefSeqi		WP_015444908.1, NZ_UGOV01000002.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		57034239

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY504676 Genomic DNA Translation: AAR90355.1
RefSeqiWP_015444908.1, NZ_UGOV01000002.1

3D structure databases

SMRiQ6RCR1
ModBaseiSearch...

Genome annotation databases

GeneIDi57034239

Family and domain databases

InterProiView protein in InterPro
IPR043934, SidE_DUB
IPR043935, SidE_mART
IPR021014, SidE_PDE
PfamiView protein in Pfam
PF12252, SidE, 1 hit
PF19049, SidE_DUB, 1 hit
PF19048, SidE_mART, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ6RCR1_LEGPN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6RCR1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 10, 2021
This is version 38 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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