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Entry version 141 (16 Oct 2019)
Sequence version 2 (02 Nov 2010)
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Protein

Zinc finger protein 549

Gene

ZNF549

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri217 – 241C2H2-type 1; degeneratePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri247 – 269C2H2-type 2; degeneratePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri275 – 298C2H2-type 3PROSITE-ProRule annotationAdd BLAST24
Zinc fingeri304 – 326C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri332 – 355C2H2-type 5PROSITE-ProRule annotationAdd BLAST24
Zinc fingeri361 – 383C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri389 – 411C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri417 – 439C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri445 – 467C2H2-type 9PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri473 – 495C2H2-type 10PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri501 – 523C2H2-type 11PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri529 – 551C2H2-type 12PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri557 – 579C2H2-type 13PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri585 – 607C2H2-type 14PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri613 – 635C2H2-type 15PROSITE-ProRule annotationAdd BLAST23

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-HSA-212436 Generic Transcription Pathway

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Zinc finger protein 549
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ZNF549
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:26632 ZNF549

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q6P9A3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA134905435

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q6P9A3

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
ZNF549

Domain mapping of disease mutations (DMDM)

More...
DMDMi
311033505

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002345831 – 640Zinc finger protein 549Add BLAST640

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section describes <strong>covalent linkages</strong> of various types formed <strong>between two proteins (interchain cross-links)</strong> or <strong>between two parts of the same protein (intrachain cross-links)</strong>, except the disulfide bonds that are annotated in the <a href="http://www.uniprot.org/manual/disulfid">'Disulfide bond'</a> subsection.<p><a href='/help/crosslnk' target='_top'>More...</a></p>Cross-linki223Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources

Keywords - PTMi

Isopeptide bond, Ubl conjugation

Proteomic databases

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q6P9A3

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q6P9A3

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6P9A3

PeptideAtlas

More...
PeptideAtlasi
Q6P9A3

PRoteomics IDEntifications database

More...
PRIDEi
Q6P9A3

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
67033 [Q6P9A3-1]
67034 [Q6P9A3-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6P9A3

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6P9A3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000121406 Expressed in 97 organ(s), highest expression level in right hemisphere of cerebellum

ExpressionAtlas, Differential and Baseline Expression

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ExpressionAtlasi
Q6P9A3 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q6P9A3 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA039511

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
129133, 1 interactor

Protein interaction database and analysis system

More...
IntActi
Q6P9A3, 2 interactors

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000365407

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q6P9A3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini27 – 140KRABPROSITE-ProRule annotationAdd BLAST114

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri217 – 241C2H2-type 1; degeneratePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri247 – 269C2H2-type 2; degeneratePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri275 – 298C2H2-type 3PROSITE-ProRule annotationAdd BLAST24
Zinc fingeri304 – 326C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri332 – 355C2H2-type 5PROSITE-ProRule annotationAdd BLAST24
Zinc fingeri361 – 383C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri389 – 411C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri417 – 439C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri445 – 467C2H2-type 9PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri473 – 495C2H2-type 10PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri501 – 523C2H2-type 11PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri529 – 551C2H2-type 12PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri557 – 579C2H2-type 13PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri585 – 607C2H2-type 14PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri613 – 635C2H2-type 15PROSITE-ProRule annotationAdd BLAST23

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1721 Eukaryota
COG5048 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000164088

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000234617

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6P9A3

KEGG Orthology (KO)

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KOi
K09228

Identification of Orthologs from Complete Genome Data

More...
OMAi
TEQQSAH

Database of Orthologous Groups

More...
OrthoDBi
1318335at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6P9A3

TreeFam database of animal gene trees

More...
TreeFami
TF339848

Family and domain databases

Conserved Domains Database

More...
CDDi
cd07765 KRAB_A-box, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 11 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 15 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 8 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 13 hits
PS50157 ZINC_FINGER_C2H2_2, 15 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q6P9A3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAEAALVITP QIPMVTEEFV KPSQGHVTFE DIAVYFSQEE WGLLDEAQRC
60 70 80 90 100
LYHDVMLENF SLMASVGCLH GIEAEEAPSE QTLSAQGVSQ ARTPKLGPSI
110 120 130 140 150
PNAHSCEMCI LVMKDILYLS EHQGTLPWQK PYTSVASGKW FSFGSNLQQH
160 170 180 190 200
QNQDSGEKHI RKEESSALLL NSCKIPLSDN LFPCKDVEKD FPTILGLLQH
210 220 230 240 250
QTTHSRQEYA HRSRETFQQR RYKCEQVFNE KVHVTEHQRV HTGEKAYKRR
260 270 280 290 300
EYGKSLNSKY LFVEHQRTHN AEKPYVCNIC GKSFLHKQTL VGHQQRIHTR
310 320 330 340 350
ERSYVCIECG KSLSSKYSLV EHQRTHNGEK PYVCNVCGKS FRHKQTFVGH
360 370 380 390 400
QQRIHTGERP YVCMECGKSF IHSYDRIRHQ RVHTGEGAYQ CSECGKSFIY
410 420 430 440 450
KQSLLDHHRI HTGERPYECK ECGKAFIHKK RLLEHQRIHT GEKPYVCIIC
460 470 480 490 500
GKSFIRSSDY MRHQRIHTGE RAYECSDCGK AFISKQTLLK HHKIHTRERP
510 520 530 540 550
YECSECGKGF YLEVKLLQHQ RIHTREQLCE CNECGKVFSH QKRLLEHQKV
560 570 580 590 600
HTGEKPCECS ECGKCFRHRT SLIQHQKVHS GERPYNCTAC EKAFIYKNKL
610 620 630 640
VEHQRIHTGE KPYECGKCGK AFNKRYSLVR HQKVHITEEP
Length:640
Mass (Da):74,439
Last modified:November 2, 2010 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iCED338B5CC75DD97
GO
Isoform 2 (identifier: Q6P9A3-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     12-24: Missing.

Note: No experimental confirmation available.
Show »
Length:627
Mass (Da):72,952
Checksum:i3CC79CEECD2272C7
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
M0QXN3M0QXN3_HUMAN
Zinc finger protein 549
ZNF549
104Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
M0R0L6M0R0L6_HUMAN
Zinc finger protein 549
ZNF549
13Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAC24605 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti84S → P in BAC03834 (PubMed:14702039).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_0599218I → N. Corresponds to variant dbSNP:rs12461014Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_01837912 – 24Missing in isoform 2. 1 PublicationAdd BLAST13

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK092236 mRNA Translation: BAC03834.1
AK122749 mRNA Translation: BAG53703.1
AC003682 Genomic DNA Translation: AAC24605.1 Sequence problems.
CH471135 Genomic DNA Translation: EAW72511.1
BC060863 mRNA Translation: AAH60863.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS12952.1 [Q6P9A3-2]
CCDS56106.1 [Q6P9A3-1]

NCBI Reference Sequences

More...
RefSeqi
NP_001186224.1, NM_001199295.1 [Q6P9A3-1]
NP_694995.2, NM_153263.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000240719; ENSP00000240719; ENSG00000121406 [Q6P9A3-2]
ENST00000376233; ENSP00000365407; ENSG00000121406 [Q6P9A3-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
256051

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:256051

UCSC genome browser

More...
UCSCi
uc002qpa.3 human [Q6P9A3-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK092236 mRNA Translation: BAC03834.1
AK122749 mRNA Translation: BAG53703.1
AC003682 Genomic DNA Translation: AAC24605.1 Sequence problems.
CH471135 Genomic DNA Translation: EAW72511.1
BC060863 mRNA Translation: AAH60863.1
CCDSiCCDS12952.1 [Q6P9A3-2]
CCDS56106.1 [Q6P9A3-1]
RefSeqiNP_001186224.1, NM_001199295.1 [Q6P9A3-1]
NP_694995.2, NM_153263.2

3D structure databases

SMRiQ6P9A3
ModBaseiSearch...

Protein-protein interaction databases

BioGridi129133, 1 interactor
IntActiQ6P9A3, 2 interactors
STRINGi9606.ENSP00000365407

PTM databases

iPTMnetiQ6P9A3
PhosphoSitePlusiQ6P9A3

Polymorphism and mutation databases

BioMutaiZNF549
DMDMi311033505

Proteomic databases

MassIVEiQ6P9A3
MaxQBiQ6P9A3
PaxDbiQ6P9A3
PeptideAtlasiQ6P9A3
PRIDEiQ6P9A3
ProteomicsDBi67033 [Q6P9A3-1]
67034 [Q6P9A3-2]

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
256051

Genome annotation databases

EnsembliENST00000240719; ENSP00000240719; ENSG00000121406 [Q6P9A3-2]
ENST00000376233; ENSP00000365407; ENSG00000121406 [Q6P9A3-1]
GeneIDi256051
KEGGihsa:256051
UCSCiuc002qpa.3 human [Q6P9A3-1]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
256051

GeneCards: human genes, protein and diseases

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GeneCardsi
ZNF549
HGNCiHGNC:26632 ZNF549
HPAiHPA039511
neXtProtiNX_Q6P9A3
PharmGKBiPA134905435

GenAtlas: human gene database

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GenAtlasi
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Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00940000164088
HOGENOMiHOG000234617
InParanoidiQ6P9A3
KOiK09228
OMAiTEQQSAH
OrthoDBi1318335at2759
PhylomeDBiQ6P9A3
TreeFamiTF339848

Enzyme and pathway databases

ReactomeiR-HSA-212436 Generic Transcription Pathway

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
ZNF549 human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
256051
PharosiQ6P9A3

Protein Ontology

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PROi
PR:Q6P9A3

Gene expression databases

BgeeiENSG00000121406 Expressed in 97 organ(s), highest expression level in right hemisphere of cerebellum
ExpressionAtlasiQ6P9A3 baseline and differential
GenevisibleiQ6P9A3 HS

Family and domain databases

CDDicd07765 KRAB_A-box, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 11 hits
SMARTiView protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 15 hits
SUPFAMiSSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 8 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 13 hits
PS50157 ZINC_FINGER_C2H2_2, 15 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiZN549_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6P9A3
Secondary accession number(s): B3KV91, O43336, Q8NAR4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: November 2, 2010
Last modified: October 16, 2019
This is version 141 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  3. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  4. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
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