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Protein
Submitted name:

Troponin C type 2 (Fast)

Gene

tnnc2

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Calcium bindingi29 – 40PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi65 – 76PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi105 – 116PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi141 – 152PROSITE-ProRule annotationAdd BLAST12

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumPROSITE-ProRule annotation

Enzyme and pathway databases

ReactomeiR-XTR-390522 Striated Muscle Contraction

Names & Taxonomyi

Protein namesi
Submitted name:
Troponin C type 2 (Fast)Imported
Submitted name:
Troponin C2, fastImported
Submitted name:
Troponin C2, fast skeletal typeImported
Gene namesi
Name:tnnc2Imported
ORF Names:TTpA010p04.1-001Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-480259 tnnc2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSXETG00000014877 Expressed in 18 organ(s), highest expression level in skeletal muscle tissue

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000032547

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 51EF-handInterPro annotationAdd BLAST36
Domaini52 – 87EF-handInterPro annotationAdd BLAST36
Domaini92 – 127EF-handInterPro annotationAdd BLAST36
Domaini128 – 161EF-handInterPro annotationAdd BLAST34

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
GeneTreeiENSGT00760000118901
HOGENOMiHOG000233018
HOVERGENiHBG012180
KOiK12042
OMAiVETWEVD
OrthoDBiEOG091G0QHM
TreeFamiTF318191

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
PfamiView protein in Pfam
PF13499 EF-hand_7, 1 hit
PF13833 EF-hand_8, 1 hit
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 4 hits
PS50222 EF_HAND_2, 4 hits

Sequencei

Sequence statusi: Complete.

Q6P8E2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPTDQQQDAR SFLSEEMIAE FKAAFDMFDT DGGGDISTKE LGTVMRMLGQ
60 70 80 90 100
NPTKEELDAI IEEVDEDGSG TIDFEEFLVM MVRQMKEDAQ GKSEEELAEC
110 120 130 140 150
FRIFDKNADG YIDGEELAEI LRSSGESITD EEIEELMKDG DKNNDGKIDF
160
DEFLKMMEGV Q
Length:161
Mass (Da):18,183
Last modified:July 5, 2004 - v1
Checksum:iF5BE4EF6C3E5F14B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01013918 Genomic DNA No translation available.
BC061286 mRNA Translation: AAH61286.1
CR760837 mRNA Translation: CAJ82944.1
RefSeqiNP_988957.1, NM_203626.2
UniGeneiStr.5631

Genome annotation databases

EnsembliENSXETT00000032547; ENSXETP00000032547; ENSXETG00000014877
GeneIDi394554
KEGGixtr:394554

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01013918 Genomic DNA No translation available.
BC061286 mRNA Translation: AAH61286.1
CR760837 mRNA Translation: CAJ82944.1
RefSeqiNP_988957.1, NM_203626.2
UniGeneiStr.5631

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000032547

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000032547; ENSXETP00000032547; ENSXETG00000014877
GeneIDi394554
KEGGixtr:394554

Organism-specific databases

CTDi7125
XenbaseiXB-GENE-480259 tnnc2

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
GeneTreeiENSGT00760000118901
HOGENOMiHOG000233018
HOVERGENiHBG012180
KOiK12042
OMAiVETWEVD
OrthoDBiEOG091G0QHM
TreeFamiTF318191

Enzyme and pathway databases

ReactomeiR-XTR-390522 Striated Muscle Contraction

Gene expression databases

BgeeiENSXETG00000014877 Expressed in 18 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
PfamiView protein in Pfam
PF13499 EF-hand_7, 1 hit
PF13833 EF-hand_8, 1 hit
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 4 hits
PS50222 EF_HAND_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ6P8E2_XENTR
AccessioniPrimary (citable) accession number: Q6P8E2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 12, 2018
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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