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Protein
Submitted name:

Zinc finger and BTB domain-containing 40

Gene

Zbtb40

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and BTB domain-containing 40Imported
Gene namesi
Name:Zbtb40Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:2682254 Zbtb40

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMUSG00000060862 Expressed in 216 organ(s), highest expression level in ear vesicle

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000061899

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 87BTBInterPro annotationAdd BLAST64
Domaini825 – 853C2H2-typeInterPro annotationAdd BLAST29
Domaini854 – 881C2H2-typeInterPro annotationAdd BLAST28
Domaini882 – 910C2H2-typeInterPro annotationAdd BLAST29
Domaini911 – 938C2H2-typeInterPro annotationAdd BLAST28
Domaini939 – 967C2H2-typeInterPro annotationAdd BLAST29
Domaini969 – 997C2H2-typeInterPro annotationAdd BLAST29
Domaini997 – 1024C2H2-typeInterPro annotationAdd BLAST28
Domaini1025 – 1047C2H2-typeInterPro annotationAdd BLAST23
Domaini1065 – 1093C2H2-typeInterPro annotationAdd BLAST29
Domaini1094 – 1122C2H2-typeInterPro annotationAdd BLAST29
Domaini1154 – 1177C2H2-typeInterPro annotationAdd BLAST24

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000151052
HOGENOMiHOG000143421
HOVERGENiHBG058697
KOiK10512
OrthoDBiEOG091G00OM
TreeFamiTF350897

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR030404 ZBTB40
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR24394:SF0 PTHR24394:SF0, 1 hit
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 6 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 10 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q6PCS8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MELPSYSQQL LLQLYALCKE QRFCDCTISV GNIYFRAHKP VLAAASLLFK
60 70 80 90 100
TLLDSTDAIS IDASVVSPEE FALLLEMTYT GKLPVGKHNF SKIISLADSL
110 120 130 140 150
QMFDVAVSCK NLLTNLVNCS VQGQVVRDVS VLSSEAGNKE SEKPQVEALS
160 170 180 190 200
SEGAEEPSSS PEVSAVPAGP EKAKTQDVIN IATQEINADP PVAQEVQVAA
210 220 230 240 250
EITGATPHTA EVCSPSPVGQ IPSETKEVNT EAECETKQDQ LTLLLEHESV
260 270 280 290 300
FSDAALLTPD TLRRLAGCSE IEGPQKETII ECLTSEGGSS AFQRILDKVH
310 320 330 340 350
DGSLDVQVAL SLVRLYQEST PAEKVSQIQP EGSAGEGKTL SVLLLEHKED
360 370 380 390 400
LIQCVTQLRP IVEFLETAKE EFLPDSEKRV IQSCCEGRTP KEMIENLLHR
410 420 430 440 450
VTEEKTLPAK SLVKLLQAVR TAFPNLDLLL DNLQKGAGSA GTTGLARVSC
460 470 480 490 500
ESEWTDEPRP VCIPADRVDG SSPSPDAYGA ELLRKYHENL SEILIDNQVL
510 520 530 540 550
LKVISRMQSL APGDREVMQT LVKQGSGSGG FSSLMLAALE RQTLSATAIW
560 570 580 590 600
QLLLAVEETE TRPLNLLLEE VGKEPGAGAF FRAVTAPEST VLEAILRHSK
610 620 630 640 650
LLREAIQQTA GCERLSSEEE HLAETVQEML SISSETVSPE ASLRAVLSKA
660 670 680 690 700
MEKSVSASVV CHLLCSVHKS FPGLQPLMQE LAHVGFLTKE SGEERWKVTD
710 720 730 740 750
GLHPGAKDKV EEVAKATGED CQANEQKEQG EPGPVPEQPE KDTSASPDSA
760 770 780 790 800
KKSFVCKACD KSFHFYCRLK VHMKRCRVAK SRQVQSEEGS ETKGSEKGLE
810 820 830 840 850
KQQPDARGTG GEPDAPKKKK KRLPVTCDLC GREFAHASGM QYHKLTEHFD
860 870 880 890 900
EKPFSCEECG AKFAANSTLK NHLRLHTGDR PFMCKHCLMT FTQASALAYH
910 920 930 940 950
TKKKHSEGKM YACQYCDAVF AQSIELSRHV RTHTGDKPYV CRDCGKGFRQ
960 970 980 990 1000
ANGLSIHLHT FHTDIEDPYD CKKCRMSFST LQDHRKHIHE VHAKEYHPCP
1010 1020 1030 1040 1050
TCGKIFSAPS MLERHMVTHV GGKPFSCGIC NKAYQQLSGL WYHNRTHHPD
1060 1070 1080 1090 1100
VFAAQNHRSP KFSSLQCSSC DKTFSNTVEH KKHIKTEHTD VKFHECDQCK
1110 1120 1130 1140 1150
ELFPTPALLQ VHVKCQHSGS QPFRCLYCAA TFRFPGALQH HVTTEHFKQS
1160 1170 1180 1190 1200
ESTFPCELCG ELFTSQAQLD SHLESEHPKV AGTESQAAAS RMVQVIRAPE
1210 1220 1230 1240 1250
PAAPAEQVIT LEETQLAGSQ VFVTLPDSQT SQNSSELVAV TVEDLLDGTV

TLICGEAK
Length:1,258
Mass (Da):138,167
Last modified:July 5, 2004 - v1
Checksum:i469EA921CEE4B821
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1W2P800A0A1W2P800_MOUSE
Zinc finger and BTB domain-containi...
Zbtb40
269Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627214 Genomic DNA No translation available.
AL671011 Genomic DNA No translation available.
BC059177 mRNA Translation: AAH59177.1
RefSeqiNP_937891.1, NM_198248.1
UniGeneiMm.31068

Genome annotation databases

EnsembliENSMUST00000049583; ENSMUSP00000061899; ENSMUSG00000060862
GeneIDi230848
KEGGimmu:230848
UCSCiuc008vit.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627214 Genomic DNA No translation available.
AL671011 Genomic DNA No translation available.
BC059177 mRNA Translation: AAH59177.1
RefSeqiNP_937891.1, NM_198248.1
UniGeneiMm.31068

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000061899

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000049583; ENSMUSP00000061899; ENSMUSG00000060862
GeneIDi230848
KEGGimmu:230848
UCSCiuc008vit.1 mouse

Organism-specific databases

CTDi9923
MGIiMGI:2682254 Zbtb40

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000151052
HOGENOMiHOG000143421
HOVERGENiHBG058697
KOiK10512
OrthoDBiEOG091G00OM
TreeFamiTF350897

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000060862 Expressed in 216 organ(s), highest expression level in ear vesicle

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR030404 ZBTB40
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR24394:SF0 PTHR24394:SF0, 1 hit
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 6 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 10 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ6PCS8_MOUSE
AccessioniPrimary (citable) accession number: Q6PCS8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 7, 2018
This is version 141 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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