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UniProtKB - Q6PED1 (Q6PED1_RAT)
Protein
C-C motif chemokine
Gene
Ccl5
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- chemokine activity Source: InterPro
GO - Biological processi
- immune response Source: InterPro
Keywordsi
Molecular function | CytokineUniRule annotationARBA annotation |
Biological process | ChemotaxisUniRule annotationARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: C-C motif chemokineUniRule annotation |
Gene namesi | Name:Ccl5Imported ORF Names:rCG_35282Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Organism-specific databases
RGDi | 69069, Ccl5 |
Subcellular locationi
Extracellular region or secreted
- Secreted UniRule annotation
Extracellular region or secreted
- extracellular space Source: UniProtKB-KW
Keywords - Cellular componenti
SecretedUniRule annotationPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 24 | UniRule annotationAdd BLAST | 24 | |
ChainiPRO_5014205953 | 25 – 92 | C-C motif chemokineUniRule annotationAdd BLAST | 68 |
Expressioni
Gene expression databases
Bgeei | ENSRNOG00000010906, Expressed in spleen and 22 other tissues |
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 31 – 89 | SCYInterPro annotationAdd BLAST | 59 |
Sequence similaritiesi
Keywords - Domaini
SignalUniRule annotationPhylogenomic databases
GeneTreei | ENSGT01000000214365 |
HOGENOMi | CLU_141716_4_2_1 |
OMAi | CCFAYLS |
OrthoDBi | 1575018at2759 |
TreeFami | TF334888 |
Family and domain databases
InterProi | View protein in InterPro IPR039809, Chemokine_b/g/d IPR000827, Chemokine_CC_CS IPR001811, Chemokine_IL8-like_dom IPR036048, Interleukin_8-like_sf |
PANTHERi | PTHR12015, PTHR12015, 1 hit |
Pfami | View protein in Pfam PF00048, IL8, 1 hit |
SMARTi | View protein in SMART SM00199, SCY, 1 hit |
SUPFAMi | SSF54117, SSF54117, 1 hit |
PROSITEi | View protein in PROSITE PS00472, SMALL_CYTOKINES_CC, 1 hit |
i Sequence
Sequence statusi: Complete.
Q6PED1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKISTAASLT VILVAAALCT PAPASPYGSD TTPCCFAYLS LALPRAHVKE
60 70 80 90
YFYTSSKCSN LAVVFVTRRN RQVCANPEKK WVQEYINYLE MS
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC058138 mRNA Translation: AAH58138.1 EF121972 mRNA Translation: ABL63411.1 CH473948 Genomic DNA Translation: EDM05488.1 |
RefSeqi | NP_112378.2, NM_031116.3 |
Genome annotation databases
GeneIDi | 81780 |
KEGGi | rno:81780 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC058138 mRNA Translation: AAH58138.1 EF121972 mRNA Translation: ABL63411.1 CH473948 Genomic DNA Translation: EDM05488.1 |
RefSeqi | NP_112378.2, NM_031116.3 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
GeneIDi | 81780 |
KEGGi | rno:81780 |
Organism-specific databases
CTDi | 6352 |
RGDi | 69069, Ccl5 |
Phylogenomic databases
GeneTreei | ENSGT01000000214365 |
HOGENOMi | CLU_141716_4_2_1 |
OMAi | CCFAYLS |
OrthoDBi | 1575018at2759 |
TreeFami | TF334888 |
Gene expression databases
Bgeei | ENSRNOG00000010906, Expressed in spleen and 22 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR039809, Chemokine_b/g/d IPR000827, Chemokine_CC_CS IPR001811, Chemokine_IL8-like_dom IPR036048, Interleukin_8-like_sf |
PANTHERi | PTHR12015, PTHR12015, 1 hit |
Pfami | View protein in Pfam PF00048, IL8, 1 hit |
SMARTi | View protein in SMART SM00199, SCY, 1 hit |
SUPFAMi | SSF54117, SSF54117, 1 hit |
PROSITEi | View protein in PROSITE PS00472, SMALL_CYTOKINES_CC, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | Q6PED1_RAT | |
Accessioni | Q6PED1Primary (citable) accession number: Q6PED1 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 5, 2004 |
Last sequence update: | July 5, 2004 | |
Last modified: | May 25, 2022 | |
This is version 147 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |