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Protein

tRNA pseudouridine synthase

Gene
N/A
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

tRNA uridine(38-40) = tRNA pseudouridine(38-40).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotation
Biological processtRNA processingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Expressioni

Gene expression databases

ExpressionAtlasiQ6NKP7 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliQ6NKP7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 170PseudoU_synth_1InterPro annotationAdd BLAST111
Domaini211 – 370PseudoU_synth_1InterPro annotationAdd BLAST160

Sequence similaritiesi

Belongs to the tRNA pseudouridine synthase TruA family.UniRule annotation

Phylogenomic databases

eggNOGiKOG4393 Eukaryota
COG0101 LUCA
HOGENOMiHOG000248674
PhylomeDBiQ6NKP7

Family and domain databases

Gene3Di3.30.70.660, 2 hits
HAMAPiMF_00171 TruA, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR001406 PsdUridine_synth_TruA
IPR020097 PsdUridine_synth_TruA_a/b_dom
IPR020095 PsdUridine_synth_TruA_C
PANTHERiPTHR11142 PTHR11142, 1 hit
PfamiView protein in Pfam
PF01416 PseudoU_synth_1, 2 hits
SUPFAMiSSF55120 SSF55120, 2 hits

Sequencei

Sequence statusi: Complete.

Q6NKP7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDNLKHPLD CTASEESLER LSKVARIEGF SDEESEEQQG LADLESMNPV
60 70 80 90 100
NPRVQRYLVA IEYIGTRFSG SQQQAKDRTV VGVLQEAFHK FIGQPVKIFC
110 120 130 140 150
SSRTDAGVHA LSNVCHVDVE RISKRKPGEV LPPHEPGVVQ RAVNHFLQRK
160 170 180 190 200
DGDVMVIDVR CVPSNYHARY KAQERTYFYR LLSGSDPLSI LEKDRCWHVP
210 220 230 240 250
EELNLRFMQE ACRVLVGSHD FSSFRAAGCQ AKSPMRSLDE LNITEVPSTP
260 270 280 290 300
YFPSITERTL SNLNNGDPLA CSNQPKSETA GVTTNVGEVE GSTGGDSFGR
310 320 330 340 350
RRRHRCYVVT ARSRGFLYHQ VRLIVGALKC VGTGELTVSD VERILEAKTV
360 370
SAAKPMAPAS GLYLARVRYE FP
Length:372
Mass (Da):41,473
Last modified:July 5, 2004 - v1
Checksum:iC1A5E6A407833B2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT012647 mRNA Translation: AAT06466.1

Similar proteinsi

Entry informationi

Entry nameiQ6NKP7_ARATH
AccessioniPrimary (citable) accession number: Q6NKP7
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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