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Entry version 113 (07 Oct 2020)
Sequence version 2 (19 Sep 2006)
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Protein

Autophagy-related protein 2 homolog A

Gene

Atg2a

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in autophagosome assembly, regulating the size of nascent autophagosomes. Also regulates lipid droplets morphology and distribution within the cell (By similarity). Tethers the edge of the isolation membrane (IM) to the endoplasmic reticulum (ER) and mediates direct lipid transfer from ER to IM for IM expansion (By similarity).By similarity
(Microbial infection) Mediates the intracellular lifestyle of Cryptococcus neoformans by supporting infection.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processAutophagy

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Autophagy-related protein 2 homolog A
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Atg2a
Synonyms:Kiaa0404
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1916291, Atg2a

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Endoplasmic reticulum, Lipid droplet, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003152351 – 1914Autophagy-related protein 2 homolog AAdd BLAST1914

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei764PhosphoserineBy similarity1
Modified residuei869PhosphoserineCombined sources1
Modified residuei875PhosphoserineCombined sources1
Modified residuei877PhosphoserineCombined sources1
Modified residuei1246PhosphoserineCombined sources1
Modified residuei1282PhosphoserineBy similarity1
Modified residuei1290PhosphoserineBy similarity1
Modified residuei1381PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q6P4T0

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q6P4T0

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6P4T0

PRoteomics IDEntifications database

More...
PRIDEi
Q6P4T0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6P4T0

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6P4T0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000024773, Expressed in embryo and 221 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q6P4T0, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q6P4T0, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with WDR45.

By similarity

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
236694, 5 interactors

Protein interaction database and analysis system

More...
IntActi
Q6P4T0, 2 interactors

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000046412

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q6P4T0, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q6P4T0

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ATG2 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2993, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00620000087966

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001781_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6P4T0

KEGG Orthology (KO)

More...
KOi
K17906

Identification of Orthologs from Complete Genome Data

More...
OMAi
INKFLYH

Database of Orthologous Groups

More...
OrthoDBi
196897at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6P4T0

TreeFam database of animal gene trees

More...
TreeFami
TF313482

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR026849, ATG2
IPR015412, Autophagy-rel_C
IPR026854, VPS13-like_N

The PANTHER Classification System

More...
PANTHERi
PTHR13190, PTHR13190, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF09333, ATG_C, 1 hit
PF12624, Chorein_N, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q6P4T0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRWLWPWSN CVKERVCRYL LQHYLGHFFQ EHLSLDQLSL DLYKGSVALR
60 70 80 90 100
DIHLETWSVN EFLRSMESPL ELVEGFVSSI EVAVPWAALL TDHCTVCVSG
110 120 130 140 150
LQLTLQPRQG SGPGAADSQS WASCMTTSLQ LAQECLREGL PEPSEPPQPL
160 170 180 190 200
EGLEMFAQTI ETVLRRIKVT FLNTVVRVEH SLGDEDRSVA VEVRVQRLEY
210 220 230 240 250
CDEAVRDPSQ APPVDVHQPP AFLHKLLQLS GVCLYFEELP SQADPPQPPL
260 270 280 290 300
QIGSCTGYVE LMVRLKQNEA FPGPKLEVSG QLGSLHLLLT PRQLQQLQRL
310 320 330 340 350
LSAVNLADPA GLADKLNKSR PLGAEDLWLI EQDLNQQLQA GAVAESLSLY
360 370 380 390 400
PITNPLNLDS TDLFFSMAGL TSSVTSAVSE LSVYSVDLGS SVHSNMAFHR
410 420 430 440 450
PSTPPHSGGK MAPTPLLDTT RPDSLVKMTL GGVSLTLLQT ASPSSGPSDL
460 470 480 490 500
PTHFFAEFDA AKDGPFGSRD FSHLRPRFQR ACPCSHVRLT GTAVQLSWEL
510 520 530 540 550
RTGSHSRRTS STEVHFGQLE VLECLWPRAA TEPEYTEILS FPSHSGSEAS
560 570 580 590 600
ARPCAHLRHT QTIRRVLKSR SRRSTACHCH SELSLDLADF QSDVELGSLD
610 620 630 640 650
RLAALFRQVT TPSEPPAGLL TEPPQATELQ TVFRLSAPRA TLRLRFPIPD
660 670 680 690 700
LRPDRDPWAG QAVRAEQLRL ELSEPQFRSE LNSGPGPPAP TRLELTCSDL
710 720 730 740 750
QGIYEDGEKP PVPCLRVSKA LNPRSTEAKY FLPQVVVTLN PQSSGTQWET
760 770 780 790 800
AYEKGRDLEL STESPCELQQ PEPSPFSSKR TMYETEEMVI PGDPEEMRTF
810 820 830 840 850
QSRTLALSRC TLDVIMPSAH IFLPSKEVYE SIYNRINNDL LMWEPADLLP
860 870 880 890 900
TSSAAARPPG SSGFKMCKSA FKLDSDSDEE DAQFFSMASG VPQTPAPEPS
910 920 930 940 950
RRQSQSTFST LVTVLKGRIT ALCEAKDETG KRLDVTHGEL VLDVEQGTIF
960 970 980 990 1000
SVAQYRGQPG LGYFCLEAEK AKLYHRAAIE DYLLPTHLEV PSFAPPAQLA
1010 1020 1030 1040 1050
PTIYPSEEGV TERGTLGRKG QGPPMLSAAV RIHLDPHKNV KEFLVTVRLH
1060 1070 1080 1090 1100
KATLRHYMAP PEQSWHSQLL DFLDVLDDPV LGYLPPTVIT VLHTHLFSCA
1110 1120 1130 1140 1150
VDYRPLYLPV RVLVTAETFT LSSNIVMDTS TFLLRFILDD SALYLSDKCE
1160 1170 1180 1190 1200
VESLDLRRDY VCVLDIDLLE LVIKTWKGST EGRLSQPLFE LRCSNNVVHV
1210 1220 1230 1240 1250
HSCADSCALL VNLLQYLTSS GDLHPPPRPP SPTEIAGQKL SESPASLPSC
1260 1270 1280 1290 1300
LPVETALINQ RDLTDALLDT ERRGLQELAQ SSGGPLPQAS PVSVYLFPGE
1310 1320 1330 1340 1350
RSGAQAPLPP PGASSHTLGS KAKEHENEEE GDGDTLDSDE FCILDAPGLG
1360 1370 1380 1390 1400
IAPRDGEPIV TQLHPGPIIV HDGHFSQPLG STDLLRAPAH FPVPSSRVVL
1410 1420 1430 1440 1450
REVSFIWHLY GGRDFGLHPT YRARVGLTGP RVSPSRSSGP NRPQNSWRTQ
1460 1470 1480 1490 1500
GGIGRQHQVL MEIQLSKVSF QHEVYPEESA IAGGLGQELD ERPLSRQVLI
1510 1520 1530 1540 1550
VQELEIRDRL ATSKINKFLH LHTSERLPRR THSNMLTIKA LHVAPTSSVG
1560 1570 1580 1590 1600
GPECCLRVSM MPLRLNVDQD ALFFLKDFFT SLAASINPMV PGDTSEAPRE
1610 1620 1630 1640 1650
THSRPGSPQE GQSEDTETAS NPPEAPGSSH SSSDQQPIYF REFRFTSEVP
1660 1670 1680 1690 1700
ICLDYHGKHV TVDQVGTFMG LLIGLAQLNC SELKLKRLCC RHGLLGVDKV
1710 1720 1730 1740 1750
LCYALNEWLQ DIRKNQLPGL LGGVGPMHSV VQLFQGFRDL LWLPIEQYRK
1760 1770 1780 1790 1800
DGRLIRGLQR GAASFGSSTA SAALELSNRL VQAIQATAET VYDILSPASP
1810 1820 1830 1840 1850
VSRSLQDKRS SRKLRRGQQP ADLREGMAKA YDAVREGILD TAQTICDVAS
1860 1870 1880 1890 1900
RGHEQKGLTG AVGGVIRQLP PTVVKPIIVA TEATSNVLGG MRNQILPDAH
1910
KDHALKWRLE EAQD
Length:1,914
Mass (Da):210,939
Last modified:September 19, 2006 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i16742111A5534572
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6V3Y9F6V3Y9_MOUSE
Autophagy-related protein 2 homolog...
Atg2a
1,718Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAC97942 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAE30685 differs from that shown. Reason: Frameshift.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti285L → M in BAC97942 (PubMed:14621295).Curated1
Sequence conflicti1738R → G in BAE30685 (PubMed:16141072).Curated1
Sequence conflicti1865V → M in BAE30685 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK129132 mRNA Translation: BAC97942.1 Different initiation.
BC022657 mRNA Translation: AAH22657.1
BC056482 mRNA Translation: AAH56482.2
BC063264 mRNA Translation: AAH63264.2
AK151782 mRNA Translation: BAE30685.1 Frameshift.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS29500.1

NCBI Reference Sequences

More...
RefSeqi
NP_919329.2, NM_194348.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000045351; ENSMUSP00000046412; ENSMUSG00000024773
ENSMUST00000201269; ENSMUSP00000144551; ENSMUSG00000106907

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
329015

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:329015

UCSC genome browser

More...
UCSCi
uc008ghu.1, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129132 mRNA Translation: BAC97942.1 Different initiation.
BC022657 mRNA Translation: AAH22657.1
BC056482 mRNA Translation: AAH56482.2
BC063264 mRNA Translation: AAH63264.2
AK151782 mRNA Translation: BAE30685.1 Frameshift.
CCDSiCCDS29500.1
RefSeqiNP_919329.2, NM_194348.3

3D structure databases

SMRiQ6P4T0
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi236694, 5 interactors
IntActiQ6P4T0, 2 interactors
STRINGi10090.ENSMUSP00000046412

PTM databases

iPTMnetiQ6P4T0
PhosphoSitePlusiQ6P4T0

Proteomic databases

EPDiQ6P4T0
MaxQBiQ6P4T0
PaxDbiQ6P4T0
PRIDEiQ6P4T0

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
44102, 169 antibodies

Genome annotation databases

EnsembliENSMUST00000045351; ENSMUSP00000046412; ENSMUSG00000024773
ENSMUST00000201269; ENSMUSP00000144551; ENSMUSG00000106907
GeneIDi329015
KEGGimmu:329015
UCSCiuc008ghu.1, mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
23130
MGIiMGI:1916291, Atg2a

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiKOG2993, Eukaryota
GeneTreeiENSGT00620000087966
HOGENOMiCLU_001781_0_0_1
InParanoidiQ6P4T0
KOiK17906
OMAiINKFLYH
OrthoDBi196897at2759
PhylomeDBiQ6P4T0
TreeFamiTF313482

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
329015, 1 hit in 18 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Atg2a, mouse

Protein Ontology

More...
PROi
PR:Q6P4T0
RNActiQ6P4T0, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000024773, Expressed in embryo and 221 other tissues
ExpressionAtlasiQ6P4T0, baseline and differential
GenevisibleiQ6P4T0, MM

Family and domain databases

InterProiView protein in InterPro
IPR026849, ATG2
IPR015412, Autophagy-rel_C
IPR026854, VPS13-like_N
PANTHERiPTHR13190, PTHR13190, 1 hit
PfamiView protein in Pfam
PF09333, ATG_C, 1 hit
PF12624, Chorein_N, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiATG2A_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6P4T0
Secondary accession number(s): Q3U9I1
, Q6PHN0, Q6ZQC4, Q8R213
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: September 19, 2006
Last modified: October 7, 2020
This is version 113 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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