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Entry version 114 (13 Nov 2019)
Sequence version 1 (05 Jul 2004)
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Protein

DmX-like protein 1

Gene

Dmxl1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
DmX-like protein 1
Short name:
X-like 1 protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Dmxl1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 18

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2443926 Dmxl1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002233231 – 3013DmX-like protein 1Add BLAST3013

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei322PhosphoserineBy similarity1
Modified residuei420PhosphoserineCombined sources1
Modified residuei423PhosphoserineCombined sources1
Modified residuei434PhosphoserineCombined sources1
Modified residuei572PhosphoserineCombined sources1
Modified residuei916PhosphoserineCombined sources1
Modified residuei922PhosphoserineCombined sources1
Modified residuei1829PhosphoserineBy similarity1
Modified residuei1896PhosphoserineBy similarity1
Modified residuei1903PhosphoserineCombined sources1
Modified residuei1965PhosphoserineCombined sources1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q6PNC0

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q6PNC0

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q6PNC0

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6PNC0

PRoteomics IDEntifications database

More...
PRIDEi
Q6PNC0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6PNC0

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6PNC0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000037416 Expressed in 268 organ(s), highest expression level in spleen

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q6PNC0 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q6PNC0 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
232188, 2 interactors

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000045559

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati108 – 145WD 1Add BLAST38
Repeati164 – 204WD 2Add BLAST41
Repeati227 – 275WD 3Add BLAST49
Repeati474 – 514WD 4Add BLAST41
Repeati578 – 619WD 5Add BLAST42
Repeati842 – 893WD 6Add BLAST52
Repeati970 – 1008WD 7Add BLAST39
Repeati1145 – 1193WD 8Add BLAST49
Repeati1208 – 1248WD 9Add BLAST41
Repeati2728 – 2769WD 10Add BLAST42
Repeati2771 – 2810WD 11Add BLAST40
Repeati2822 – 2864WD 12Add BLAST43
Repeati2870 – 2909WD 13Add BLAST40
Repeati2912 – 2951WD 14Add BLAST40
Repeati2964 – 3002WD 15Add BLAST39

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1064 Eukaryota
ENOG410XPUM LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000000096

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000018348

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6PNC0

Identification of Orthologs from Complete Genome Data

More...
OMAi
LRDWHQS

Database of Orthologous Groups

More...
OrthoDBi
127808at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6PNC0

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.130.10.10, 3 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR022033 Rav1p_C
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12234 Rav1p_C, 2 hits
PF00400 WD40, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00320 WD40, 10 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978 SSF50978, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q6PNC0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNLHQVLTGA VNPGDHCFAV GSVGEQRFTA YASGCDIVIL GSNFERLQII
60 70 80 90 100
PGAKHGNIQV GCVDCSMQQG KIAASYGNVI SVFEPVSLPK KRKNLEFYSQ
110 120 130 140 150
WQKSGQFFLD SIAHNITWDP AGNRLLTGSS CLQLWCNSRK QTEDENPDKT
160 170 180 190 200
DLNFGNWMCI WHCKTASQVH LMKFSPDGEF FATAGKDDCL LKVWYNVENW
210 220 230 240 250
RPAVTSPDKN SEKQSQGEID FSFVYLAHPR AVNGFSWRKT SKYMPRASVC
260 270 280 290 300
NVLLTCCKDN VCRLWVETFL PNDCFLYGSD CNHWCEPVSL TNNLKRNASS
310 320 330 340 350
KDRVQSALEV NLRPFRRGRS RSLALVAHTG YLPHQQDPHH AHRNTPLHAN
360 370 380 390 400
ALCHFHIAAS INPATDIPLL PSITSLSLNE NEEKCGPFVV HWLNNKELHF
410 420 430 440 450
TLSMEVFLQQ LRKSFEQPSS EASVEDSIQA DLKSDEELDD GVDDLKINHE
460 470 480 490 500
KKELDEDKML PSSSFTPLSS AAVDHQIEVL LSEWSKNADM LFSIHPMDGS
510 520 530 540 550
LLVWHVDWLD EYQPGMFRQV QVSFVSRIPV AFPTGDANSL CKSIVMYACT
560 570 580 590 600
KNVDLAIQQG KQRPTGLTRS TSMLISSAHS KSSNNLKLSI FTPNVMMISK
610 620 630 640 650
HADGSLNQWL VSFAEESAFS TVLSISHKSR YCGHRFHLND LACHSVLPLL
660 670 680 690 700
LTTSHHNALR TPNVGNQKQA HDAVNTEECS LAQQNKSNVD MAFQDPNAIY
710 720 730 740 750
SELILWRVDP VGPLSFSGGV SELARINSLH VSAFSNVAWL PTLIPSYCLG
760 770 780 790 800
AYCNSPSACF VASDGQYLRL YEAVIDAKKL LYELSNPEIS KYVGEVFNIV
810 820 830 840 850
SQQSTARPGC IIALDSITKL HGRKTQLLHV FQEDFILNNL EKKRLGVDNI
860 870 880 890 900
LLDSDSSCNG FSEKFYLVVI ECTEDNRSLL RMWDLHLRST PVSLDERIDT
910 920 930 940 950
KISEASWLPE EHYSSSPEKI LSPFSQKFQA CRANLQSTSK LSLFSEMVYS
960 970 980 990 1000
KELDLPEGVE IISVKPSAGH LSSSSIYPVC SAPYLLATSC SDDKVRFWRC
1010 1020 1030 1040 1050
RVTNGESATS KNGKLDVVYV WEEWPLLIED GLENNSSVTV PGRPVEVSCA
1060 1070 1080 1090 1100
HTSRLAVAYK QPTGNSRSQE FVMHVSIFEC ESTGGSCWIL EQTIHLDELS
1110 1120 1130 1140 1150
TVLDSGISID SNLVAYNKQE TYLVSKESIT SNTKHLVHLD WMSREDGSHI
1160 1170 1180 1190 1200
LTVGIGSKLF MYGPMAGKVQ DQTGKENQAF PLWDSTKIVP LSKFVLLRSV
1210 1220 1230 1240 1250
DLVSSVEGAP PFPVSLSWVR DGILVVGMDC EMHVYSQWQP SNKQEPVISE
1260 1270 1280 1290 1300
SYNGSTPSIL SLIKQSNSSS SGLHPPKKTL TRSMTSLAQK ICGKKSIFDP
1310 1320 1330 1340 1350
SVDMEDSGLF EAAHVLSPTL PQYHPLQLLE LMDLGKVRRA KAILSHLVKC
1360 1370 1380 1390 1400
IAGEVVALNE AESNHERRLR SLTISASGST TRDPQAFNKA DSRDYTEIDS
1410 1420 1430 1440 1450
VPPLPLYALL AADDDSYCSS LEKTGSESSL KKSKQLSKES YDELFQTSVL
1460 1470 1480 1490 1500
MSDNHMLETD EENTQPRVID LSQYSPTYFG PEHAQVLSGH LLHSSLPGLT
1510 1520 1530 1540 1550
RMEQMSLMAL ADTIATTSTD IGESRDRNQG GETLDECGLK FLLAVRLHTF
1560 1570 1580 1590 1600
LTTSLPAYRA QLLHQGLSTG HFAWAFHSVA EEELLNMLPA MQKDDPTWSE
1610 1620 1630 1640 1650
LRAMGVGWWV RNARILRRCI EKVAKAAFHR NNDPLDAAIF YLAMKKKAVI
1660 1670 1680 1690 1700
WGLYRSQKDT KMTQFFGHNF EEERWRKAAL KNAFSLLGKQ RFEHSAAFFL
1710 1720 1730 1740 1750
LGGCLKDAIE VCLEKLNDIQ LALVIARLFE SEFDKSATYK SILRKKVLGI
1760 1770 1780 1790 1800
GSPASELSSS SINAHHDPFL RSMAHWILED YSAALETLIK QPVTEDEDQV
1810 1820 1830 1840 1850
MMSACNPIVF NFYNYLRTHP LLLRRHFGSS SETFSTHMTL AGKSGLAGTI
1860 1870 1880 1890 1900
NLSERRLFFT TASAHLKAGC PMLALEVLSK MPKVSKKAKP CCRGSSFLTS
1910 1920 1930 1940 1950
KDSSLKLDVR EDKCCAADWS PSLTNGLESS SEGSSERHSH STLSFDWSQP
1960 1970 1980 1990 2000
SVVFQDDSLE LKWDSDNDEE NEDPPISMKE IRPLQRKTVK EIDELSSYTD
2010 2020 2030 2040 2050
SLSTLDENDI LNPSEDIIAV QLKFRACLKI LTVELRTLST GYEIDGGKLR
2060 2070 2080 2090 2100
YQLYHWLEKE VVALQRTCDF CSDADQLQTT FSQSADESGS TEDADDLHHQ
2110 2120 2130 2140 2150
TKVKQLRESF QEKRQWLLKY QSLLRMFLSY CVLHGSHGGG LASVRMELIL
2160 2170 2180 2190 2200
LLQESQQETA EPIFSNPLSE QTSVPLLFAC TASAKTVVAN PLLHLSNLTH
2210 2220 2230 2240 2250
DILHAIINFD SPPHPDSQTN KVYVMHTLAA SLSACIYQCL CGSHNYSSFQ
2260 2270 2280 2290 2300
TNQFTGMVYQ TVLLAHRHSL RTGSLDESVT PNTSPAQWPG INFLIQLLNS
2310 2320 2330 2340 2350
SGEEAQSGLT VLLCEILTAV YLSLFIHGLA THSSNELFRI VAHPLNEKMW
2360 2370 2380 2390 2400
SAVFGGGAHV PSKGQANSKA LSVEGEKQNR HISPSKVSAR ESPVSSSSGN
2410 2420 2430 2440 2450
QEPPAVKEKF VPPELSIWDY FIAKPFLPPS QSRAEYDSEE SLESDDEEEE
2460 2470 2480 2490 2500
DDDDALPSGL QLHEHSNSNS FSWSLMRLAM VQLVLNNLKT FYPFAGHDLA
2510 2520 2530 2540 2550
ELPVSSPLCH AVLKTLQCWE QVLLRRLEIH GGPPQNYISS HTSEENVSAG
2560 2570 2580 2590 2600
PAILRHKALL EPTNTPFKSK NHLALSVKRL WQYLVKQEEI QETFIRNIFT
2610 2620 2630 2640 2650
KKRCLNEIEA DLGYPGGKAR IIHKESDIIT AFAVNRANRN CIAIASSHDV
2660 2670 2680 2690 2700
QELDVSAILA TQIYTWVDDD TETETKGSED FLVIHARDDL SAVQGSTPYT
2710 2720 2730 2740 2750
HSNPGTPINM PWLGSTQTGR GASVMLKKAI NNVRRMTSHP TLPYYLTGAQ
2760 2770 2780 2790 2800
DGSVRMFEWG HSQQITCFRS GGNSRITRMR FNYQGNKFGI VDADGYLSLY
2810 2820 2830 2840 2850
QTNWKCCPVT GSMPKPYLAW QCHNKTANDF VFVSSSSLIA TAGLSSDNRN
2860 2870 2880 2890 2900
ICLWDTLVAP ANSLVHAFTC HDSGATVLAY APKHQLLISG GRKGFTCIFD
2910 2920 2930 2940 2950
LRQRQQRQLF QSHDSPVKAI AIDPTEEYFV TGSAEGNIKI WSLSSFSLLH
2960 2970 2980 2990 3000
TFINEHARQS IFRNIGTGVM QIETGPANHI FSCGADGTMK MRILPDQFSP
3010
LNEVLKNDVK FML
Length:3,013
Mass (Da):336,008
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3C57BD3218EE748D
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F8WGX5F8WGX5_MOUSE
DmX-like protein 1
Dmxl1
3,025Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A286YD42A0A286YD42_MOUSE
DmX-like protein 1
Dmxl1
23Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAE38824 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti2812S → N in BAE38824 (PubMed:16141072).Curated1
Sequence conflicti2944S → L in BAE38824 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY590892 mRNA Translation: AAT01618.1
BC056490 mRNA Translation: AAH56490.1
AK050888 mRNA Translation: BAC34446.1
AK166520 mRNA Translation: BAE38824.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS37816.2

NCBI Reference Sequences

More...
RefSeqi
NP_001074840.2, NM_001081371.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000180611; ENSMUSP00000137871; ENSMUSG00000037416

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
240283

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:240283

UCSC genome browser

More...
UCSCi
uc008ewo.2 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY590892 mRNA Translation: AAT01618.1
BC056490 mRNA Translation: AAH56490.1
AK050888 mRNA Translation: BAC34446.1
AK166520 mRNA Translation: BAE38824.1 Different initiation.
CCDSiCCDS37816.2
RefSeqiNP_001074840.2, NM_001081371.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi232188, 2 interactors
STRINGi10090.ENSMUSP00000045559

PTM databases

iPTMnetiQ6PNC0
PhosphoSitePlusiQ6PNC0

Proteomic databases

EPDiQ6PNC0
jPOSTiQ6PNC0
MaxQBiQ6PNC0
PaxDbiQ6PNC0
PRIDEiQ6PNC0

Genome annotation databases

EnsembliENSMUST00000180611; ENSMUSP00000137871; ENSMUSG00000037416
GeneIDi240283
KEGGimmu:240283
UCSCiuc008ewo.2 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
1657
MGIiMGI:2443926 Dmxl1

Phylogenomic databases

eggNOGiKOG1064 Eukaryota
ENOG410XPUM LUCA
GeneTreeiENSGT00390000000096
HOGENOMiHOG000018348
InParanoidiQ6PNC0
OMAiLRDWHQS
OrthoDBi127808at2759
PhylomeDBiQ6PNC0

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Dmxl1 mouse

Protein Ontology

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PROi
PR:Q6PNC0

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000037416 Expressed in 268 organ(s), highest expression level in spleen
ExpressionAtlasiQ6PNC0 baseline and differential
GenevisibleiQ6PNC0 MM

Family and domain databases

Gene3Di2.130.10.10, 3 hits
InterProiView protein in InterPro
IPR022033 Rav1p_C
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF12234 Rav1p_C, 2 hits
PF00400 WD40, 2 hits
SMARTiView protein in SMART
SM00320 WD40, 10 hits
SUPFAMiSSF50978 SSF50978, 2 hits
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiDMXL1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6PNC0
Secondary accession number(s): Q3TLG8, Q6PHM6, Q8BQF2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: July 5, 2004
Last modified: November 13, 2019
This is version 114 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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