UniProtKB - Q6P5B0 (RRP12_MOUSE)
Protein
RRP12-like protein
Gene
Rrp12
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Recommended name: RRP12-like protein |
Gene namesi | Name:Rrp12 Synonyms:Kiaa0690 |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:2147437, Rrp12 |
Subcellular locationi
Nucleus
- nucleolus By similarity
- Nucleus membrane By similarity; Single-pass membrane protein By similarity
Cytosol
- cytosol Source: MGI
Nucleus
- nuclear membrane Source: UniProtKB-SubCell
- nucleolus Source: MGI
Plasma Membrane
- plasma membrane Source: MGI
Other locations
- integral component of membrane Source: UniProtKB-KW
- intracellular membrane-bounded organelle Source: MGI
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 904 – 924 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
Membrane, NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000050769 | 1 – 1295 | RRP12-like proteinAdd BLAST | 1295 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 49 | PhosphoserineBy similarity | 1 | |
Cross-linki | 71 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)By similarity | ||
Modified residuei | 72 | PhosphoserineBy similarity | 1 | |
Modified residuei | 77 | PhosphothreonineBy similarity | 1 | |
Modified residuei | 88 | PhosphothreonineBy similarity | 1 | |
Modified residuei | 97 | PhosphoserineBy similarity | 1 | |
Modified residuei | 1050 | PhosphoserineBy similarity | 1 | |
Modified residuei | 1073 | PhosphoserineBy similarity | 1 | |
Modified residuei | 1081 | PhosphoserineCombined sources | 1 |
Keywords - PTMi
Isopeptide bond, Phosphoprotein, Ubl conjugationProteomic databases
EPDi | Q6P5B0 |
jPOSTi | Q6P5B0 |
MaxQBi | Q6P5B0 |
PaxDbi | Q6P5B0 |
PRIDEi | Q6P5B0 |
PTM databases
iPTMneti | Q6P5B0 |
PhosphoSitePlusi | Q6P5B0 |
SwissPalmi | Q6P5B0 |
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000035049, Expressed in ear and 273 other tissues |
ExpressionAtlasi | Q6P5B0, baseline and differential |
Genevisiblei | Q6P5B0, MM |
Interactioni
Protein-protein interaction databases
BioGRIDi | 223201, 21 interactors |
IntActi | Q6P5B0, 1 interactor |
STRINGi | 10090.ENSMUSP00000039853 |
Miscellaneous databases
RNActi | Q6P5B0, protein |
Family & Domainsi
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1055 – 1089 | Glu-richAdd BLAST | 35 |
Sequence similaritiesi
Belongs to the RRP12 family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG1248, Eukaryota |
GeneTreei | ENSGT00390000013106 |
HOGENOMi | CLU_003753_0_0_1 |
InParanoidi | Q6P5B0 |
OMAi | TLMDLVI |
OrthoDBi | 833555at2759 |
PhylomeDBi | Q6P5B0 |
TreeFami | TF300780 |
Family and domain databases
Gene3Di | 1.25.10.10, 1 hit |
InterProi | View protein in InterPro IPR011989, ARM-like IPR016024, ARM-type_fold IPR012978, Uncharacterised_NUC173 |
Pfami | View protein in Pfam PF08161, NUC173, 1 hit |
SUPFAMi | SSF48371, SSF48371, 1 hit |
i Sequence
Sequence statusi: Complete.
Q6P5B0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGRSGKLPSG VSAKLKRWKK GHSSDSNPAT CRHRQAARSR FFSRPSGKSD
60 70 80 90 100
LTVDAVKLHN ELQSGTLSLG KSQAPETTMD QDPEVAFTEK SSGTFLSGLS
110 120 130 140 150
DCTNVTFSKV QRFWESNSAA HKEICAVLAA VTEVIRSQGG KETETEYFAA
160 170 180 190 200
LMTTMEAVES PESLAAVAYL LNLVLKRVPS PVLMKKFSDT SKAFMDIMSA
210 220 230 240 250
QASSGSTSAL RWVLSCLAIL LRKQDLEAWG YPITLQVYHG LLSFTVHAKP
260 270 280 290 300
KIRKAAQHGV CSVLKGSDFM FGEKAPAHHP AAVSTAKFCI QEIEKSGGSK
310 320 330 340 350
EATTTLHMLT LLKDMLPCFP EGLVKSCSET LLRVMTLNHV LVTACAMQAF
360 370 380 390 400
HNLFHAKPSP STLSAELNAQ IVTALYDYVP SENDLQPLLA WLKVMEKAHI
410 420 430 440 450
NLVRLQRDLG LGHLARFFGT AVTCLLSPHS QVAAAATQTL KEILKECVAP
460 470 480 490 500
HIADIGSVTS SASGPPQYIT KMFRAVEEGL TYKFHAAWSS VLQLLGVFFE
510 520 530 540 550
ACGKQAHPVM KKCLQSLCDL RLSPHFPHTA ALDQAVGAAV TSMGPEVVLQ
560 570 580 590 600
AVPLEIDGSE ETLDFPRSWL LPVIRDHVRE TRLGFFTTYF LPLATTLKRK
610 620 630 640 650
AMDLAQAGST VESKIYDTLQ WQIWTLLPGF CTRPTDVAAS FKGLARTLGT
660 670 680 690 700
AINERPDLRV TVCQALRTLI TKGCEAEADR AEVSRFAKNF LPILFNLYGQ
710 720 730 740 750
PVAAGEAAAP RRAVLETIKT YLTITEAQLV NSFLEKATEK VLDPASSDFT
760 770 780 790 800
RLSVLDLVVA LAPYSDEAAI SKLYSTIRPY LESKVHGVQK KAYRVLEEVC
810 820 830 840 850
ASSQGPAARF VQSHLDDLKK TLLDSLRTTS SPAKRPRLKC LIHIVKTLSA
860 870 880 890 900
EHEEFIAALI PEVILCTKEV SVGARKSAFT LLVEMGHAFL RFGSNQEDAL
910 920 930 940 950
QRYLVLIYPG LLGAVTTVSC SILALTHLLF EFKGLMGTST VEQLLENVCL
960 970 980 990 1000
LLASRTRDVV KSALGFIKVA VVVMDVVHLA KHVQLVMEAI GKLSDDMRRH
1010 1020 1030 1040 1050
FRMKLRNLFI KFTRKFGFEL VKGLLPAEYH KVLINIRKAE TRAKKHRALS
1060 1070 1080 1090 1100
QAAVEEEEEE EEEEEPVQSK GDSIEEILAD SEDEDEEEER GRGKEQRKLA
1110 1120 1130 1140 1150
RQRSRAWLKE GGGDEPLNFL DPKVAHRVLA TQPGPGRGKK RDHGFKLSAD
1160 1170 1180 1190 1200
GRLIIREEED GNKVEEEDGT KGEDEDMTDA MEDASVRSKK KLKRQREDEE
1210 1220 1230 1240 1250
DELEIPPRYQ AGGSGIHRPV AKKAAPGAEY KAKKAKGDVK KKGRLDPYAY
1260 1270 1280 1290
VPLNRSKLNR RKKVKLQGQF KGLVKATQRG SQAGHKLRRK DRRRP
Sequence cautioni
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 706 | E → G in AAH56232 (PubMed:15489334).Curated | 1 | |
Sequence conflicti | 732 | S → G in BAC65628 (PubMed:12693553).Curated | 1 | |
Sequence conflicti | 732 | S → G in AAH56232 (PubMed:15489334).Curated | 1 | |
Sequence conflicti | 1050 | S → N in AAH56232 (PubMed:15489334).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AK122346 mRNA Translation: BAC65628.3 Sequence problems. BC056232 mRNA Translation: AAH56232.1 BC062977 mRNA Translation: AAH62977.1 |
CCDSi | CCDS29814.1 |
RefSeqi | NP_955518.1, NM_199447.2 |
Genome annotation databases
Ensembli | ENSMUST00000038677; ENSMUSP00000039853; ENSMUSG00000035049 |
GeneIDi | 107094 |
KEGGi | mmu:107094 |
UCSCi | uc008hmk.1, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AK122346 mRNA Translation: BAC65628.3 Sequence problems. BC056232 mRNA Translation: AAH56232.1 BC062977 mRNA Translation: AAH62977.1 |
CCDSi | CCDS29814.1 |
RefSeqi | NP_955518.1, NM_199447.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 223201, 21 interactors |
IntActi | Q6P5B0, 1 interactor |
STRINGi | 10090.ENSMUSP00000039853 |
PTM databases
iPTMneti | Q6P5B0 |
PhosphoSitePlusi | Q6P5B0 |
SwissPalmi | Q6P5B0 |
Proteomic databases
EPDi | Q6P5B0 |
jPOSTi | Q6P5B0 |
MaxQBi | Q6P5B0 |
PaxDbi | Q6P5B0 |
PRIDEi | Q6P5B0 |
Protocols and materials databases
Antibodypediai | 30844, 56 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000038677; ENSMUSP00000039853; ENSMUSG00000035049 |
GeneIDi | 107094 |
KEGGi | mmu:107094 |
UCSCi | uc008hmk.1, mouse |
Organism-specific databases
CTDi | 23223 |
MGIi | MGI:2147437, Rrp12 |
Rougei | Search... |
Phylogenomic databases
eggNOGi | KOG1248, Eukaryota |
GeneTreei | ENSGT00390000013106 |
HOGENOMi | CLU_003753_0_0_1 |
InParanoidi | Q6P5B0 |
OMAi | TLMDLVI |
OrthoDBi | 833555at2759 |
PhylomeDBi | Q6P5B0 |
TreeFami | TF300780 |
Miscellaneous databases
BioGRID-ORCSi | 107094, 8 hits in 18 CRISPR screens |
ChiTaRSi | Rrp12, mouse |
PROi | PR:Q6P5B0 |
RNActi | Q6P5B0, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000035049, Expressed in ear and 273 other tissues |
ExpressionAtlasi | Q6P5B0, baseline and differential |
Genevisiblei | Q6P5B0, MM |
Family and domain databases
Gene3Di | 1.25.10.10, 1 hit |
InterProi | View protein in InterPro IPR011989, ARM-like IPR016024, ARM-type_fold IPR012978, Uncharacterised_NUC173 |
Pfami | View protein in Pfam PF08161, NUC173, 1 hit |
SUPFAMi | SSF48371, SSF48371, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RRP12_MOUSE | |
Accessioni | Q6P5B0Primary (citable) accession number: Q6P5B0 Secondary accession number(s): Q7TMI5, Q80TU2 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 19, 2005 |
Last sequence update: | July 5, 2004 | |
Last modified: | December 2, 2020 | |
This is version 132 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot - SIMILARITY comments
Index of protein domains and families