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Protein

Dynein assembly factor with WDR repeat domains 1

Gene

daw1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May play a role in axonemal outer row dynein assembly.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Dynein assembly factor with WDR repeat domains 1
Alternative name(s):
Outer row dynein assembly protein 16 homolog
WD repeat-containing protein 69
Gene namesi
Name:daw1
Synonyms:wdr69
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-5802528 daw1

Subcellular locationi

Keywords - Cellular componenti

Cell projection, Cilium

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002426591 – 415Dynein assembly factor with WDR repeat domains 1Add BLAST415

Proteomic databases

PaxDbiQ6P2Y2

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000027737

Structurei

3D structure databases

ProteinModelPortaliQ6P2Y2
SMRiQ6P2Y2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati90 – 129WD 1Add BLAST40
Repeati132 – 174WD 2Add BLAST43
Repeati175 – 214WD 3Add BLAST40
Repeati217 – 256WD 4Add BLAST40
Repeati259 – 298WD 5Add BLAST40
Repeati301 – 340WD 6Add BLAST40
Repeati343 – 384WD 7Add BLAST42
Repeati386 – 415WD 8Add BLAST30

Sequence similaritiesi

Belongs to the WD repeat WDR69 family.Curated

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiKOG0272 Eukaryota
ENOG410XNP8 LUCA
HOGENOMiHOG000253909
HOVERGENiHBG103651
InParanoidiQ6P2Y2
KOiK19760

Family and domain databases

Gene3Di2.130.10.10, 4 hits
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 8 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 8 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 3 hits
PS50082 WD_REPEATS_2, 8 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

Q6P2Y2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLKRFLLRY FPPGIILEYE KGGELKTKAI DLLELSPTTD VDLVVEEIQK
60 70 80 90 100
AEPLITASRT QQVKQLILRL QEKIGQQDSR QFYLFKVLRA HILPLTNVAF
110 120 130 140 150
NKSGSSFITG SYDRTCKVWD TASGEELHTL EGHRNVVYAI QFNNPYGDKI
160 170 180 190 200
ATGSFDKTCK LWSAETGKCY HTFRGHTAEI VCLAFNPQST LIATGSMDTT
210 220 230 240 250
AKLWDIQSGE EALTLSGHAA EIISLSFNTT GDRLITGSFD HTVSVWEIPS
260 270 280 290 300
GRRIHTLIGH RGEISSAQFN WDCSLIATAS MDKSCKLWDS LNGKCVATLT
310 320 330 340 350
GHEDEVLDVT FDSTGQLVAT ASADGTARVY SASSRKCLAK LEGHEGEISK
360 370 380 390 400
ICFNAQGNRI LTASSDKTSR LWNPHTGECL QVLKGHTDEI FSCAFNYEGN
410
TIITGSKDNT CRIWR
Length:415
Mass (Da):45,989
Last modified:July 5, 2004 - v1
Checksum:i307F68FFAD70FC84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC064252 mRNA Translation: AAH64252.1
RefSeqiNP_989349.1, NM_204018.1
UniGeneiStr.14278

Genome annotation databases

GeneIDi394975
KEGGixtr:394975

Similar proteinsi

Entry informationi

Entry nameiDAW1_XENTR
AccessioniPrimary (citable) accession number: Q6P2Y2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: February 28, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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