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UniProtKB - Q6IS68 (Q6IS68_DANRE)
Protein
Submitted name:
Zgc:172187 protein
Gene
ubb
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- protein tag Source: GO_Central
- structural constituent of ribosome Source: GO_Central
- ubiquitin protein ligase binding Source: GO_Central
GO - Biological processi
- modification-dependent protein catabolic process Source: GO_Central
- protein ubiquitination Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: Zgc:172187 proteinImported |
Gene namesi | |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Organism-specific databases
ZFINi | ZDB-GENE-050411-10, ubb |
Subcellular locationi
Cytosol
- cytosolic small ribosomal subunit Source: GO_Central
Nucleus
- nucleus Source: GO_Central
Other locations
- cytoplasm Source: GO_Central
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 15 – 90 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 91 – 166 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 167 – 242 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 243 – 318 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 319 – 394 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 395 – 470 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 471 – 546 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 | |
Domaini | 547 – 622 | Ubiquitin-likeInterPro annotationAdd BLAST | 76 |
Phylogenomic databases
OrthoDBi | 1536766at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR000626, Ubiquitin-like_dom IPR029071, Ubiquitin-like_domsf IPR019954, Ubiquitin_CS IPR019956, Ubiquitin_dom |
Pfami | View protein in Pfam PF00240, ubiquitin, 8 hits |
PRINTSi | PR00348, UBIQUITIN |
SMARTi | View protein in SMART SM00213, UBQ, 8 hits |
SUPFAMi | SSF54236, SSF54236, 8 hits |
PROSITEi | View protein in PROSITE PS00299, UBIQUITIN_1, 8 hits PS50053, UBIQUITIN_2, 8 hits |
i Sequence
Sequence statusi: Fragment.
Q6IS68-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
FQESYCSVST QTLTMQIFVK TLTGKTITLE VEPSDTIENV KAKIQDKEGI
60 70 80 90 100
PPDQQRLIFA GKQLEDGRTL SDYNIQKEST LHLVLRLRGG MQIFVKTLTG
110 120 130 140 150
KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN
160 170 180 190 200
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE
210 220 230 240 250
GIPPDQQRLI FAGKQLEDGR TLSDYNIQKE STLHLVLRLR GGMQIFVKTL
260 270 280 290 300
TGKTITLEVE PSDTIENVKA KIQDKEGIPP DQQRLIFAGK QLEDGRTLSD
310 320 330 340 350
YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVEPSDT IENVKAKIQD
360 370 380 390 400
KEGIPPDQQR LIFAGKQLED GRTLSDYNIQ KESTLHLVLR LRGGMQIFVK
410 420 430 440 450
TLTGKTITLE VEPSDTIENV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL
460 470 480 490 500
SDYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVEPS DTIENVKAKI
510 520 530 540 550
QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGMQIF
560 570 580 590 600
VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR
610 620
TLSDYNIQKE STLHLVLRLR GGSD
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 1 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC069831 mRNA Translation: AAH69831.1 BC093444 mRNA Translation: AAH93444.1 |
RefSeqi | NP_001013290.2, NM_001013272.2 |
Genome annotation databases
GeneIDi | 550134 |
KEGGi | dre:550134 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC069831 mRNA Translation: AAH69831.1 BC093444 mRNA Translation: AAH93444.1 |
RefSeqi | NP_001013290.2, NM_001013272.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
GeneIDi | 550134 |
KEGGi | dre:550134 |
Organism-specific databases
CTDi | 7314 |
ZFINi | ZDB-GENE-050411-10, ubb |
Phylogenomic databases
OrthoDBi | 1536766at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR000626, Ubiquitin-like_dom IPR029071, Ubiquitin-like_domsf IPR019954, Ubiquitin_CS IPR019956, Ubiquitin_dom |
Pfami | View protein in Pfam PF00240, ubiquitin, 8 hits |
PRINTSi | PR00348, UBIQUITIN |
SMARTi | View protein in SMART SM00213, UBQ, 8 hits |
SUPFAMi | SSF54236, SSF54236, 8 hits |
PROSITEi | View protein in PROSITE PS00299, UBIQUITIN_1, 8 hits PS50053, UBIQUITIN_2, 8 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | Q6IS68_DANRE | |
Accessioni | Q6IS68Primary (citable) accession number: Q6IS68 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 5, 2004 |
Last sequence update: | July 5, 2004 | |
Last modified: | May 25, 2022 | |
This is version 112 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |