UniProtKB - Q6IBN6 (Q6IBN6_HUMAN)
Protein
Submitted name:
CBX1 protein
Gene
CBX1
Organism
Homo sapiens (Human)
Status
Names & Taxonomyi
Protein namesi | Submitted name: CBX1 proteinImportedSubmitted name: Chromobox homolog 1 (HP1 beta homolog Drosophila ), isoform CRA_aImportedSubmitted name: cDNA, FLJ92997, Homo sapiens chromobox homolog 1 (HP1 beta homolog Drosophila ) (CBX1), mRNAImported |
Gene namesi | Name:CBX1Imported ORF Names:hCG_2000655Imported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Organism-specific databases
EuPathDBi | HostDB:ENSG00000108468.14 |
Expressioni
Gene expression databases
Bgeei | ENSG00000108468, Expressed in subventricular zone (outer) (primate) and 249 other tissues |
ExpressionAtlasi | Q6IBN6, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 21 – 79 | ChromoInterPro annotationAdd BLAST | 59 | |
Domaini | 117 – 175 | ChromoInterPro annotationAdd BLAST | 59 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 63 – 124 | DisorderedSequence analysisAdd BLAST | 62 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 72 – 116 | PolyampholyteSequence analysisAdd BLAST | 45 |
Phylogenomic databases
HOGENOMi | CLU_045874_1_0_1 |
OMAi | QTWEPED |
OrthoDBi | 1628171at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR016197, Chromo-like_dom_sf IPR000953, Chromo/chromo_shadow_dom IPR017984, Chromo_dom_subgr IPR023780, Chromo_domain IPR008251, Chromo_shadow_dom IPR023779, Chromodomain_CS |
Pfami | View protein in Pfam PF00385, Chromo, 1 hit PF01393, Chromo_shadow, 1 hit |
PRINTSi | PR00504, CHROMODOMAIN |
SMARTi | View protein in SMART SM00298, CHROMO, 2 hits SM00300, ChSh, 1 hit |
SUPFAMi | SSF54160, SSF54160, 2 hits |
PROSITEi | View protein in PROSITE PS00598, CHROMO_1, 1 hit PS50013, CHROMO_2, 2 hits |
i Sequence
Sequence statusi: Complete.
Q6IBN6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN
60 70 80 90 100
TWEPEENLDC PDLIAEFLQS QKTAHETDKS EGGKRKADSD SEDKGEESKP
110 120 130 140 150
KKKKEESEKP RGFARGLEPE RIIGATDSSG ELMFLMKWKN SDEADLVPAK
160 170 180
EANVKCPQVV ISFYEERLTW HSYPSEDDDK KDDKN
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AK312615 mRNA Translation: BAG35502.1 CR456766 mRNA Translation: CAG33047.1 CH471109 Genomic DNA Translation: EAW94758.1 CH471109 Genomic DNA Translation: EAW94759.1 CH471109 Genomic DNA Translation: EAW94760.1 CH471109 Genomic DNA Translation: EAW94761.1 |
RefSeqi | NP_001120700.1, NM_001127228.1 NP_006798.1, NM_006807.4 |
Genome annotation databases
GeneIDi | 10951 |
KEGGi | hsa:10951 |
UCSCi | uc002ind.4, human |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AK312615 mRNA Translation: BAG35502.1 CR456766 mRNA Translation: CAG33047.1 CH471109 Genomic DNA Translation: EAW94758.1 CH471109 Genomic DNA Translation: EAW94759.1 CH471109 Genomic DNA Translation: EAW94760.1 CH471109 Genomic DNA Translation: EAW94761.1 |
RefSeqi | NP_001120700.1, NM_001127228.1 NP_006798.1, NM_006807.4 |
3D structure databases
SMRi | Q6IBN6 |
ModBasei | Search... |
Chemistry databases
BindingDBi | Q6IBN6 |
Proteomic databases
MaxQBi | Q6IBN6 |
PRIDEi | Q6IBN6 |
Protocols and materials databases
Antibodypediai | 3221, 329 antibodies |
DNASUi | 10951 |
Genome annotation databases
GeneIDi | 10951 |
KEGGi | hsa:10951 |
UCSCi | uc002ind.4, human |
Organism-specific databases
CTDi | 10951 |
EuPathDBi | HostDB:ENSG00000108468.14 |
PharmGKBi | PA26126 |
Phylogenomic databases
HOGENOMi | CLU_045874_1_0_1 |
OMAi | QTWEPED |
OrthoDBi | 1628171at2759 |
Miscellaneous databases
BioGRID-ORCSi | 10951, 215 hits in 826 CRISPR screens |
ChiTaRSi | CBX1, human |
GenomeRNAii | 10951 |
Gene expression databases
Bgeei | ENSG00000108468, Expressed in subventricular zone (outer) (primate) and 249 other tissues |
ExpressionAtlasi | Q6IBN6, baseline and differential |
Family and domain databases
InterProi | View protein in InterPro IPR016197, Chromo-like_dom_sf IPR000953, Chromo/chromo_shadow_dom IPR017984, Chromo_dom_subgr IPR023780, Chromo_domain IPR008251, Chromo_shadow_dom IPR023779, Chromodomain_CS |
Pfami | View protein in Pfam PF00385, Chromo, 1 hit PF01393, Chromo_shadow, 1 hit |
PRINTSi | PR00504, CHROMODOMAIN |
SMARTi | View protein in SMART SM00298, CHROMO, 2 hits SM00300, ChSh, 1 hit |
SUPFAMi | SSF54160, SSF54160, 2 hits |
PROSITEi | View protein in PROSITE PS00598, CHROMO_1, 1 hit PS50013, CHROMO_2, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q6IBN6_HUMAN | |
Accessioni | Q6IBN6Primary (citable) accession number: Q6IBN6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 10, 2005 |
Last sequence update: | May 10, 2005 | |
Last modified: | December 2, 2020 | |
This is version 134 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |