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Entry version 143 (02 Jun 2021)
Sequence version 1 (05 Jul 2004)
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Protein

rRNA methyltransferase 1, mitochondrial

Gene

MRM1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

S-adenosyl-L-methionine-dependent 2'-O-ribose methyltransferase that catalyzes the formation of 2'-O-methylguanosine at position 1145 (Gm1145) in the 16S mitochondrial large subunit ribosomal RNA (mtLSU rRNA), a universally conserved modification in the peptidyl transferase domain of the mtLSU rRNA.

1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionMethyltransferase, Transferase
Biological processrRNA processing
LigandS-adenosyl-L-methionine

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
2.1.1.B125, 2681

Pathway Commons web resource for biological pathway data

More...
PathwayCommonsi
Q6IN84

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-HSA-6793080, rRNA modification in the mitochondrion

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
rRNA methyltransferase 1, mitochondrial1 Publication (EC:2.1.1.-1 Publication)
Alternative name(s):
16S rRNA (guanosine(1145)-2'-O)-methyltransferase1 Publication
16S rRNA [Gm1145] 2'-O-methyltransferase1 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:MRM11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 17

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:26202, MRM1

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q6IN84

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSG00000278619.4

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Mitochondrion

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
79922

Open Targets

More...
OpenTargetsi
ENSG00000278619

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA142671338

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q6IN84, Tbio

Genetic variation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
MRM1

Domain mapping of disease mutations (DMDM)

More...
DMDMi
74736506

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 20MitochondrionSequence analysisAdd BLAST20
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000027320221 – 353rRNA methyltransferase 1, mitochondrialAdd BLAST333

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q6IN84

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q6IN84

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q6IN84

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q6IN84

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6IN84

PeptideAtlas

More...
PeptideAtlasi
Q6IN84

PRoteomics IDEntifications database

More...
PRIDEi
Q6IN84

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
66442 [Q6IN84-1]
66443 [Q6IN84-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6IN84

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6IN84

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000278619, Expressed in mucosa of transverse colon and 127 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q6IN84, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q6IN84, HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
ENSG00000278619, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Q6IN84
With#Exp.IntAct
ADIPOQ [Q15848]3EBI-5454865,EBI-10827839
AGTRAP [Q6RW13]3EBI-5454865,EBI-741181
AGTRAP - isoform 2 [Q6RW13-2]3EBI-5454865,EBI-11522760
AQP1 [P29972]3EBI-5454865,EBI-745213
AQP2 [P41181]3EBI-5454865,EBI-12701138
AQP3 [Q92482]3EBI-5454865,EBI-2808854
BRICD5 - isoform 2 [Q6PL45-2]3EBI-5454865,EBI-12244618
CCL4 [P13236]3EBI-5454865,EBI-2873970
CCL4L2 [Q8NHW4]3EBI-5454865,EBI-10271156
CGGBP1 [Q9UFW8]4EBI-5454865,EBI-723153
CMTM3 [Q96MX0]3EBI-5454865,EBI-7247651
CMTM5 - isoform 2 [Q96DZ9-2]3EBI-5454865,EBI-11522780
CNIH1 [O95406]3EBI-5454865,EBI-12172273
COQ8A [Q8NI60]3EBI-5454865,EBI-745535
DNAJC30 [Q96LL9]3EBI-5454865,EBI-8639143
ERG28 [Q9UKR5]3EBI-5454865,EBI-711490
ESRRG - isoform 3 [P62508-3]5EBI-5454865,EBI-12001340
FKBP7 [Q9Y680]3EBI-5454865,EBI-3918971
ITGAM [P11215]3EBI-5454865,EBI-2568251
KLRG1 [Q96E93]3EBI-5454865,EBI-750770
LPAR3 [Q9UBY5]3EBI-5454865,EBI-12033434
MAL2 [Q969L2]3EBI-5454865,EBI-944295
MESD [Q14696]3EBI-5454865,EBI-6165891
MGST3 [O14880]3EBI-5454865,EBI-724754
NRM [Q8IXM6]3EBI-5454865,EBI-10262547
NXPE3 [Q969Y0]3EBI-5454865,EBI-17973370
RHBDD2 - isoform 3 [Q6NTF9-3]3EBI-5454865,EBI-17589229
RNASE10 [Q5GAN6]3EBI-5454865,EBI-12423312
SELENOK [Q9Y6D0]3EBI-5454865,EBI-9679163
SPX [Q9BT56]3EBI-5454865,EBI-17975052
STATH [P02808]3EBI-5454865,EBI-738687
STX7 [O15400]3EBI-5454865,EBI-3221827
SYP [P08247]3EBI-5454865,EBI-9071725
SYT3 [Q9BQG1]3EBI-5454865,EBI-17284568
TMEM11 [P17152]3EBI-5454865,EBI-723946
TMEM243 [Q9BU79]3EBI-5454865,EBI-12887458
TMEM42 [Q69YG0]3EBI-5454865,EBI-12038591
TMEM97 [Q5BJF2]3EBI-5454865,EBI-12111910
TTPA [P49638]3EBI-5454865,EBI-10210710
TUSC5 [A5PKU2]3EBI-5454865,EBI-11988865
VKORC1L1 [Q8N0U8]3EBI-5454865,EBI-11337915
VSTM1 - isoform 3 [Q6UX27-3]3EBI-5454865,EBI-12190699
Isoform 2 [Q6IN84-2]
With#Exp.IntAct
CASP6 [P55212]3EBI-25835707,EBI-718729
CHAT - isoform R [P28329-3]3EBI-25835707,EBI-25837549
FGFR3 [P22607]3EBI-25835707,EBI-348399
GRIN2C [Q14957]3EBI-25835707,EBI-8285963
GSN [P06396]3EBI-25835707,EBI-351506
HMOX2 [P30519]3EBI-25835707,EBI-712096
LAMP2 - isoform LAMP-2B [P13473-2]3EBI-25835707,EBI-21591415
PRPF40A - isoform 2 [O75400-2]3EBI-25835707,EBI-5280197
RAN [P62826]3EBI-25835707,EBI-286642
UBQLN1 [Q9UMX0]3EBI-25835707,EBI-741480
Q9Y6493EBI-25835707,EBI-25900580

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
122999, 314 interactors

Protein interaction database and analysis system

More...
IntActi
Q6IN84, 86 interactors

Molecular INTeraction database

More...
MINTi
Q6IN84

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000481559

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q6IN84, protein

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni311 – 353DisorderedSequence analysisAdd BLAST43

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0838, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000018761

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_021322_5_1_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6IN84

Identification of Orthologs from Complete Genome Data

More...
OMAi
QVPPYEY

Database of Orthologous Groups

More...
OrthoDBi
1412032at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6IN84

TreeFam database of animal gene trees

More...
TreeFami
TF315167

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.1330.30, 1 hit
3.40.1280.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR029028, Alpha/beta_knot_MTases
IPR029064, L30e-like
IPR004441, rRNA_MeTrfase_TrmH
IPR001537, SpoU_MeTrfase
IPR013123, SpoU_subst-bd
IPR029026, tRNA_m1G_MTases_N

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00588, SpoU_methylase, 1 hit
PF08032, SpoU_sub_bind, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00967, SpoU_sub_bind, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF55315, SSF55315, 1 hit
SSF75217, SSF75217, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00186, rRNA_methyl_3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q6IN84-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MALLSTVRGA TWGRLVTRHF SHAARHGERP GGEELSRLLL DDLVPTSRLE
60 70 80 90 100
LLFGMTPCLL ALQAARRSVA RLLLQAGKAG LQGKRAELLR MAEARDIPVL
110 120 130 140 150
RPRRQKLDTM CRYQVHQGVC MEVSPLRPRP WREAGEASPG DDPQQLWLVL
160 170 180 190 200
DGIQDPRNFG AVLRSAHFLG VDKVITSRRN SCPLTPVVSK SSAGAMEVMD
210 220 230 240 250
VFSTDDLTGF LQTKAQQGWL VAGTVGCPST EDPQSSEIPI MSCLEFLWER
260 270 280 290 300
PTLLVLGNEG SGLSQEVQAS CQLLLTILPR RQLPPGLESL NVSVAAGILL
310 320 330 340 350
HSICSQRKGF PTEGERRQLL QDPQEPSARS EGLSMAQHPG LSSGPEKERQ

NEG
Length:353
Mass (Da):38,638
Last modified:July 5, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD47B4B147523D07D
GO
Isoform 2 (identifier: Q6IN84-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-198: Missing.

Show »
Length:155
Mass (Da):16,770
Checksum:i22EB6F2DE004386D
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A087WZC1A0A087WZC1_HUMAN
Mitochondrial rRNA methyltransferas...
MRM1 hCG_30203
158Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_06190698P → S. Corresponds to variant dbSNP:rs60978234Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0224941 – 198Missing in isoform 2. 3 PublicationsAdd BLAST198

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK026231 mRNA Translation: BAB15401.1
AK292307 mRNA Translation: BAF84996.1
CR457357 mRNA Translation: CAG33638.1
CH471199 Genomic DNA Translation: EAW57571.1
BC009416 mRNA Translation: AAH09416.2
BC072411 mRNA Translation: AAH72411.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS32631.1 [Q6IN84-1]

NCBI Reference Sequences

More...
RefSeqi
NP_079140.2, NM_024864.4 [Q6IN84-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000611231; ENSP00000478520; ENSG00000274853 [Q6IN84-1]
ENST00000614766; ENSP00000481559; ENSG00000278619 [Q6IN84-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
79922

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:79922

UCSC genome browser

More...
UCSCi
uc002hne.4, human [Q6IN84-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK026231 mRNA Translation: BAB15401.1
AK292307 mRNA Translation: BAF84996.1
CR457357 mRNA Translation: CAG33638.1
CH471199 Genomic DNA Translation: EAW57571.1
BC009416 mRNA Translation: AAH09416.2
BC072411 mRNA Translation: AAH72411.1
CCDSiCCDS32631.1 [Q6IN84-1]
RefSeqiNP_079140.2, NM_024864.4 [Q6IN84-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi122999, 314 interactors
IntActiQ6IN84, 86 interactors
MINTiQ6IN84
STRINGi9606.ENSP00000481559

PTM databases

iPTMnetiQ6IN84
PhosphoSitePlusiQ6IN84

Genetic variation databases

BioMutaiMRM1
DMDMi74736506

Proteomic databases

EPDiQ6IN84
jPOSTiQ6IN84
MassIVEiQ6IN84
MaxQBiQ6IN84
PaxDbiQ6IN84
PeptideAtlasiQ6IN84
PRIDEiQ6IN84
ProteomicsDBi66442 [Q6IN84-1]
66443 [Q6IN84-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

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Antibodypediai
72774, 121 antibodies

The DNASU plasmid repository

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DNASUi
79922

Genome annotation databases

EnsembliENST00000611231; ENSP00000478520; ENSG00000274853 [Q6IN84-1]
ENST00000614766; ENSP00000481559; ENSG00000278619 [Q6IN84-1]
GeneIDi79922
KEGGihsa:79922
UCSCiuc002hne.4, human [Q6IN84-1]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
79922
DisGeNETi79922

GeneCards: human genes, protein and diseases

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GeneCardsi
MRM1
HGNCiHGNC:26202, MRM1
HPAiENSG00000278619, Low tissue specificity
neXtProtiNX_Q6IN84
OpenTargetsiENSG00000278619
PharmGKBiPA142671338
VEuPathDBiHostDB:ENSG00000278619.4

GenAtlas: human gene database

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GenAtlasi
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Phylogenomic databases

eggNOGiKOG0838, Eukaryota
GeneTreeiENSGT00390000018761
HOGENOMiCLU_021322_5_1_1
InParanoidiQ6IN84
OMAiQVPPYEY
OrthoDBi1412032at2759
PhylomeDBiQ6IN84
TreeFamiTF315167

Enzyme and pathway databases

BRENDAi2.1.1.B125, 2681
PathwayCommonsiQ6IN84
ReactomeiR-HSA-6793080, rRNA modification in the mitochondrion

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
79922, 15 hits in 988 CRISPR screens

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
79922
PharosiQ6IN84, Tbio

Protein Ontology

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PROi
PR:Q6IN84
RNActiQ6IN84, protein

Gene expression databases

BgeeiENSG00000278619, Expressed in mucosa of transverse colon and 127 other tissues
ExpressionAtlasiQ6IN84, baseline and differential
GenevisibleiQ6IN84, HS

Family and domain databases

Gene3Di3.30.1330.30, 1 hit
3.40.1280.10, 1 hit
InterProiView protein in InterPro
IPR029028, Alpha/beta_knot_MTases
IPR029064, L30e-like
IPR004441, rRNA_MeTrfase_TrmH
IPR001537, SpoU_MeTrfase
IPR013123, SpoU_subst-bd
IPR029026, tRNA_m1G_MTases_N
PfamiView protein in Pfam
PF00588, SpoU_methylase, 1 hit
PF08032, SpoU_sub_bind, 1 hit
SMARTiView protein in SMART
SM00967, SpoU_sub_bind, 1 hit
SUPFAMiSSF55315, SSF55315, 1 hit
SSF75217, SSF75217, 1 hit
TIGRFAMsiTIGR00186, rRNA_methyl_3, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiMRM1_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6IN84
Secondary accession number(s): A8K8E2, Q96GK2, Q9H664
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: July 5, 2004
Last modified: June 2, 2021
This is version 143 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with genetic variants
    List of human entries with genetic variants
  3. Human variants curated from literature reports
    Index of human variants curated from literature reports
  4. SIMILARITY comments
    Index of protein domains and families
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