UniProtKB - Q6IN14 (Q6IN14_RAT)
Protein
Tetraspanin
Gene
Cd82
Organism
Rattus norvegicus (Rat)
Status
Names & Taxonomyi
Protein namesi | Recommended name: TetraspaninUniRule annotation |
Gene namesi | Name:Cd82Imported ORF Names:rCG_26283Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 69070, Cd82 |
Subcellular locationi
Other locations
- Membrane UniRule annotationARBA annotation; Multi-pass membrane protein UniRule annotationARBA annotation
Plasma Membrane
- plasma membrane Source: Ensembl
Other locations
- integral component of membrane Source: UniProtKB-UniRule
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 12 – 36 | HelicalUniRule annotationAdd BLAST | 25 | |
Transmembranei | 56 – 78 | HelicalUniRule annotationAdd BLAST | 23 | |
Transmembranei | 85 – 108 | HelicalUniRule annotationAdd BLAST | 24 | |
Transmembranei | 227 – 252 | HelicalUniRule annotationAdd BLAST | 26 |
Keywords - Cellular componenti
MembraneExpressioni
Gene expression databases
Bgeei | ENSRNOG00000000047, Expressed in jejunum and 21 other tissues |
Family & Domainsi
Sequence similaritiesi
Keywords - Domaini
Transmembrane, Transmembrane helixUniRule annotationPhylogenomic databases
GeneTreei | ENSGT00940000158481 |
HOGENOMi | CLU_055524_4_1_1 |
OMAi | CRHIHSE |
OrthoDBi | 1207549at2759 |
TreeFami | TF352892 |
Family and domain databases
Gene3Di | 1.10.1450.10, 1 hit |
InterProi | View protein in InterPro IPR000301, Tetraspanin IPR018499, Tetraspanin/Peripherin IPR018503, Tetraspanin_CS IPR008952, Tetraspanin_EC2_sf |
Pfami | View protein in Pfam PF00335, Tetraspanin, 1 hit |
PIRSFi | PIRSF002419, Tetraspanin, 1 hit |
PRINTSi | PR00259, TMFOUR |
SUPFAMi | SSF48652, SSF48652, 1 hit |
PROSITEi | View protein in PROSITE PS00421, TM4_1, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
Q6IN14-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGAGCVKVTK YFLFLFNLLF FILGAVILGF GVWILADKSS FISVLQTSSS
60 70 80 90 100
SLQVGAYVFI GVGAITMLMG FLGCIGAVNE VRCLLGLYFV FLLLILIAQV
110 120 130 140 150
TVGVLFYFNA DKLKQEMGNT VMDIIQNYSV NASSSREEAW DYVQAQVKCC
160 170 180 190 200
GWVSPSNWTR NPVLKNSTKT TYPCSCEKTK EEDNQLIVKK GFCESDNSTA
210 220 230 240 250
SENSPEDWPV HPEGCMEKAQ AWLQENFGIL LGVCAGVAVI ELLGLFLSIC
260
LCRYIHSEDY SKVPKY
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketO70352 | CD82_RAT | CD82 antigen | Cd82 Kai1 | 266 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07052895 Genomic DNA No translation available. BC072498 mRNA Translation: AAH72498.1 CH473949 Genomic DNA Translation: EDL79589.1 CH473949 Genomic DNA Translation: EDL79590.1 |
RefSeqi | NP_113985.2, NM_031797.2 XP_006234659.1, XM_006234597.3 XP_006234660.1, XM_006234598.1 |
Genome annotation databases
Ensembli | ENSRNOT00000000052; ENSRNOP00000000052; ENSRNOG00000000047 |
GeneIDi | 83628 |
KEGGi | rno:83628 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07052895 Genomic DNA No translation available. BC072498 mRNA Translation: AAH72498.1 CH473949 Genomic DNA Translation: EDL79589.1 CH473949 Genomic DNA Translation: EDL79590.1 |
RefSeqi | NP_113985.2, NM_031797.2 XP_006234659.1, XM_006234597.3 XP_006234660.1, XM_006234598.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PRIDEi | Q6IN14 |
Genome annotation databases
Ensembli | ENSRNOT00000000052; ENSRNOP00000000052; ENSRNOG00000000047 |
GeneIDi | 83628 |
KEGGi | rno:83628 |
Organism-specific databases
CTDi | 3732 |
RGDi | 69070, Cd82 |
Phylogenomic databases
GeneTreei | ENSGT00940000158481 |
HOGENOMi | CLU_055524_4_1_1 |
OMAi | CRHIHSE |
OrthoDBi | 1207549at2759 |
TreeFami | TF352892 |
Gene expression databases
Bgeei | ENSRNOG00000000047, Expressed in jejunum and 21 other tissues |
Family and domain databases
Gene3Di | 1.10.1450.10, 1 hit |
InterProi | View protein in InterPro IPR000301, Tetraspanin IPR018499, Tetraspanin/Peripherin IPR018503, Tetraspanin_CS IPR008952, Tetraspanin_EC2_sf |
Pfami | View protein in Pfam PF00335, Tetraspanin, 1 hit |
PIRSFi | PIRSF002419, Tetraspanin, 1 hit |
PRINTSi | PR00259, TMFOUR |
SUPFAMi | SSF48652, SSF48652, 1 hit |
PROSITEi | View protein in PROSITE PS00421, TM4_1, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q6IN14_RAT | |
Accessioni | Q6IN14Primary (citable) accession number: Q6IN14 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 5, 2004 |
Last sequence update: | July 5, 2004 | |
Last modified: | April 7, 2021 | |
This is version 122 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |