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Entry version 151 (02 Jun 2021)
Sequence version 1 (05 Jul 2004)
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Protein

Histone-lysine N-methyltransferase TRX1

Gene

TRX1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Possesses histone H3 methyltransferase activity in vitro (PubMed:24420930).

Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity (By similarity).

Involved in the regulation of flowering time and floral induction under long day (LD) conditions. Acts as an activator of flowering under LD conditions. May function through binding to EHD3, a repressor of GHD7 (PubMed:24420930).

By similarity1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi943ZincPROSITE-ProRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei978S-adenosyl-L-methioninePROSITE-ProRule annotation1
Metal bindingi989ZincPROSITE-ProRule annotation1
Metal bindingi991ZincPROSITE-ProRule annotation1
Metal bindingi996ZincPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri553 – 609Phorbol-ester/DAG-typePROSITE-ProRule annotationAdd BLAST57
Zinc fingeri564 – 615PHD-typePROSITE-ProRule annotationAdd BLAST52

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionChromatin regulator, Methyltransferase, Transferase
Biological processFlowering
LigandMetal-binding, S-adenosyl-L-methionine, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Histone-lysine N-methyltransferase TRX1Curated (EC:2.1.1.-1 Publication)
Short name:
OsTrx11 Publication
Alternative name(s):
Protein SET DOMAIN GROUP 723Curated
SET family protein 33Curated
Short name:
OsSET331 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TRX11 Publication
Synonyms:SDG723Curated, SET1 Publication
Ordered Locus Names:Os09g0134500Imported, LOC_Os09g04890Curated
ORF Names:P0406E03.49-1Imported, P0406E03.49-2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9
  • UP000000763 Componenti: Chromosome 9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Late-flowering phenotype under long day (LD) conditions.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004374381 – 1022Histone-lysine N-methyltransferase TRX1Add BLAST1022

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6K431

PRoteomics IDEntifications database

More...
PRIDEi
Q6K431

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in leaf blades and panicles.1 Publication

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with EHD3.

1 Publication

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4530.OS09T0134500-02

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q6K431

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini264 – 327PWWPPROSITE-ProRule annotationAdd BLAST64
Domaini402 – 461FYR N-terminalPROSITE-ProRule annotationAdd BLAST60
Domaini465 – 548FYR C-terminalPROSITE-ProRule annotationAdd BLAST84
Domaini861 – 979SETPROSITE-ProRule annotationAdd BLAST119
Domaini985 – 1001Post-SETPROSITE-ProRule annotationAdd BLAST17

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni31 – 151DisorderedSequence analysisAdd BLAST121
Regioni367 – 399DisorderedSequence analysisAdd BLAST33

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi78 – 95Basic and acidic residuesSequence analysisAdd BLAST18
Compositional biasi114 – 147Basic and acidic residuesSequence analysisAdd BLAST34
Compositional biasi367 – 382Polar residuesSequence analysisAdd BLAST16
Compositional biasi383 – 397Basic and acidic residuesSequence analysisAdd BLAST15

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri553 – 609Phorbol-ester/DAG-typePROSITE-ProRule annotationAdd BLAST57
Zinc fingeri564 – 615PHD-typePROSITE-ProRule annotationAdd BLAST52

Keywords - Domaini

Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1080, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_005729_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6K431

Identification of Orthologs from Complete Genome Data

More...
OMAi
PYIVSGF

Database of Orthologous Groups

More...
OrthoDBi
181572at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd15662, ePHD_ATX1_2_like, 1 hit
cd15494, PHD_ATX1_2_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.40.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR041956, ATX1/2_ePHD
IPR042010, ATX1/2_PHD
IPR034732, EPHD
IPR003889, FYrich_C
IPR003888, FYrich_N
IPR002219, PE/DAG-bd
IPR003616, Post-SET_dom
IPR000313, PWWP_dom
IPR001214, SET_dom
IPR002999, Tudor
IPR019786, Zinc_finger_PHD-type_CS
IPR011011, Znf_FYVE_PHD
IPR001965, Znf_PHD
IPR019787, Znf_PHD-finger
IPR013083, Znf_RING/FYVE/PHD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05965, FYRC, 1 hit
PF05964, FYRN, 1 hit
PF00855, PWWP, 1 hit
PF00856, SET, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00542, FYRC, 1 hit
SM00541, FYRN, 1 hit
SM00249, PHD, 2 hits
SM00508, PostSET, 1 hit
SM00293, PWWP, 1 hit
SM00317, SET, 1 hit
SM00333, TUDOR, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57903, SSF57903, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51543, FYRC, 1 hit
PS51542, FYRN, 1 hit
PS50868, POST_SET, 1 hit
PS50812, PWWP, 1 hit
PS50280, SET, 1 hit
PS50081, ZF_DAG_PE_2, 1 hit
PS01359, ZF_PHD_1, 1 hit
PS50016, ZF_PHD_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q6K431-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MVIAVEGGFV HEEEEVDHPI RYLPLGRVYS SSAPCPLPKK PRSAEDGKPP
60 70 80 90 100
VIVYYRRRRK KPRVEGPPPS PATAPPMLHP REDDEDEEVT RRKGSLKYEL
110 120 130 140 150
LSLGQAPPAL GGDGEEPARR RCLRRSGGAE RRGYFSEPKR RQRQGVHKEA
160 170 180 190 200
ASSAGRRWLE LEIEAADPLA FVGLGCKVFW PLDEDWYKGS ITGYNEATKK
210 220 230 240 250
HSVKYDDGES EDLNLADERI KFSISSEEMK CRNLKFGISN LNKRGYDELL
260 270 280 290 300
ALAVSLHDYQ GLDPGDLVWA KLTGHAMWPA VVVDESNVPA NRALKPGRLD
310 320 330 340 350
QSILVQFFGT HDFARIKLKQ AVPFLNGLLS SLHLKCKQAR FYRSLEEAKE
360 370 380 390 400
FLCTQLLPEN MLQLQKSMEK GSSDANSNKD VHSCDNLSED KTAESGGDYD
410 420 430 440 450
EMTPIELGNL RVSKLGRIVT DSDYFHNKKH IWPEGYTAFR KFRSVKDPHV
460 470 480 490 500
VILYKMEVLR NSDIKARPLF RVTSEDGTQI DGSTPNTCWK EIYCRLKEKQ
510 520 530 540 550
RNVASGLDRD VCQGSGSYMF GFSNPQIRQL IQELPNARSC LKYFENAGDT
560 570 580 590 600
FRGYRAVHVN WKDLDYCSVC DMDEEYEDNL FLQCDKCRMM VHARCYGELE
610 620 630 640 650
PLNGVLWLCN LCRPEAPRVS PRCCLCPVTG GAMKPTTDGR WAHLACAIWI
660 670 680 690 700
PETCLKDVKR MEPIDGLSRI NKDRWKLLCS ICGVAYGACI QCSHPTCRVA
710 720 730 740 750
YHPLCARAAD LCVELEDDDK IHLMLLDEDE DPCIRLLSYC KKHRQPSTER
760 770 780 790 800
PSLESNLAKP AVVVQTDAVP PSGCARTEPY NIHGRRGQKQ PQVMATASVK
810 820 830 840 850
RLYVENMPYI VSGFCQNRVG HDAISEPIQS VGFLDVAHQE AVGNVSSMIE
860 870 880 890 900
KYKSMKATFR RRLAFGKSRI HGFGVFAKVS HKAGDMMIEY IGELVRPPIS
910 920 930 940 950
DIRERRIYNS LVGAGTYMFR IDDERVIDAT RAGSIAHLIN HSCEPNCYSR
960 970 980 990 1000
VISVLGDEHI IIFAKRDINP WEELTYDYRF VSSDQRLPCY CGFPKCRGVV
1010 1020
NDVEAEGQSA KIRVNRSELF QQ
Length:1,022
Mass (Da):115,660
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i121B74C4998D773A
GO
Isoform 2 (identifier: Q6K431-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     869-873: RIHGF → INLYQ
     874-1022: Missing.

Show »
Length:873
Mass (Da):98,683
Checksum:i386DF369FF197CF7
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_058520869 – 873RIHGF → INLYQ in isoform 2. 5
Alternative sequenceiVSP_058521874 – 1022Missing in isoform 2. Add BLAST149

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AP005583 Genomic DNA Translation: BAD22318.1
AP005583 Genomic DNA Translation: BAD22319.1
AP008215 Genomic DNA Translation: BAF24549.1
AP014965 Genomic DNA Translation: BAT06966.1
AP014965 Genomic DNA Translation: BAT06967.1
AK065095 mRNA No translation available.
AK074022 mRNA Translation: BAG93767.1

NCBI Reference Sequences

More...
RefSeqi
XP_015612383.1, XM_015756897.1 [Q6K431-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
Os09t0134500-01; Os09t0134500-01; Os09g0134500 [Q6K431-2]
Os09t0134500-02; Os09t0134500-02; Os09g0134500 [Q6K431-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
4346464

Gramene; a comparative resource for plants

More...
Gramenei
Os09t0134500-01; Os09t0134500-01; Os09g0134500 [Q6K431-2]
Os09t0134500-02; Os09t0134500-02; Os09g0134500 [Q6K431-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
osa:4346464

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005583 Genomic DNA Translation: BAD22318.1
AP005583 Genomic DNA Translation: BAD22319.1
AP008215 Genomic DNA Translation: BAF24549.1
AP014965 Genomic DNA Translation: BAT06966.1
AP014965 Genomic DNA Translation: BAT06967.1
AK065095 mRNA No translation available.
AK074022 mRNA Translation: BAG93767.1
RefSeqiXP_015612383.1, XM_015756897.1 [Q6K431-1]

3D structure databases

SMRiQ6K431
ModBaseiSearch...

Protein-protein interaction databases

STRINGi4530.OS09T0134500-02

Proteomic databases

PaxDbiQ6K431
PRIDEiQ6K431

Genome annotation databases

EnsemblPlantsiOs09t0134500-01; Os09t0134500-01; Os09g0134500 [Q6K431-2]
Os09t0134500-02; Os09t0134500-02; Os09g0134500 [Q6K431-1]
GeneIDi4346464
GrameneiOs09t0134500-01; Os09t0134500-01; Os09g0134500 [Q6K431-2]
Os09t0134500-02; Os09t0134500-02; Os09g0134500 [Q6K431-1]
KEGGiosa:4346464

Phylogenomic databases

eggNOGiKOG1080, Eukaryota
HOGENOMiCLU_005729_0_0_1
InParanoidiQ6K431
OMAiPYIVSGF
OrthoDBi181572at2759

Family and domain databases

CDDicd15662, ePHD_ATX1_2_like, 1 hit
cd15494, PHD_ATX1_2_like, 1 hit
Gene3Di3.30.40.10, 2 hits
InterProiView protein in InterPro
IPR041956, ATX1/2_ePHD
IPR042010, ATX1/2_PHD
IPR034732, EPHD
IPR003889, FYrich_C
IPR003888, FYrich_N
IPR002219, PE/DAG-bd
IPR003616, Post-SET_dom
IPR000313, PWWP_dom
IPR001214, SET_dom
IPR002999, Tudor
IPR019786, Zinc_finger_PHD-type_CS
IPR011011, Znf_FYVE_PHD
IPR001965, Znf_PHD
IPR019787, Znf_PHD-finger
IPR013083, Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF05965, FYRC, 1 hit
PF05964, FYRN, 1 hit
PF00855, PWWP, 1 hit
PF00856, SET, 1 hit
SMARTiView protein in SMART
SM00542, FYRC, 1 hit
SM00541, FYRN, 1 hit
SM00249, PHD, 2 hits
SM00508, PostSET, 1 hit
SM00293, PWWP, 1 hit
SM00317, SET, 1 hit
SM00333, TUDOR, 1 hit
SUPFAMiSSF57903, SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS51543, FYRC, 1 hit
PS51542, FYRN, 1 hit
PS50868, POST_SET, 1 hit
PS50812, PWWP, 1 hit
PS50280, SET, 1 hit
PS50081, ZF_DAG_PE_2, 1 hit
PS01359, ZF_PHD_1, 1 hit
PS50016, ZF_PHD_2, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTRX1_ORYSJ
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6K431
Secondary accession number(s): Q6K430
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 5, 2016
Last sequence update: July 5, 2004
Last modified: June 2, 2021
This is version 151 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families
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