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Protein

GlcNAc-binding protein A

Gene

gbpA

Organism
Photobacterium profundum (strain SS9)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin.UniRule annotation

GO - Molecular functioni

Keywordsi

LigandChitin-binding

Protein family/group databases

CAZyiAA10 Auxiliary Activities 10
CBM73 Carbohydrate-Binding Module Family 73

Names & Taxonomyi

Protein namesi
Recommended name:
GlcNAc-binding protein AUniRule annotation
Gene namesi
Name:gbpAUniRule annotation
Ordered Locus Names:PBPRB0312
OrganismiPhotobacterium profundum (strain SS9)
Taxonomic identifieri298386 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium
Proteomesi
  • UP000000593 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24UniRule annotationAdd BLAST24
ChainiPRO_000022972125 – 488GlcNAc-binding protein AAdd BLAST464

Interactioni

Protein-protein interaction databases

STRINGi298386.PBPRB0312

Structurei

3D structure databases

ProteinModelPortaliQ6LKG5
SMRiQ6LKG5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 202Chitin-binding type-4UniRule annotationAdd BLAST178
Domaini439 – 480Chitin-binding type-3UniRule annotationAdd BLAST42

Sequence similaritiesi

Belongs to the GbpA family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108M1A Bacteria
COG3397 LUCA
HOGENOMiHOG000271617
KOiK21712
OMAiWTFTANH
OrthoDBiPOG091H0E2B

Family and domain databases

HAMAPiMF_01905 GbpA, 1 hit
InterProiView protein in InterPro
IPR004302 Cellulose/chitin-bd_N
IPR020879 GlcNAc-bd_A
IPR014756 Ig_E-set
PfamiView protein in Pfam
PF03067 LPMO_10, 1 hit
SUPFAMiSSF81296 SSF81296, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6LKG5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIMIITKKTL LPVTLALFSS GVMAHGYVSS VEGGVAESRA ALCKFPANGT
60 70 80 90 100
GEKNTNCGSV QWEPQSVEGP DGFPETGPPD GKIASAGLSQ FSPLDEQTVD
110 120 130 140 150
RWVKRPMQAG IQNFEWTFTA NHITRNWRYY ITKQDWNPNK SLTRSAFDLT
160 170 180 190 200
PFCQISGDMA KPPMRVHHSC NVPERKDYQV ILAVWEVGDT AASFYNVIDV
210 220 230 240 250
MFDGDLPTVP DWAVGGQIYP SMDLKSGDSV YTRVFDASGE NSALSTELTI
260 270 280 290 300
ETEQQGQANN WSYSLAQQIN NVYDNIRAGK ADGEGNFAPI YGANPIYLKE
310 320 330 340 350
GSGLERVEIG YNIITPEPDH DLDISGLENE YQIGDEPVSL ELNLTAQGDQ
360 370 380 390 400
FVELTVYNHN KEALANKQVT LNDGDSQAVS MRLSKSEPGH HMLVTRIKDS
410 420 430 440 450
SEGSLIDQIT NDFHLTEGGD PPEGDYDYIF PEGLKSYTAG SKVLATDGRI
460 470 480
YECKPFPYSG YCIQWSPSAT QFEPGVGSDW STAWIKLN
Length:488
Mass (Da):53,754
Last modified:July 5, 2004 - v1
Checksum:iA901322CEBDEB521
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378676 Genomic DNA Translation: CAG22185.1

Genome annotation databases

EnsemblBacteriaiCAG22185; CAG22185; PBPRB0312
KEGGippr:PBPRB0312

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR378676 Genomic DNA Translation: CAG22185.1

3D structure databases

ProteinModelPortaliQ6LKG5
SMRiQ6LKG5
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi298386.PBPRB0312

Protein family/group databases

CAZyiAA10 Auxiliary Activities 10
CBM73 Carbohydrate-Binding Module Family 73

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG22185; CAG22185; PBPRB0312
KEGGippr:PBPRB0312

Phylogenomic databases

eggNOGiENOG4108M1A Bacteria
COG3397 LUCA
HOGENOMiHOG000271617
KOiK21712
OMAiWTFTANH
OrthoDBiPOG091H0E2B

Family and domain databases

HAMAPiMF_01905 GbpA, 1 hit
InterProiView protein in InterPro
IPR004302 Cellulose/chitin-bd_N
IPR020879 GlcNAc-bd_A
IPR014756 Ig_E-set
PfamiView protein in Pfam
PF03067 LPMO_10, 1 hit
SUPFAMiSSF81296 SSF81296, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiGBPA_PHOPR
AccessioniPrimary (citable) accession number: Q6LKG5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: July 5, 2004
Last modified: October 10, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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